RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 GPN1Q9HCN4 374 aaPredicted RBP6.18□□□□□ -1.42
HDGFL3-204ENST00000563790 H0Y9J4 135 aa6.17□□□□□ -1.42
HDGFL3-204ENST00000563790 L7N2F9 121 aa6.17□□□□□ -1.42
HDGFL3-204ENST00000563790 PLA2G10O15496 165 aa6.17□□□□□ -1.42
HDGFL3-204ENST00000563790 BCAP31P51572 246 aa6.17□□□□□ -1.42
HDGFL3-204ENST00000563790 RANP62826 216 aaKnown RBP6.17□□□□□ -1.42
HDGFL3-204ENST00000563790 VAMP2P63027 116 aa6.17□□□□□ -1.42
HDGFL3-204ENST00000563790 RAB32Q13637 225 aa6.17□□□□□ -1.42
HDGFL3-204ENST00000563790 UFSP1Q6NVU6 142 aa6.17□□□□□ -1.42
HDGFL3-204ENST00000563790 NIT1Q86X76 327 aa6.17□□□□□ -1.42
HDGFL3-204ENST00000563790 THAP6Q8TBB0 222 aa6.17□□□□□ -1.42
HDGFL3-204ENST00000563790 IGHV3-73A0A0B4J1V6 119 aa6.16□□□□□ -1.42
HDGFL3-204ENST00000563790 PGPEP1LA6NFU8 196 aa6.16□□□□□ -1.42
HDGFL3-204ENST00000563790 F6UZH7 168 aa6.16□□□□□ -1.42
HDGFL3-204ENST00000563790 IFNA7P01567 189 aa6.16□□□□□ -1.42
HDGFL3-204ENST00000563790 HLA-DQA1P01909 254 aa6.16□□□□□ -1.42
HDGFL3-204ENST00000563790 RNASE3P12724 160 aaKnown RBP6.16□□□□□ -1.42
HDGFL3-204ENST00000563790 ZNF80P51504 273 aaPredicted RBP6.16□□□□□ -1.42
HDGFL3-204ENST00000563790 NHLH2Q02577 135 aa6.16□□□□□ -1.42
HDGFL3-204ENST00000563790 Q0VG73 95 aa6.16□□□□□ -1.42
HDGFL3-204ENST00000563790 ATP6V1FQ16864 119 aa6.16□□□□□ -1.42
HDGFL3-204ENST00000563790 ZNF876PQ49A33 203 aa6.16□□□□□ -1.42
HDGFL3-204ENST00000563790 ZNF506Q5JVG8 444 aa6.16□□□□□ -1.42
HDGFL3-204ENST00000563790 CLRN3Q8NCR9 226 aa6.16□□□□□ -1.42
HDGFL3-204ENST00000563790 OR10G9Q8NGN4 311 aa6.16□□□□□ -1.42
HDGFL3-204ENST00000563790 PTH2Q96A98 100 aa6.16□□□□□ -1.42
HDGFL3-204ENST00000563790 SEC22CQ9BRL7 303 aa6.16□□□□□ -1.42
HDGFL3-204ENST00000563790 PRADC1Q9BSG0 188 aa6.16□□□□□ -1.42
HDGFL3-204ENST00000563790 RBM38Q9H0Z9 239 aaKnown RBP6.16□□□□□ -1.42
HDGFL3-204ENST00000563790 NAGKQ9UJ70 344 aa6.16□□□□□ -1.42
HDGFL3-204ENST00000563790 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.15□□□□□ -1.42
HDGFL3-204ENST00000563790 TRAV21A0A0B4J279 112 aa6.15□□□□□ -1.42
HDGFL3-204ENST00000563790 CIDEAO60543 219 aa6.15□□□□□ -1.42
HDGFL3-204ENST00000563790 HBG1P69891 147 aa6.15□□□□□ -1.42
HDGFL3-204ENST00000563790 HBG2P69892 147 aa6.15□□□□□ -1.42
HDGFL3-204ENST00000563790 IGKV2-24A0A0C4DH68 120 aa6.14□□□□□ -1.43
HDGFL3-204ENST00000563790 FAM25EA8MYX2 175 aa6.14□□□□□ -1.43
HDGFL3-204ENST00000563790 H0YIZ8 118 aa6.14□□□□□ -1.43
HDGFL3-204ENST00000563790 EIF3GO75821 320 aaKnown RBP eCLIP6.14□□□□□ -1.43
HDGFL3-204ENST00000563790 MGST1P10620 155 aaKnown RBP6.14□□□□□ -1.43
HDGFL3-204ENST00000563790 IL7P13232 177 aa6.14□□□□□ -1.43
HDGFL3-204ENST00000563790 CSN1S1P47710 185 aa6.14□□□□□ -1.43
HDGFL3-204ENST00000563790 INPP1P49441 399 aa6.14□□□□□ -1.43
HDGFL3-204ENST00000563790 COX6A2Q02221 97 aa6.14□□□□□ -1.43
HDGFL3-204ENST00000563790 SPANXN2Q5MJ10 180 aa6.14□□□□□ -1.43
HDGFL3-204ENST00000563790 STX12Q86Y82 276 aa6.14□□□□□ -1.43
HDGFL3-204ENST00000563790 OR5C1Q8NGR4 320 aa6.14□□□□□ -1.43
HDGFL3-204ENST00000563790 WDR61Q9GZS3 305 aaKnown RBP6.14□□□□□ -1.43
HDGFL3-204ENST00000563790 PPDPFQ9H3Y8 114 aa6.14□□□□□ -1.43
HDGFL3-204ENST00000563790 C5orf51A6NDU8 294 aa6.13□□□□□ -1.43
HDGFL3-204ENST00000563790 OR7C2O60412 319 aa6.13□□□□□ -1.43
HDGFL3-204ENST00000563790 SLPIP03973 132 aa6.13□□□□□ -1.43
HDGFL3-204ENST00000563790 S100A10P60903 97 aa6.13□□□□□ -1.43
HDGFL3-204ENST00000563790 UBE2L3P68036 154 aaKnown RBP6.13□□□□□ -1.43
HDGFL3-204ENST00000563790 GOLT1AQ6ZVE7 132 aa6.13□□□□□ -1.43
HDGFL3-204ENST00000563790 CYB561D1Q8N8Q1 229 aa6.13□□□□□ -1.43
HDGFL3-204ENST00000563790 ASB13Q8WXK3 278 aa6.13□□□□□ -1.43
HDGFL3-204ENST00000563790 SAMD10Q9BYL1 202 aa6.13□□□□□ -1.43
HDGFL3-204ENST00000563790 SH3BGRL3Q9H299 93 aa6.13□□□□□ -1.43
HDGFL3-204ENST00000563790 PARLQ9H300 379 aa6.13□□□□□ -1.43
HDGFL3-204ENST00000563790 OTORQ9NRC9 128 aa6.13□□□□□ -1.43
HDGFL3-204ENST00000563790 GAGE12JA6NER3 117 aa6.12□□□□□ -1.43
HDGFL3-204ENST00000563790 PVALBP20472 110 aaPredicted RBP6.12□□□□□ -1.43
HDGFL3-204ENST00000563790 S100A5P33763 92 aa6.12□□□□□ -1.43
HDGFL3-204ENST00000563790 GNG5P63218 68 aa6.12□□□□□ -1.43
HDGFL3-204ENST00000563790 GAGE1Q13065 139 aa6.12□□□□□ -1.43
HDGFL3-204ENST00000563790 GAGE4Q13068 117 aa6.12□□□□□ -1.43
HDGFL3-204ENST00000563790 GAGE5Q13069 117 aa6.12□□□□□ -1.43
HDGFL3-204ENST00000563790 CNPY1Q3B7I2 92 aa6.12□□□□□ -1.43
HDGFL3-204ENST00000563790 GAGE13Q4V321 117 aa6.12□□□□□ -1.43
HDGFL3-204ENST00000563790 TRIQKQ629K1 86 aa6.12□□□□□ -1.43
HDGFL3-204ENST00000563790 ZFP2Q6ZN57 461 aa6.12□□□□□ -1.43
HDGFL3-204ENST00000563790 C14orf178Q8N769 122 aaPredicted RBP6.12□□□□□ -1.43
HDGFL3-204ENST00000563790 KCNS1Q96KK3 526 aa6.12□□□□□ -1.43
HDGFL3-204ENST00000563790 JPT2Q9H910 190 aa6.12□□□□□ -1.43
HDGFL3-204ENST00000563790 TREM1Q9NP99 234 aa6.12□□□□□ -1.43
HDGFL3-204ENST00000563790 OR5AC2Q9NZP5 309 aa6.12□□□□□ -1.43
HDGFL3-204ENST00000563790 PGPA6NDG6 321 aa6.11□□□□□ -1.43
HDGFL3-204ENST00000563790 KRTAP26-1Q6PEX3 210 aa6.11□□□□□ -1.43
HDGFL3-204ENST00000563790 ENHOQ6UWT2 76 aa6.11□□□□□ -1.43
HDGFL3-204ENST00000563790 SGK494Q96LW2 274 aa6.11□□□□□ -1.43
HDGFL3-204ENST00000563790 HYLS1Q96M11 299 aa6.11□□□□□ -1.43
HDGFL3-204ENST00000563790 NUDT15Q9NV35 164 aa6.11□□□□□ -1.43
HDGFL3-204ENST00000563790 CARHSP1Q9Y2V2 147 aaKnown RBP6.11□□□□□ -1.43
HDGFL3-204ENST00000563790 TRAV6A0A075B6T7 132 aa6.1□□□□□ -1.43
HDGFL3-204ENST00000563790 A0A087WWC5 75 aa6.1□□□□□ -1.43
HDGFL3-204ENST00000563790 LYRM1O43325 122 aa6.1□□□□□ -1.43
HDGFL3-204ENST00000563790 NDUFS6O75380 124 aaKnown RBP6.1□□□□□ -1.43
HDGFL3-204ENST00000563790 ELOBQ15370 118 aa6.1□□□□□ -1.43
HDGFL3-204ENST00000563790 SS18Q15532 418 aa6.1□□□□□ -1.43
HDGFL3-204ENST00000563790 PIK3CD-AS1Q5SR53 167 aa6.1□□□□□ -1.43
HDGFL3-204ENST00000563790 LINC00337Q8N6G1 96 aa6.1□□□□□ -1.43
HDGFL3-204ENST00000563790 IGKV3D-20A0A0C4DH25 116 aa6.09□□□□□ -1.43
HDGFL3-204ENST00000563790 hDV102S1A0JD36 115 aa6.09□□□□□ -1.43
HDGFL3-204ENST00000563790 NOL3O60936 208 aaKnown RBP6.09□□□□□ -1.43
HDGFL3-204ENST00000563790 KHDC3LQ587J8 217 aa6.09□□□□□ -1.43
HDGFL3-204ENST00000563790 OR2T35Q8NGX2 323 aa6.09□□□□□ -1.43
HDGFL3-204ENST00000563790 PRSS3P2Q8NHM4 247 aa6.09□□□□□ -1.43
HDGFL3-204ENST00000563790 ATP5SQ99766 215 aa6.09□□□□□ -1.43
HDGFL3-204ENST00000563790 CHCHD7Q9BUK0 85 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms