RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 CRYGDP07320 174 aa1.34□□□□□ -2.19
PTP4A1-204ENST00000578299 CD7P09564 240 aa1.34□□□□□ -2.19
PTP4A1-204ENST00000578299 IGLC6P0CF74 106 aa1.34□□□□□ -2.19
PTP4A1-204ENST00000578299 IGHV3-43DP0DP04 118 aa1.34□□□□□ -2.19
PTP4A1-204ENST00000578299 ORM2P19652 201 aa1.34□□□□□ -2.19
PTP4A1-204ENST00000578299 CXCL5P42830 114 aa1.34□□□□□ -2.19
PTP4A1-204ENST00000578299 SSR4P51571 173 aa1.34□□□□□ -2.19
PTP4A1-204ENST00000578299 EMP1P54849 157 aa1.34□□□□□ -2.19
PTP4A1-204ENST00000578299 LINC00315P59091 139 aa1.34□□□□□ -2.19
PTP4A1-204ENST00000578299 C4orf26Q17RF5 130 aa1.34□□□□□ -2.19
PTP4A1-204ENST00000578299 MRPL51Q4U2R6 128 aaKnown RBP1.34□□□□□ -2.19
PTP4A1-204ENST00000578299 TMEM155Q4W5P6 130 aa1.34□□□□□ -2.19
PTP4A1-204ENST00000578299 HES3Q5TGS1 186 aa1.34□□□□□ -2.19
PTP4A1-204ENST00000578299 CEMP1Q6PRD7 247 aaPredicted RBP1.34□□□□□ -2.19
PTP4A1-204ENST00000578299 ZFP2Q6ZN57 461 aa1.34□□□□□ -2.19
PTP4A1-204ENST00000578299 MDP1Q86V88 176 aa1.34□□□□□ -2.19
PTP4A1-204ENST00000578299 ARL17AQ8IVW1 177 aa1.34□□□□□ -2.19
PTP4A1-204ENST00000578299 AMN1Q8IY45 258 aa1.34□□□□□ -2.19
PTP4A1-204ENST00000578299 VKORC1L1Q8N0U8 176 aa1.34□□□□□ -2.19
PTP4A1-204ENST00000578299 ORMDL3Q8N138 153 aa1.34□□□□□ -2.19
PTP4A1-204ENST00000578299 C10orf126Q8N4M7 172 aa1.34□□□□□ -2.19
PTP4A1-204ENST00000578299 WDR31Q8NA23 367 aa1.34□□□□□ -2.19
PTP4A1-204ENST00000578299 OR1L4Q8NGR5 311 aa1.34□□□□□ -2.19
PTP4A1-204ENST00000578299 ZNRF2Q8NHG8 242 aa1.34□□□□□ -2.19
PTP4A1-204ENST00000578299 FAM57AQ8TBR7 257 aa1.34□□□□□ -2.19
PTP4A1-204ENST00000578299 MYOZ3Q8TDC0 251 aa1.34□□□□□ -2.19
PTP4A1-204ENST00000578299 SLC37A2Q8TED4 501 aa1.34□□□□□ -2.19
PTP4A1-204ENST00000578299 UBE2WQ96B02 151 aa1.34□□□□□ -2.19
PTP4A1-204ENST00000578299 LINC00526Q96FQ7 95 aa1.34□□□□□ -2.19
PTP4A1-204ENST00000578299 DSCR8Q96T75 97 aa1.34□□□□□ -2.19
PTP4A1-204ENST00000578299 TRGV9Q99603 122 aa1.34□□□□□ -2.19
PTP4A1-204ENST00000578299 PLA2G2FQ9BZM2 168 aa1.34□□□□□ -2.19
PTP4A1-204ENST00000578299 OR2H1Q9GZK4 316 aa1.34□□□□□ -2.19
PTP4A1-204ENST00000578299 SPANXA1Q9NS26 97 aa1.34□□□□□ -2.19
PTP4A1-204ENST00000578299 MRPL35Q9NZE8 188 aaKnown RBP1.34□□□□□ -2.19
PTP4A1-204ENST00000578299 HHLA3Q9XRX5 114 aa1.34□□□□□ -2.19
PTP4A1-204ENST00000578299 VCANP13611 3396 aa1.34□□□□□ -2.2
PTP4A1-204ENST00000578299 DYSFO75923 2080 aa1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 HEATR1Q9H583 2144 aaKnown RBP1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 IGLV4-60A0A075B6I1 120 aa1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 IGKV1D-37A0A075B6S9 117 aa1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 IGHV3OR15-7A0A075B7D8 119 aa1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 TRAV40A0A0B4J280 105 aa1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 TEX49A0A1B0GTD5 131 aa1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 FAM240AA0A1B0GVK7 77 aa1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 TINCRA0A1B0GVN0 87 aa1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 hADV29S1A0JD25 119 aa1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 TMEM30CPA0ZSE6 113 aa1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 LINC01546A6NGU7 62 aa1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 NCBP2LA6PVI3 153 aaKnown RBP1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 J3QT63 122 aa1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 OVOL1O14753 267 aa1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 UQCRQO14949 82 aa1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 TIMM8AO60220 97 aaPredicted RBP1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 COX7A2P2O60397 106 aa1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 NDUFA3O95167 84 aa1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 TFF1P04155 84 aa1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 P0DMU3 169 aa1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 FAM231AP0DMU4 169 aa1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 FAM231CP0DMU5 169 aa1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 PRB4P10163 310 aaPredicted RBP1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 COX6B1P14854 86 aa1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 SLC25A16P16260 332 aa1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 CNTFRP26992 372 aa1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 GFERP55789 205 aa1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 TSPEAR-AS2P59090 65 aa1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 TMEM258P61165 79 aa1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 HSPE1P61604 102 aaKnown RBP1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 HIST1H4AP62805 103 aaKnown RBP1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 RPS21P63220 83 aaKnown RBP1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 PLGLB1Q02325 96 aa1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 ZNF56Q15929 161 aa1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 POU2AF1Q16633 256 aa1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 DEFB116Q30KQ4 102 aa1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 RPL39P5Q59GN2 51 aa1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 PSMG4Q5JS54 123 aa1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 FAM27BQ5VT28 67 aa1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 C10orf113Q5VZT2 155 aa1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 FAM104BQ5XKR9 115 aa1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 DUX4L9Q6RFH8 374 aaPredicted RBP1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 PATE2Q6UY27 113 aa1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 SLC25A48Q6ZT89 311 aaKnown RBP1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 PRNTQ86SH4 94 aa1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 WDR86Q86TI4 376 aa1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 NDUFA11Q86Y39 141 aa1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 PDPNQ86YL7 162 aa1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 OR4C13Q8NGP0 309 aa1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 SMCR5Q8TEV8 140 aa1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 FMC1Q96HJ9 113 aa1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 FAM19A4Q96LR4 140 aa1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 RTL8AQ9BWD3 113 aa1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 MRPL20Q9BYC9 149 aaKnown RBP1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 OTORQ9NRC9 128 aa1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 MRPL36Q9P0J6 103 aaKnown RBP1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 LINC00527Q9UJ94 153 aa1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 PRNDQ9UKY0 176 aa1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 CHCHD2Q9Y6H1 151 aaPredicted RBP1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 SPENQ96T58 3664 aaKnown RBP1.33□□□□□ -2.2
PTP4A1-204ENST00000578299 RANBP2P49792 3224 aaKnown RBP1.32□□□□□ -2.2
PTP4A1-204ENST00000578299 CABIN1Q9Y6J0 2220 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms