RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 GNRH2O43555 120 aa7.13□□□□□ -1.27
SF3B3-207ENST00000566095 GIG44P09565 113 aaPredicted RBP7.13□□□□□ -1.27
SF3B3-207ENST00000566095 DAZ2Q13117 558 aaKnown RBP7.13□□□□□ -1.27
SF3B3-207ENST00000566095 OR11H2Q8NH07 326 aa7.13□□□□□ -1.27
SF3B3-207ENST00000566095 HIST1H2BLQ99880 126 aa7.13□□□□□ -1.27
SF3B3-207ENST00000566095 C20orf78Q9BR46 151 aa7.13□□□□□ -1.27
SF3B3-207ENST00000566095 NXT2Q9NPJ8 142 aaKnown RBP7.13□□□□□ -1.27
SF3B3-207ENST00000566095 TCAPO15273 167 aa7.12□□□□□ -1.27
SF3B3-207ENST00000566095 RBMY1A1P0DJD3 496 aaKnown RBP7.12□□□□□ -1.27
SF3B3-207ENST00000566095 RBMY1CP0DJD4 496 aa7.12□□□□□ -1.27
SF3B3-207ENST00000566095 G0S2P27469 103 aa7.12□□□□□ -1.27
SF3B3-207ENST00000566095 RBMY1FQ15415 496 aaKnown RBP7.12□□□□□ -1.27
SF3B3-207ENST00000566095 OR10AG1Q8NH19 301 aa7.12□□□□□ -1.27
SF3B3-207ENST00000566095 MRAPQ8TCY5 172 aa7.12□□□□□ -1.27
SF3B3-207ENST00000566095 RNASE8Q8TDE3 154 aaKnown RBP7.12□□□□□ -1.27
SF3B3-207ENST00000566095 LYRM9A8MSI8 78 aa7.11□□□□□ -1.27
SF3B3-207ENST00000566095 LINC00614P0C842 121 aa7.11□□□□□ -1.27
SF3B3-207ENST00000566095 CKS2P33552 79 aa7.11□□□□□ -1.27
SF3B3-207ENST00000566095 ZNF876PQ49A33 203 aa7.11□□□□□ -1.27
SF3B3-207ENST00000566095 MRPL51Q4U2R6 128 aaKnown RBP7.11□□□□□ -1.27
SF3B3-207ENST00000566095 RNF185Q96GF1 192 aa7.11□□□□□ -1.27
SF3B3-207ENST00000566095 PRELID3AQ96N28 172 aa7.11□□□□□ -1.27
SF3B3-207ENST00000566095 MGAM2Q2M2H8 2515 aa7.11□□□□□ -1.27
SF3B3-207ENST00000566095 TRRAPQ9Y4A5 3859 aa7.1□□□□□ -1.27
SF3B3-207ENST00000566095 H7C1H1 209 aa7.1□□□□□ -1.27
SF3B3-207ENST00000566095 K7EIL1 84 aa7.1□□□□□ -1.27
SF3B3-207ENST00000566095 HSBP1O75506 76 aa7.1□□□□□ -1.27
SF3B3-207ENST00000566095 SERF1AO75920 110 aa7.1□□□□□ -1.27
SF3B3-207ENST00000566095 ZFP2Q6ZN57 461 aa7.1□□□□□ -1.27
SF3B3-207ENST00000566095 AMN1Q8IY45 258 aa7.1□□□□□ -1.27
SF3B3-207ENST00000566095 RASL10AQ92737 203 aa7.1□□□□□ -1.27
SF3B3-207ENST00000566095 OVOL2Q9BRP0 275 aa7.1□□□□□ -1.27
SF3B3-207ENST00000566095 AP5S1Q9NUS5 200 aa7.1□□□□□ -1.27
SF3B3-207ENST00000566095 MDFICQ9P1T7 246 aa7.1□□□□□ -1.27
SF3B3-207ENST00000566095 KIF25-AS1Q9Y6Z4 181 aa7.1□□□□□ -1.27
SF3B3-207ENST00000566095 TRGV2A0A075B6R0 118 aa7.09□□□□□ -1.27
SF3B3-207ENST00000566095 TRGV1A0A0A0MS02 117 aa7.09□□□□□ -1.27
SF3B3-207ENST00000566095 TRBV6-5A0A0K0K1A5 114 aa7.09□□□□□ -1.27
SF3B3-207ENST00000566095 IFITM10A6NMD0 228 aa7.09□□□□□ -1.27
SF3B3-207ENST00000566095 D6R8Y8 96 aa7.09□□□□□ -1.27
SF3B3-207ENST00000566095 NHLRC4P0CG21 123 aaPredicted RBP7.09□□□□□ -1.27
SF3B3-207ENST00000566095 AZU1P20160 251 aa7.09□□□□□ -1.27
SF3B3-207ENST00000566095 EVI2AP22794 236 aa7.09□□□□□ -1.27
SF3B3-207ENST00000566095 LINC00310P59036 64 aa7.09□□□□□ -1.27
SF3B3-207ENST00000566095 JOSD1Q15040 202 aaPredicted RBP7.09□□□□□ -1.27
SF3B3-207ENST00000566095 KIAA1644Q3SXP7 199 aa7.09□□□□□ -1.27
SF3B3-207ENST00000566095 Q6ZQT7 251 aa7.09□□□□□ -1.27
SF3B3-207ENST00000566095 NIT1Q86X76 327 aa7.09□□□□□ -1.27
SF3B3-207ENST00000566095 C11orf72Q8NBR9 251 aa7.09□□□□□ -1.27
SF3B3-207ENST00000566095 IL17DQ8TAD2 202 aa7.09□□□□□ -1.27
SF3B3-207ENST00000566095 C18orf15Q96N68 181 aa7.09□□□□□ -1.27
SF3B3-207ENST00000566095 C11orf68Q9H3H3 251 aaKnown RBP7.09□□□□□ -1.27
SF3B3-207ENST00000566095 MAP1LC3AQ9H492 121 aa7.09□□□□□ -1.27
SF3B3-207ENST00000566095 SPART-AS1P0CW21 52 aa7.08□□□□□ -1.28
SF3B3-207ENST00000566095 FABP4P15090 132 aa7.08□□□□□ -1.28
SF3B3-207ENST00000566095 SPATA12Q7Z6I5 190 aa7.08□□□□□ -1.28
SF3B3-207ENST00000566095 LINC00518Q8N0U6 118 aa7.08□□□□□ -1.28
SF3B3-207ENST00000566095 PRSS3P2Q8NHM4 247 aa7.08□□□□□ -1.28
SF3B3-207ENST00000566095 B9D2Q9BPU9 175 aa7.08□□□□□ -1.28
SF3B3-207ENST00000566095 SAMD10Q9BYL1 202 aa7.08□□□□□ -1.28
SF3B3-207ENST00000566095 NOP10Q9NPE3 64 aaKnown RBP7.08□□□□□ -1.28
SF3B3-207ENST00000566095 MSRB1Q9NZV6 116 aa7.08□□□□□ -1.28
SF3B3-207ENST00000566095 X6R8D5 127 aa7.08□□□□□ -1.28
SF3B3-207ENST00000566095 TRAV4A0A0B4J268 109 aa7.07□□□□□ -1.28
SF3B3-207ENST00000566095 IGHV4-28A0A0C4DH34 117 aa7.07□□□□□ -1.28
SF3B3-207ENST00000566095 TNFRSF6BO95407 300 aa7.07□□□□□ -1.28
SF3B3-207ENST00000566095 EMP1P54849 157 aa7.07□□□□□ -1.28
SF3B3-207ENST00000566095 LINC00315P59091 139 aa7.07□□□□□ -1.28
SF3B3-207ENST00000566095 SSTP61278 116 aa7.07□□□□□ -1.28
SF3B3-207ENST00000566095 IQCJQ1A5X6 159 aa7.07□□□□□ -1.28
SF3B3-207ENST00000566095 FA2HQ7L5A8 372 aa7.07□□□□□ -1.28
SF3B3-207ENST00000566095 Q8N8P6 123 aa7.07□□□□□ -1.28
SF3B3-207ENST00000566095 OR4C5Q8NGB2 326 aa7.07□□□□□ -1.28
SF3B3-207ENST00000566095 TM2D3Q9BRN9 247 aa7.07□□□□□ -1.28
SF3B3-207ENST00000566095 HSPB8Q9UJY1 196 aa7.07□□□□□ -1.28
SF3B3-207ENST00000566095 PKD1L1Q8TDX9 2849 aa7.07□□□□□ -1.28
SF3B3-207ENST00000566095 MUC21A0A0G2JKD1 596 aa7.06□□□□□ -1.28
SF3B3-207ENST00000566095 MUC21A0A140T8X8 626 aa7.06□□□□□ -1.28
SF3B3-207ENST00000566095 F5H697 171 aa7.06□□□□□ -1.28
SF3B3-207ENST00000566095 PRB2P02812 416 aaPredicted RBP7.06□□□□□ -1.28
SF3B3-207ENST00000566095 MGPP08493 103 aa7.06□□□□□ -1.28
SF3B3-207ENST00000566095 AMTP48728 403 aa7.06□□□□□ -1.28
SF3B3-207ENST00000566095 DAD1P61803 113 aa7.06□□□□□ -1.28
SF3B3-207ENST00000566095 ZNF56Q15929 161 aa7.06□□□□□ -1.28
SF3B3-207ENST00000566095 NRACQ8N912 160 aa7.06□□□□□ -1.28
SF3B3-207ENST00000566095 Q8NAQ8 132 aa7.06□□□□□ -1.28
SF3B3-207ENST00000566095 OR10D4PQ8NGN7 298 aa7.06□□□□□ -1.28
SF3B3-207ENST00000566095 MRPL16Q9NX20 251 aaKnown RBP7.06□□□□□ -1.28
SF3B3-207ENST00000566095 RS1O15537 224 aa7.05□□□□□ -1.28
SF3B3-207ENST00000566095 CRYGDP07320 174 aa7.05□□□□□ -1.28
SF3B3-207ENST00000566095 SUMO2P61956 95 aaKnown RBP7.05□□□□□ -1.28
SF3B3-207ENST00000566095 ORMDL2Q53FV1 153 aa7.05□□□□□ -1.28
SF3B3-207ENST00000566095 FAM74A4Q5TZK3 123 aa7.05□□□□□ -1.28
SF3B3-207ENST00000566095 SBSPONQ8IVN8 264 aa7.05□□□□□ -1.28
SF3B3-207ENST00000566095 C14orf178Q8N769 122 aaPredicted RBP7.05□□□□□ -1.28
SF3B3-207ENST00000566095 DNAJC30Q96LL9 226 aa7.05□□□□□ -1.28
SF3B3-207ENST00000566095 NOTCH1P46531 2555 aa7.05□□□□□ -1.28
SF3B3-207ENST00000566095 IGLV2-18A0A075B6J9 118 aa7.04□□□□□ -1.28
SF3B3-207ENST00000566095 TRBV27A0A0K0K1C4 114 aa7.04□□□□□ -1.28
SF3B3-207ENST00000566095 GAGE12BA1L429 117 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms