RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 RAI1Q7Z5J4 1906 aaPredicted RBP4.01□□□□□ -1.77
SMG1-211ENST00000565324 A0A0G2JNJ9 132 aa4□□□□□ -1.77
SMG1-211ENST00000565324 RNASE13Q5GAN3 156 aaKnown RBP4□□□□□ -1.77
SMG1-211ENST00000565324 FANCD2OSQ96PS1 177 aa4□□□□□ -1.77
SMG1-211ENST00000565324 Q9UFV3 132 aa4□□□□□ -1.77
SMG1-211ENST00000565324 WDR87Q6ZQQ6 2873 aa4□□□□□ -1.77
SMG1-211ENST00000565324 CLPSL2Q6UWE3 100 aa4□□□□□ -1.77
SMG1-211ENST00000565324 IGHV4-4A0A075B6R2 117 aa4□□□□□ -1.77
SMG1-211ENST00000565324 TRAV23DV6A0A075B6W5 121 aa4□□□□□ -1.77
SMG1-211ENST00000565324 SPATA12Q7Z6I5 190 aa4□□□□□ -1.77
SMG1-211ENST00000565324 NDUFA11Q86Y39 141 aa4□□□□□ -1.77
SMG1-211ENST00000565324 GNLYP22749 145 aa4□□□□□ -1.77
SMG1-211ENST00000565324 C16orf74Q96GX8 76 aa4□□□□□ -1.77
SMG1-211ENST00000565324 SEM1Q6ZVN7 128 aa4□□□□□ -1.77
SMG1-211ENST00000565324 MPLKIPQ8TAP9 179 aa4□□□□□ -1.77
SMG1-211ENST00000565324 FAM110AQ9BQ89 295 aa4□□□□□ -1.77
SMG1-211ENST00000565324 WIPF3A6NGB9 483 aa4□□□□□ -1.77
SMG1-211ENST00000565324 BPY2O14599 106 aa4□□□□□ -1.77
SMG1-211ENST00000565324 C16orf54Q6UWD8 224 aa4□□□□□ -1.77
SMG1-211ENST00000565324 PRR20EP86478 221 aa4□□□□□ -1.77
SMG1-211ENST00000565324 PRR20CP86479 221 aa4□□□□□ -1.77
SMG1-211ENST00000565324 PRR20DP86480 221 aa4□□□□□ -1.77
SMG1-211ENST00000565324 PRR20BP86481 221 aa4□□□□□ -1.77
SMG1-211ENST00000565324 PRR20AP86496 221 aa4□□□□□ -1.77
SMG1-211ENST00000565324 SPG11Q96JI7 2443 aa3.99□□□□□ -1.77
SMG1-211ENST00000565324 WI2-2373I1.2A0A1W2PRP0 233 aa3.99□□□□□ -1.77
SMG1-211ENST00000565324 PRB2P02812 416 aaPredicted RBP3.99□□□□□ -1.77
SMG1-211ENST00000565324 LYPD2Q6UXB3 125 aa3.99□□□□□ -1.77
SMG1-211ENST00000565324 BPESC1Q9GZL8 116 aa3.99□□□□□ -1.77
SMG1-211ENST00000565324 H0Y9J4 135 aa3.99□□□□□ -1.77
SMG1-211ENST00000565324 LECT2O14960 151 aa3.99□□□□□ -1.77
SMG1-211ENST00000565324 FAM19A3Q7Z5A8 133 aa3.99□□□□□ -1.77
SMG1-211ENST00000565324 C20orf197Q8N268 126 aa3.99□□□□□ -1.77
SMG1-211ENST00000565324 ZNF491Q8N8L2 437 aa3.99□□□□□ -1.77
SMG1-211ENST00000565324 NDUFA7O95182 113 aa3.99□□□□□ -1.77
SMG1-211ENST00000565324 PTH2Q96A98 100 aa3.99□□□□□ -1.77
SMG1-211ENST00000565324 TEX49A0A1B0GTD5 131 aa3.99□□□□□ -1.77
SMG1-211ENST00000565324 A6NED7 52 aa3.99□□□□□ -1.77
SMG1-211ENST00000565324 MIAQ16674 131 aa3.99□□□□□ -1.77
SMG1-211ENST00000565324 SERP2Q8N6R1 65 aa3.99□□□□□ -1.77
SMG1-211ENST00000565324 PRB1P04280 392 aa3.99□□□□□ -1.77
SMG1-211ENST00000565324 B3GALT5-AS1P59052 145 aa3.99□□□□□ -1.77
SMG1-211ENST00000565324 MLANAQ16655 118 aa3.99□□□□□ -1.77
SMG1-211ENST00000565324 WISP1O95388 367 aa3.99□□□□□ -1.77
SMG1-211ENST00000565324 HIST2H2BDQ6DRA6 164 aa3.99□□□□□ -1.77
SMG1-211ENST00000565324 RNF183Q96D59 192 aa3.98□□□□□ -1.77
SMG1-211ENST00000565324 NOP10Q9NPE3 64 aaKnown RBP3.98□□□□□ -1.77
SMG1-211ENST00000565324 MDFICQ9P1T7 246 aa3.98□□□□□ -1.77
SMG1-211ENST00000565324 CCL18P55774 89 aa3.98□□□□□ -1.77
SMG1-211ENST00000565324 LINC00205P59089 165 aa3.98□□□□□ -1.77
SMG1-211ENST00000565324 ANKRD39Q53RE8 183 aa3.98□□□□□ -1.77
SMG1-211ENST00000565324 C5orf38Q86SI9 138 aa3.98□□□□□ -1.77
SMG1-211ENST00000565324 CRIPAKQ8N1N5 446 aa3.98□□□□□ -1.77
SMG1-211ENST00000565324 RPL39LQ96EH5 51 aaKnown RBP3.98□□□□□ -1.77
SMG1-211ENST00000565324 B9D2Q9BPU9 175 aa3.98□□□□□ -1.77
SMG1-211ENST00000565324 KAAG1Q9UBP8 84 aa3.98□□□□□ -1.77
SMG1-211ENST00000565324 C15orf65H3BRN8 121 aa3.98□□□□□ -1.77
SMG1-211ENST00000565324 A0A0J9YXY3 114 aa3.98□□□□□ -1.77
SMG1-211ENST00000565324 C14orf177Q52M58 125 aa3.98□□□□□ -1.77
SMG1-211ENST00000565324 AGPAT4-IT1Q9H0P7 198 aa3.98□□□□□ -1.77
SMG1-211ENST00000565324 CLEC2BQ92478 149 aa3.98□□□□□ -1.77
SMG1-211ENST00000565324 TEX22C9J3V5 150 aa3.98□□□□□ -1.77
SMG1-211ENST00000565324 GNRH2O43555 120 aa3.98□□□□□ -1.77
SMG1-211ENST00000565324 C17orf58Q2M2W7 97 aa3.98□□□□□ -1.77
SMG1-211ENST00000565324 LRRC75A-AS1Q8N1F1 130 aa3.98□□□□□ -1.77
SMG1-211ENST00000565324 GYPEP15421 78 aa3.98□□□□□ -1.77
SMG1-211ENST00000565324 TCL1BO95988 128 aa3.98□□□□□ -1.77
SMG1-211ENST00000565324 H7C423 109 aa3.97□□□□□ -1.77
SMG1-211ENST00000565324 IGLC6P0CF74 106 aa3.97□□□□□ -1.77
SMG1-211ENST00000565324 WFDC11Q8NEX6 87 aa3.97□□□□□ -1.77
SMG1-211ENST00000565324 Q8NFD4 153 aa3.97□□□□□ -1.77
SMG1-211ENST00000565324 A0A0U1RQV1 116 aa3.97□□□□□ -1.77
SMG1-211ENST00000565324 COX7BP24311 80 aa3.97□□□□□ -1.77
SMG1-211ENST00000565324 BLCAPP62952 87 aa3.97□□□□□ -1.77
SMG1-211ENST00000565324 CCL24O00175 119 aa3.97□□□□□ -1.77
SMG1-211ENST00000565324 PINLYPA6NC86 204 aa3.97□□□□□ -1.77
SMG1-211ENST00000565324 SPART-AS1P0CW21 52 aa3.97□□□□□ -1.77
SMG1-211ENST00000565324 VPREB3Q9UKI3 123 aa3.97□□□□□ -1.77
SMG1-211ENST00000565324 IGKV1OR2-108A0A075B7D4 117 aa3.97□□□□□ -1.77
SMG1-211ENST00000565324 COL8A2P25067 703 aa3.97□□□□□ -1.77
SMG1-211ENST00000565324 TDRG1Q3Y452 100 aa3.97□□□□□ -1.77
SMG1-211ENST00000565324 COL5A1P20908 1838 aaPredicted RBP3.97□□□□□ -1.77
SMG1-211ENST00000565324 C17orf82Q86X59 251 aaPredicted RBP3.97□□□□□ -1.77
SMG1-211ENST00000565324 A0A0J9YXV3 536 aa3.97□□□□□ -1.77
SMG1-211ENST00000565324 C1orf147Q96MC9 270 aaPredicted RBP3.97□□□□□ -1.77
SMG1-211ENST00000565324 P0DMU3 169 aa3.97□□□□□ -1.77
SMG1-211ENST00000565324 FAM231AP0DMU4 169 aa3.97□□□□□ -1.77
SMG1-211ENST00000565324 FAM231CP0DMU5 169 aa3.97□□□□□ -1.77
SMG1-211ENST00000565324 GP9P14770 177 aa3.97□□□□□ -1.77
SMG1-211ENST00000565324 SLX1AQ9BQ83 275 aa3.97□□□□□ -1.77
SMG1-211ENST00000565324 OTOGLQ3ZCN5 2332 aa3.97□□□□□ -1.77
SMG1-211ENST00000565324 TRBV10-1A0A0K0K1A3 114 aa3.96□□□□□ -1.77
SMG1-211ENST00000565324 HOXB4P17483 251 aaPredicted RBP3.96□□□□□ -1.77
SMG1-211ENST00000565324 C1orf195Q5TG92 126 aa3.96□□□□□ -1.77
SMG1-211ENST00000565324 WDR86Q86TI4 376 aa3.96□□□□□ -1.77
SMG1-211ENST00000565324 LOXP28300 417 aaPredicted RBP3.96□□□□□ -1.78
SMG1-211ENST00000565324 GTSF1Q8WW33 167 aa3.96□□□□□ -1.78
SMG1-211ENST00000565324 SERP1Q9Y6X1 66 aa3.96□□□□□ -1.78
SMG1-211ENST00000565324 PTPRSQ13332 1948 aa3.96□□□□□ -1.78
SMG1-211ENST00000565324 C9orf66Q5T8R8 295 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 2675.3 ms