RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 C9JAW5 83 aa15.49■□□□□ 0.07
MAP1LC3B-206ENST00000564844 RNF223E7ERA6 249 aa15.49■□□□□ 0.07
MAP1LC3B-206ENST00000564844 SAA4P35542 130 aa15.49■□□□□ 0.07
MAP1LC3B-206ENST00000564844 ZFAND2AQ8N6M9 145 aa15.49■□□□□ 0.07
MAP1LC3B-206ENST00000564844 ZANQ9Y493 2812 aa15.49■□□□□ 0.07
MAP1LC3B-206ENST00000564844 TCTEX1D4Q5JR98 221 aa15.48■□□□□ 0.07
MAP1LC3B-206ENST00000564844 COX6B1P14854 86 aa15.48■□□□□ 0.07
MAP1LC3B-206ENST00000564844 TRAV2A0A0B4J234 112 aa15.47■□□□□ 0.07
MAP1LC3B-206ENST00000564844 OR10J6PQ8NGY7 276 aa15.47■□□□□ 0.07
MAP1LC3B-206ENST00000564844 EEF1AKMT3Q96AZ1 226 aa15.47■□□□□ 0.07
MAP1LC3B-206ENST00000564844 A8MWV9 139 aa15.47■□□□□ 0.07
MAP1LC3B-206ENST00000564844 LY6EQ16553 131 aa15.47■□□□□ 0.07
MAP1LC3B-206ENST00000564844 BRD3OSQ6XYD6 125 aa15.47■□□□□ 0.07
MAP1LC3B-206ENST00000564844 MYO18BQ8IUG5 2567 aa15.47■□□□□ 0.07
MAP1LC3B-206ENST00000564844 TEN1Q86WV5 123 aa15.47■□□□□ 0.07
MAP1LC3B-206ENST00000564844 PPDPFLQ8WWR9 84 aa15.47■□□□□ 0.07
MAP1LC3B-206ENST00000564844 ZNF580Q9UK33 172 aa15.47■□□□□ 0.07
MAP1LC3B-206ENST00000564844 WNK1Q9H4A3 2382 aa15.47■□□□□ 0.07
MAP1LC3B-206ENST00000564844 IGLV4-69A0A075B6H9 119 aa15.46■□□□□ 0.07
MAP1LC3B-206ENST00000564844 TRBV20-1A0A075B6N2 111 aa15.46■□□□□ 0.07
MAP1LC3B-206ENST00000564844 IGHV4-39P01824 125 aa15.46■□□□□ 0.07
MAP1LC3B-206ENST00000564844 EDN2P20800 178 aa15.46■□□□□ 0.07
MAP1LC3B-206ENST00000564844 Q1RN00 199 aa15.46■□□□□ 0.07
MAP1LC3B-206ENST00000564844 M0R1W7 72 aa15.46■□□□□ 0.07
MAP1LC3B-206ENST00000564844 ZNRF2Q8NHG8 242 aa15.46■□□□□ 0.07
MAP1LC3B-206ENST00000564844 ANAPC13Q9BS18 74 aa15.46■□□□□ 0.07
MAP1LC3B-206ENST00000564844 ACACBO00763 2458 aa15.45■□□□□ 0.06
MAP1LC3B-206ENST00000564844 TRAV21A0A0B4J279 112 aa15.45■□□□□ 0.06
MAP1LC3B-206ENST00000564844 GPHB5Q86YW7 130 aa15.45■□□□□ 0.06
MAP1LC3B-206ENST00000564844 UBE2D3P61077 147 aa15.45■□□□□ 0.06
MAP1LC3B-206ENST00000564844 NPC2P61916 151 aa15.45■□□□□ 0.06
MAP1LC3B-206ENST00000564844 UBE2D2P62837 147 aa15.45■□□□□ 0.06
MAP1LC3B-206ENST00000564844 ZFYVE26Q68DK2 2539 aa15.44■□□□□ 0.06
MAP1LC3B-206ENST00000564844 RNASE3P12724 160 aaKnown RBP15.44■□□□□ 0.06
MAP1LC3B-206ENST00000564844 A4D1N5 150 aa15.44■□□□□ 0.06
MAP1LC3B-206ENST00000564844 CITED1Q99966 193 aa15.44■□□□□ 0.06
MAP1LC3B-206ENST00000564844 IGHV4-4A0A075B6R2 117 aa15.43■□□□□ 0.06
MAP1LC3B-206ENST00000564844 BRI3O95415 125 aa15.43■□□□□ 0.06
MAP1LC3B-206ENST00000564844 PF4V1P10720 104 aa15.43■□□□□ 0.06
MAP1LC3B-206ENST00000564844 LINC00477Q96M19 166 aa15.43■□□□□ 0.06
MAP1LC3B-206ENST00000564844 ELANEP08246 267 aa15.43■□□□□ 0.06
MAP1LC3B-206ENST00000564844 FLNCQ14315 2725 aa15.43■□□□□ 0.06
MAP1LC3B-206ENST00000564844 B5MCH6 92 aa15.42■□□□□ 0.06
MAP1LC3B-206ENST00000564844 IGHV3-30P01768 117 aa15.42■□□□□ 0.06
MAP1LC3B-206ENST00000564844 IGHV3-30-5P0DP03 117 aa15.42■□□□□ 0.06
MAP1LC3B-206ENST00000564844 HERVK_113P61574 105 aa15.42■□□□□ 0.06
MAP1LC3B-206ENST00000564844 TRAV12-3A0A0B4J271 114 aa15.42■□□□□ 0.06
MAP1LC3B-206ENST00000564844 ZNF688P0C7X2 276 aa15.41■□□□□ 0.06
MAP1LC3B-206ENST00000564844 C10orf126Q8N4M7 172 aa15.41■□□□□ 0.06
MAP1LC3B-206ENST00000564844 PRO1854Q9UHT4 67 aa15.41■□□□□ 0.06
MAP1LC3B-206ENST00000564844 SDHAF1A6NFY7 115 aa15.41■□□□□ 0.06
MAP1LC3B-206ENST00000564844 LGALS3P17931 250 aaKnown RBP15.41■□□□□ 0.06
MAP1LC3B-206ENST00000564844 SLC25A20O43772 301 aa15.4■□□□□ 0.06
MAP1LC3B-206ENST00000564844 PMVKQ15126 192 aa15.4■□□□□ 0.06
MAP1LC3B-206ENST00000564844 SUMO4Q6EEV6 95 aa15.4■□□□□ 0.06
MAP1LC3B-206ENST00000564844 SONP18583 2426 aaKnown RBP15.4■□□□□ 0.06
MAP1LC3B-206ENST00000564844 A0A1W2PPR1 153 aa15.4■□□□□ 0.06
MAP1LC3B-206ENST00000564844 TRAV12-2A0A075B6T6 113 aa15.4■□□□□ 0.06
MAP1LC3B-206ENST00000564844 J3QQQ9 107 aa15.4■□□□□ 0.06
MAP1LC3B-206ENST00000564844 PRSS2P07478 247 aa15.4■□□□□ 0.06
MAP1LC3B-206ENST00000564844 RNASE13Q5GAN3 156 aaKnown RBP15.4■□□□□ 0.06
MAP1LC3B-206ENST00000564844 HTN1P15515 57 aa15.39■□□□□ 0.05
MAP1LC3B-206ENST00000564844 NTN5Q8WTR8 489 aaPredicted RBP15.39■□□□□ 0.05
MAP1LC3B-206ENST00000564844 ITPR1Q14643 2758 aa15.39■□□□□ 0.05
MAP1LC3B-206ENST00000564844 CRLF1O75462 422 aa15.39■□□□□ 0.05
MAP1LC3B-206ENST00000564844 EBI3Q14213 229 aa15.39■□□□□ 0.05
MAP1LC3B-206ENST00000564844 AJUBAQ96IF1 538 aa15.39■□□□□ 0.05
MAP1LC3B-206ENST00000564844 EIF4EBP3O60516 100 aaPredicted RBP15.38■□□□□ 0.05
MAP1LC3B-206ENST00000564844 TEX29Q8N6K0 151 aa15.38■□□□□ 0.05
MAP1LC3B-206ENST00000564844 IGIPA6NJ69 53 aa15.37■□□□□ 0.05
MAP1LC3B-206ENST00000564844 C9orf139Q6ZV77 190 aa15.37■□□□□ 0.05
MAP1LC3B-206ENST00000564844 ATP6V0E2Q8NHE4 81 aa15.37■□□□□ 0.05
MAP1LC3B-206ENST00000564844 ZFAND6Q6FIF0 208 aa15.37■□□□□ 0.05
MAP1LC3B-206ENST00000564844 IGF2-ASQ6U949 168 aa15.37■□□□□ 0.05
MAP1LC3B-206ENST00000564844 MUSTN1Q8IVN3 82 aa15.37■□□□□ 0.05
MAP1LC3B-206ENST00000564844 PRRC2AP48634 2157 aaKnown RBP15.37■□□□□ 0.05
MAP1LC3B-206ENST00000564844 LINC01619G3V211 115 aa15.37■□□□□ 0.05
MAP1LC3B-206ENST00000564844 ZNF56Q15929 161 aa15.37■□□□□ 0.05
MAP1LC3B-206ENST00000564844 Q6ZSV7 163 aa15.37■□□□□ 0.05
MAP1LC3B-206ENST00000564844 ITLN2Q8WWU7 325 aaPredicted RBP15.37■□□□□ 0.05
MAP1LC3B-206ENST00000564844 BPESC1Q9GZL8 116 aa15.37■□□□□ 0.05
MAP1LC3B-206ENST00000564844 TRBV7-1A0A0A6YYK4 115 aa15.36■□□□□ 0.05
MAP1LC3B-206ENST00000564844 TRAV41A0A0B4J266 112 aa15.36■□□□□ 0.05
MAP1LC3B-206ENST00000564844 TRAV4A0A0B4J268 109 aa15.36■□□□□ 0.05
MAP1LC3B-206ENST00000564844 TRBV7-9A0A0J9YWB2 115 aa15.36■□□□□ 0.05
MAP1LC3B-206ENST00000564844 MINOS1Q5TGZ0 78 aa15.36■□□□□ 0.05
MAP1LC3B-206ENST00000564844 FAM159AQ6UWV7 190 aa15.36■□□□□ 0.05
MAP1LC3B-206ENST00000564844 SLC25A29Q8N8R3 303 aa15.36■□□□□ 0.05
MAP1LC3B-206ENST00000564844 MINOS1-NBL1R4GNA1 71 aa15.36■□□□□ 0.05
MAP1LC3B-206ENST00000564844 IGHV3-73A0A0B4J1V6 119 aa15.36■□□□□ 0.05
MAP1LC3B-206ENST00000564844 CENPVL3A0A0U1RRI6 287 aa15.36■□□□□ 0.05
MAP1LC3B-206ENST00000564844 TEX49A0A1B0GTD5 131 aa15.36■□□□□ 0.05
MAP1LC3B-206ENST00000564844 SIRPDQ9H106 197 aa15.35■□□□□ 0.05
MAP1LC3B-206ENST00000564844 ERG28Q9UKR5 140 aa15.35■□□□□ 0.05
MAP1LC3B-206ENST00000564844 ID1P41134 155 aa15.35■□□□□ 0.05
MAP1LC3B-206ENST00000564844 SPXQ9BT56 116 aa15.35■□□□□ 0.05
MAP1LC3B-206ENST00000564844 A0A0J9YXV3 536 aa15.34■□□□□ 0.05
MAP1LC3B-206ENST00000564844 LINC00315P59091 139 aa15.34■□□□□ 0.05
MAP1LC3B-206ENST00000564844 LYRM7Q5U5X0 104 aa15.34■□□□□ 0.05
MAP1LC3B-206ENST00000564844 MDFICQ9P1T7 246 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms