RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 ESRGQ1W209 222 aa9.56□□□□□ -0.88
SNRPA-208ENST00000600456 CT83Q5H943 113 aa9.56□□□□□ -0.88
SNRPA-208ENST00000600456 NEGR1Q7Z3B1 354 aa9.56□□□□□ -0.88
SNRPA-208ENST00000600456 TPPP3Q9BW30 176 aa9.56□□□□□ -0.88
SNRPA-208ENST00000600456 JPT2Q9H910 190 aa9.56□□□□□ -0.88
SNRPA-208ENST00000600456 NAT8Q9UHE5 227 aa9.56□□□□□ -0.88
SNRPA-208ENST00000600456 MRPS16Q9Y3D3 137 aaKnown RBP9.56□□□□□ -0.88
SNRPA-208ENST00000600456 HYDINQ4G0P3 5121 aa9.56□□□□□ -0.88
SNRPA-208ENST00000600456 A0A087WWL8 130 aa9.55□□□□□ -0.88
SNRPA-208ENST00000600456 GATCO43716 136 aaKnown RBP9.55□□□□□ -0.88
SNRPA-208ENST00000600456 CTRLP40313 264 aa9.55□□□□□ -0.88
SNRPA-208ENST00000600456 SOHLH1Q5JUK2 328 aa9.55□□□□□ -0.88
SNRPA-208ENST00000600456 FAM74A4Q5TZK3 123 aa9.55□□□□□ -0.88
SNRPA-208ENST00000600456 WDR73Q6P4I2 378 aa9.55□□□□□ -0.88
SNRPA-208ENST00000600456 ZNRF2Q8NHG8 242 aa9.55□□□□□ -0.88
SNRPA-208ENST00000600456 AP1S3Q96PC3 154 aa9.55□□□□□ -0.88
SNRPA-208ENST00000600456 UPK3BQ9BT76 320 aa9.55□□□□□ -0.88
SNRPA-208ENST00000600456 A8MWL6 223 aa9.54□□□□□ -0.88
SNRPA-208ENST00000600456 OSTCQ9NRP0 149 aa9.54□□□□□ -0.88
SNRPA-208ENST00000600456 NACAE9PAV3 2078 aa9.54□□□□□ -0.88
SNRPA-208ENST00000600456 MUC21A0A0G2JKD1 596 aa9.53□□□□□ -0.88
SNRPA-208ENST00000600456 LOC100131303A0A0U1RQF7 123 aa9.53□□□□□ -0.88
SNRPA-208ENST00000600456 MUC21A0A140T8X8 626 aa9.53□□□□□ -0.88
SNRPA-208ENST00000600456 TIRAPP58753 221 aa9.53□□□□□ -0.88
SNRPA-208ENST00000600456 RPL23P62829 140 aaKnown RBP9.53□□□□□ -0.88
SNRPA-208ENST00000600456 LYPD5Q6UWN5 251 aa9.53□□□□□ -0.88
SNRPA-208ENST00000600456 LYZL1Q6UWQ5 148 aa9.53□□□□□ -0.88
SNRPA-208ENST00000600456 Q6ZSN1 163 aa9.53□□□□□ -0.88
SNRPA-208ENST00000600456 C15orf54Q8N8G6 183 aa9.53□□□□□ -0.88
SNRPA-208ENST00000600456 CNFNQ9BYD5 112 aa9.53□□□□□ -0.88
SNRPA-208ENST00000600456 TRBV10-1A0A0K0K1A3 114 aa9.52□□□□□ -0.89
SNRPA-208ENST00000600456 SMIM17P0DL12 118 aa9.52□□□□□ -0.89
SNRPA-208ENST00000600456 RAB4BP61018 213 aa9.52□□□□□ -0.89
SNRPA-208ENST00000600456 ISOC2Q96AB3 205 aa9.52□□□□□ -0.89
SNRPA-208ENST00000600456 FAM231BA6NCW3 169 aa9.51□□□□□ -0.89
SNRPA-208ENST00000600456 TRGC1P0CF51 173 aa9.51□□□□□ -0.89
SNRPA-208ENST00000600456 FOXA3P55318 350 aaPredicted RBP9.51□□□□□ -0.89
SNRPA-208ENST00000600456 SSTP61278 116 aa9.51□□□□□ -0.89
SNRPA-208ENST00000600456 ADIRFQ15847 76 aa9.51□□□□□ -0.89
SNRPA-208ENST00000600456 C14orf178Q8N769 122 aaPredicted RBP9.51□□□□□ -0.89
SNRPA-208ENST00000600456 TSKUQ8WUA8 353 aa9.51□□□□□ -0.89
SNRPA-208ENST00000600456 GTSF1Q8WW33 167 aa9.51□□□□□ -0.89
SNRPA-208ENST00000600456 GFRA4Q9GZZ7 299 aa9.51□□□□□ -0.89
SNRPA-208ENST00000600456 KIF25-AS1Q9Y6Z4 181 aa9.51□□□□□ -0.89
SNRPA-208ENST00000600456 DNAH6Q9C0G6 4158 aa9.51□□□□□ -0.89
SNRPA-208ENST00000600456 IGLV2-18A0A075B6J9 118 aa9.5□□□□□ -0.89
SNRPA-208ENST00000600456 LINC00694P0DN24 101 aa9.5□□□□□ -0.89
SNRPA-208ENST00000600456 NTF3P20783 257 aa9.5□□□□□ -0.89
SNRPA-208ENST00000600456 ZNF56Q15929 161 aa9.5□□□□□ -0.89
SNRPA-208ENST00000600456 Q6ZR54 194 aa9.5□□□□□ -0.89
SNRPA-208ENST00000600456 Q9H8V8 135 aa9.5□□□□□ -0.89
SNRPA-208ENST00000600456 MSRB1Q9NZV6 116 aa9.5□□□□□ -0.89
SNRPA-208ENST00000600456 LINC00315P59091 139 aa9.49□□□□□ -0.89
SNRPA-208ENST00000600456 UQCC3Q6UW78 93 aa9.49□□□□□ -0.89
SNRPA-208ENST00000600456 OR10G8Q8NGN5 311 aa9.49□□□□□ -0.89
SNRPA-208ENST00000600456 ATP6V0E2Q8NHE4 81 aa9.49□□□□□ -0.89
SNRPA-208ENST00000600456 BORCS7Q96B45 105 aa9.49□□□□□ -0.89
SNRPA-208ENST00000600456 V9GYV3 84 aa9.49□□□□□ -0.89
SNRPA-208ENST00000600456 NBDYA0A0U1RRE5 68 aa9.48□□□□□ -0.89
SNRPA-208ENST00000600456 GAGE12JA6NER3 117 aa9.48□□□□□ -0.89
SNRPA-208ENST00000600456 F5H697 171 aa9.48□□□□□ -0.89
SNRPA-208ENST00000600456 GAGE1Q13065 139 aa9.48□□□□□ -0.89
SNRPA-208ENST00000600456 GAGE4Q13068 117 aa9.48□□□□□ -0.89
SNRPA-208ENST00000600456 GAGE5Q13069 117 aa9.48□□□□□ -0.89
SNRPA-208ENST00000600456 TWIST1Q15672 202 aa9.48□□□□□ -0.89
SNRPA-208ENST00000600456 GAGE13Q4V321 117 aa9.48□□□□□ -0.89
SNRPA-208ENST00000600456 TTC32Q5I0X7 151 aa9.48□□□□□ -0.89
SNRPA-208ENST00000600456 DPH3P1Q9H4G8 78 aa9.48□□□□□ -0.89
SNRPA-208ENST00000600456 KMT2AQ03164 3969 aa9.47□□□□□ -0.89
SNRPA-208ENST00000600456 HIGD1CA8MV81 97 aa9.47□□□□□ -0.89
SNRPA-208ENST00000600456 H7C1H1 209 aa9.47□□□□□ -0.89
SNRPA-208ENST00000600456 M0R2N4 97 aa9.47□□□□□ -0.89
SNRPA-208ENST00000600456 SIVA1O15304 175 aa9.47□□□□□ -0.89
SNRPA-208ENST00000600456 RPL36AP83881 106 aaKnown RBP9.47□□□□□ -0.89
SNRPA-208ENST00000600456 PNRC1Q12796 327 aaPredicted RBP9.47□□□□□ -0.89
SNRPA-208ENST00000600456 RPL36ALQ969Q0 106 aaKnown RBP9.47□□□□□ -0.89
SNRPA-208ENST00000600456 PGLYRP4Q96LB8 373 aa9.47□□□□□ -0.89
SNRPA-208ENST00000600456 GTSF1LQ9H1H1 148 aa9.47□□□□□ -0.89
SNRPA-208ENST00000600456 TRBV7-3A0A075B6L6 115 aa9.46□□□□□ -0.9
SNRPA-208ENST00000600456 A0A087WWC5 75 aa9.46□□□□□ -0.9
SNRPA-208ENST00000600456 EVI2AP22794 236 aa9.46□□□□□ -0.9
SNRPA-208ENST00000600456 LELP1Q5T871 98 aa9.46□□□□□ -0.9
SNRPA-208ENST00000600456 SMIM15Q7Z3B0 74 aa9.46□□□□□ -0.9
SNRPA-208ENST00000600456 Q9UF83 564 aa9.46□□□□□ -0.9
SNRPA-208ENST00000600456 TRAV8-6A0A0B4J262 113 aa9.45□□□□□ -0.9
SNRPA-208ENST00000600456 A0A1B0GUT8 65 aa9.45□□□□□ -0.9
SNRPA-208ENST00000600456 K7EP13 123 aa9.45□□□□□ -0.9
SNRPA-208ENST00000600456 MGPP08493 103 aa9.45□□□□□ -0.9
SNRPA-208ENST00000600456 BTF3P20290 206 aaKnown RBP9.45□□□□□ -0.9
SNRPA-208ENST00000600456 NAT8BQ9UHF3 227 aa9.45□□□□□ -0.9
SNRPA-208ENST00000600456 M0QY20 66 aa9.44□□□□□ -0.9
SNRPA-208ENST00000600456 PPP1R2P9O14990 202 aa9.44□□□□□ -0.9
SNRPA-208ENST00000600456 DNAH10OSP0CZ25 163 aa9.44□□□□□ -0.9
SNRPA-208ENST00000600456 UBE2D3P61077 147 aa9.44□□□□□ -0.9
SNRPA-208ENST00000600456 UBE2D2P62837 147 aa9.44□□□□□ -0.9
SNRPA-208ENST00000600456 TRAV9-2A0A087WT02 112 aa9.43□□□□□ -0.9
SNRPA-208ENST00000600456 SMIM27A0A1W2PRY6 76 aa9.43□□□□□ -0.9
SNRPA-208ENST00000600456 OR10J3Q5JRS4 329 aa9.43□□□□□ -0.9
SNRPA-208ENST00000600456 SUMO4Q6EEV6 95 aa9.43□□□□□ -0.9
SNRPA-208ENST00000600456 LINC00336Q6ZUF6 198 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms