RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.54□□□□□ -2.32
SMAD4-207ENST00000589076 A0A0D9SG42 100 aa0.54□□□□□ -2.32
SMAD4-207ENST00000589076 BBIP1A8MTZ0 92 aa0.54□□□□□ -2.32
SMAD4-207ENST00000589076 RPL7P18124 248 aaKnown RBP0.54□□□□□ -2.32
SMAD4-207ENST00000589076 CRYGSP22914 178 aa0.54□□□□□ -2.32
SMAD4-207ENST00000589076 SPINT3P49223 89 aa0.54□□□□□ -2.32
SMAD4-207ENST00000589076 DNAJB13P59910 316 aa0.54□□□□□ -2.32
SMAD4-207ENST00000589076 LSM3P62310 102 aaKnown RBP0.54□□□□□ -2.32
SMAD4-207ENST00000589076 TMEM128Q5BJH2 165 aa0.54□□□□□ -2.32
SMAD4-207ENST00000589076 C3orf62Q6ZUJ4 267 aa0.54□□□□□ -2.32
SMAD4-207ENST00000589076 OR51A4Q8NGJ6 313 aa0.54□□□□□ -2.32
SMAD4-207ENST00000589076 NABP2Q9BQ15 211 aa0.54□□□□□ -2.32
SMAD4-207ENST00000589076 CBLN4Q9NTU7 201 aa0.54□□□□□ -2.32
SMAD4-207ENST00000589076 MPC1Q9Y5U8 109 aa0.54□□□□□ -2.32
SMAD4-207ENST00000589076 SPTBN1Q01082 2364 aaKnown RBP0.54□□□□□ -2.32
SMAD4-207ENST00000589076 PKD1P98161 4303 aa0.54□□□□□ -2.32
SMAD4-207ENST00000589076 TMEM131LA2VDJ0 1609 aa0.53□□□□□ -2.32
SMAD4-207ENST00000589076 ALKQ9UM73 1620 aa0.53□□□□□ -2.32
SMAD4-207ENST00000589076 IFITM5A6NNB3 132 aa0.53□□□□□ -2.32
SMAD4-207ENST00000589076 GYPBP06028 91 aa0.53□□□□□ -2.32
SMAD4-207ENST00000589076 RPS3P23396 243 aaKnown RBP eCLIP0.53□□□□□ -2.321e-8■■■■□ 23.6
SMAD4-207ENST00000589076 S100GP29377 79 aa0.53□□□□□ -2.32
SMAD4-207ENST00000589076 ETV6P41212 452 aa0.53□□□□□ -2.32
SMAD4-207ENST00000589076 ZNF137PP52743 207 aa0.53□□□□□ -2.32
SMAD4-207ENST00000589076 TMEM229BQ8NBD8 167 aa0.53□□□□□ -2.32
SMAD4-207ENST00000589076 NAT14Q8WUY8 206 aa0.53□□□□□ -2.32
SMAD4-207ENST00000589076 CCDC115Q96NT0 180 aa0.53□□□□□ -2.32
SMAD4-207ENST00000589076 C19orf12Q9NSK7 152 aa0.53□□□□□ -2.32
SMAD4-207ENST00000589076 FKBP11Q9NYL4 201 aa0.53□□□□□ -2.32
SMAD4-207ENST00000589076 JPT1Q9UK76 154 aa0.53□□□□□ -2.32
SMAD4-207ENST00000589076 DSPPQ9NZW4 1301 aa0.53□□□□□ -2.32
SMAD4-207ENST00000589076 TET3O43151 1660 aa0.53□□□□□ -2.33
SMAD4-207ENST00000589076 COL4A6Q14031 1691 aa0.53□□□□□ -2.33
SMAD4-207ENST00000589076 DYNC2H1Q8NCM8 4307 aaKnown RBP0.52□□□□□ -2.33
SMAD4-207ENST00000589076 A0A1W2PPB8 328 aa0.52□□□□□ -2.33
SMAD4-207ENST00000589076 A0A1W2PRS3 328 aa0.52□□□□□ -2.33
SMAD4-207ENST00000589076 PRORSD1PA6NEY8 169 aa0.52□□□□□ -2.33
SMAD4-207ENST00000589076 KIR3DP1A8MWS1 328 aa0.52□□□□□ -2.33
SMAD4-207ENST00000589076 EDF1O60869 148 aaKnown RBP0.52□□□□□ -2.33
SMAD4-207ENST00000589076 SNRPD3P62318 126 aaKnown RBP0.52□□□□□ -2.33
SMAD4-207ENST00000589076 XAF1Q6GPH4 301 aa0.52□□□□□ -2.33
SMAD4-207ENST00000589076 OR5A2Q8NGI9 324 aa0.52□□□□□ -2.33
SMAD4-207ENST00000589076 SKA2Q8WVK7 121 aaPredicted RBP0.52□□□□□ -2.33
SMAD4-207ENST00000589076 ANK2Q01484 3957 aa0.52□□□□□ -2.33
SMAD4-207ENST00000589076 EFCAB6Q5THR3 1501 aa0.52□□□□□ -2.33
SMAD4-207ENST00000589076 CFAP43Q8NDM7 1665 aa0.52□□□□□ -2.33
SMAD4-207ENST00000589076 HELZP42694 1942 aaKnown RBP0.52□□□□□ -2.33
SMAD4-207ENST00000589076 LOC107984156A0A0G2JMH3 177 aa0.51□□□□□ -2.33
SMAD4-207ENST00000589076 TSTD3H0UI37 97 aa0.51□□□□□ -2.33
SMAD4-207ENST00000589076 DMDP11532 3685 aa0.51□□□□□ -2.33
SMAD4-207ENST00000589076 SLC25A4P12235 298 aa0.51□□□□□ -2.33
SMAD4-207ENST00000589076 KDELR1P24390 212 aa0.51□□□□□ -2.33
SMAD4-207ENST00000589076 RPL22P35268 128 aaKnown RBP0.51□□□□□ -2.33
SMAD4-207ENST00000589076 CAV3P56539 151 aa0.51□□□□□ -2.33
SMAD4-207ENST00000589076 C6orf52Q5T4I8 152 aa0.51□□□□□ -2.33
SMAD4-207ENST00000589076 C10orf99Q6UWK7 81 aa0.51□□□□□ -2.33
SMAD4-207ENST00000589076 ARL17AQ8IVW1 177 aa0.51□□□□□ -2.33
SMAD4-207ENST00000589076 TMEM35BQ8NCS4 154 aa0.51□□□□□ -2.33
SMAD4-207ENST00000589076 OR8J3Q8NGG0 315 aa0.51□□□□□ -2.33
SMAD4-207ENST00000589076 BRK1Q8WUW1 75 aa0.51□□□□□ -2.33
SMAD4-207ENST00000589076 PRO3102Q9H379 93 aa0.51□□□□□ -2.33
SMAD4-207ENST00000589076 DLEC1Q9Y238 1755 aa0.51□□□□□ -2.33
SMAD4-207ENST00000589076 MAP2P11137 1827 aaKnown RBP0.5□□□□□ -2.33
SMAD4-207ENST00000589076 KIDINS220Q9ULH0 1771 aa0.5□□□□□ -2.33
SMAD4-207ENST00000589076 MED23Q9ULK4 1368 aa0.5□□□□□ -2.33
SMAD4-207ENST00000589076 M0QZK8 103 aa0.5□□□□□ -2.33
SMAD4-207ENST00000589076 HBDP02042 147 aa0.5□□□□□ -2.33
SMAD4-207ENST00000589076 GTF2A1P52655 376 aaPredicted RBP0.5□□□□□ -2.33
SMAD4-207ENST00000589076 BLCAPP62952 87 aa0.5□□□□□ -2.33
SMAD4-207ENST00000589076 QRFPP83859 136 aa0.5□□□□□ -2.33
SMAD4-207ENST00000589076 ASB16-AS1Q495Z4 193 aa0.5□□□□□ -2.33
SMAD4-207ENST00000589076 CSAG1Q6PB30 78 aa0.5□□□□□ -2.33
SMAD4-207ENST00000589076 PLAC4Q8WY50 150 aa0.5□□□□□ -2.33
SMAD4-207ENST00000589076 SMIM7Q9BQ49 75 aa0.5□□□□□ -2.33
SMAD4-207ENST00000589076 MRPL35Q9NZE8 188 aaKnown RBP0.5□□□□□ -2.33
SMAD4-207ENST00000589076 NDUFAF1Q9Y375 327 aa0.5□□□□□ -2.33
SMAD4-207ENST00000589076 CMYA5Q8N3K9 4069 aa0.5□□□□□ -2.33
SMAD4-207ENST00000589076 PLXNA2O75051 1894 aa0.5□□□□□ -2.33
SMAD4-207ENST00000589076 UNC13AQ9UPW8 1703 aa0.5□□□□□ -2.33
SMAD4-207ENST00000589076 RREB1Q92766 1687 aa0.49□□□□□ -2.33
SMAD4-207ENST00000589076 OVOS2A0A0G2JMS6 1433 aa0.49□□□□□ -2.33
SMAD4-207ENST00000589076 ESPL1Q14674 2120 aa0.49□□□□□ -2.33
SMAD4-207ENST00000589076 J3KT08 172 aa0.49□□□□□ -2.33
SMAD4-207ENST00000589076 UQCRQO14949 82 aa0.49□□□□□ -2.33
SMAD4-207ENST00000589076 IGF2P01344 180 aa0.49□□□□□ -2.33
SMAD4-207ENST00000589076 EVI2AP22794 236 aa0.49□□□□□ -2.33
SMAD4-207ENST00000589076 PLAC8Q9NZF1 115 aa0.49□□□□□ -2.33
SMAD4-207ENST00000589076 HSPB11Q9Y547 144 aa0.49□□□□□ -2.33
SMAD4-207ENST00000589076 VIRMAQ69YN4 1812 aaKnown RBP0.49□□□□□ -2.33
SMAD4-207ENST00000589076 RALGAPBQ86X10 1494 aa0.48□□□□□ -2.33
SMAD4-207ENST00000589076 PNMA8CA0A1B0GUJ8 204 aa0.48□□□□□ -2.33
SMAD4-207ENST00000589076 GNG14A0A1W2PPG7 69 aa0.48□□□□□ -2.33
SMAD4-207ENST00000589076 TMEM30CPA0ZSE6 113 aa0.48□□□□□ -2.33
SMAD4-207ENST00000589076 TMEM189A5PLL7 270 aa0.48□□□□□ -2.33
SMAD4-207ENST00000589076 H0YJX3 145 aa0.48□□□□□ -2.33
SMAD4-207ENST00000589076 CKS2P33552 79 aa0.48□□□□□ -2.33
SMAD4-207ENST00000589076 LYSTQ99698 3801 aa0.48□□□□□ -2.33
SMAD4-207ENST00000589076 GINS2Q9Y248 185 aa0.48□□□□□ -2.33
SMAD4-207ENST00000589076 MAPKBP1O60336 1514 aa0.48□□□□□ -2.33
SMAD4-207ENST00000589076 PTPRGP23470 1445 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms