RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 C2orf91Q6ZV80 131 aa3.37□□□□□ -1.87
SMG1-207ENST00000563235 TIMM9Q9Y5J7 89 aa3.37□□□□□ -1.87
SMG1-207ENST00000563235 DMXL1Q9Y485 3027 aa3.36□□□□□ -1.87
SMG1-207ENST00000563235 ARHGAP21Q5T5U3 1957 aa3.36□□□□□ -1.87
SMG1-207ENST00000563235 NACAE9PAV3 2078 aa3.36□□□□□ -1.87
SMG1-207ENST00000563235 LINC01548A6NM66 108 aa3.36□□□□□ -1.87
SMG1-207ENST00000563235 IFI6P09912 130 aa3.36□□□□□ -1.87
SMG1-207ENST00000563235 ZFP2Q6ZN57 461 aa3.36□□□□□ -1.87
SMG1-207ENST00000563235 GTSF1Q8WW33 167 aa3.36□□□□□ -1.87
SMG1-207ENST00000563235 ZNF414Q96IQ9 312 aa3.36□□□□□ -1.87
SMG1-207ENST00000563235 ODF3Q96PU9 254 aa3.36□□□□□ -1.87
SMG1-207ENST00000563235 TMEM14AQ9Y6G1 99 aa3.36□□□□□ -1.87
SMG1-207ENST00000563235 F2Z2F3 143 aa3.36□□□□□ -1.87
SMG1-207ENST00000563235 ATOX1O00244 68 aa3.36□□□□□ -1.87
SMG1-207ENST00000563235 ASAH2BP0C7U1 165 aa3.36□□□□□ -1.87
SMG1-207ENST00000563235 FAM53AQ6NSI3 398 aaPredicted RBP3.36□□□□□ -1.87
SMG1-207ENST00000563235 LYPD2Q6UXB3 125 aa3.36□□□□□ -1.87
SMG1-207ENST00000563235 C16orf47Q6ZP98 133 aaPredicted RBP3.36□□□□□ -1.87
SMG1-207ENST00000563235 MIR17HGQ75NE6 70 aa3.36□□□□□ -1.87
SMG1-207ENST00000563235 C5orf38Q86SI9 138 aa3.36□□□□□ -1.87
SMG1-207ENST00000563235 MYOZ3Q8TDC0 251 aa3.36□□□□□ -1.87
SMG1-207ENST00000563235 C1orf147Q96MC9 270 aaPredicted RBP3.36□□□□□ -1.87
SMG1-207ENST00000563235 IGLV3-12A0A075B6K2 115 aa3.35□□□□□ -1.87
SMG1-207ENST00000563235 IGHV3OR16-10A0A075B7F0 116 aa3.35□□□□□ -1.87
SMG1-207ENST00000563235 TRAV17A0A0B4J275 112 aa3.35□□□□□ -1.87
SMG1-207ENST00000563235 B4DSR2 109 aa3.35□□□□□ -1.87
SMG1-207ENST00000563235 C3orf84H3BNL1 204 aa3.35□□□□□ -1.87
SMG1-207ENST00000563235 IGHV3-7P01780 117 aa3.35□□□□□ -1.87
SMG1-207ENST00000563235 SLC25A16P16260 332 aa3.35□□□□□ -1.87
SMG1-207ENST00000563235 MRPL51Q4U2R6 128 aaKnown RBP3.35□□□□□ -1.87
SMG1-207ENST00000563235 BAGE3Q86Y29 109 aa3.35□□□□□ -1.87
SMG1-207ENST00000563235 BAGE2Q86Y30 109 aa3.35□□□□□ -1.87
SMG1-207ENST00000563235 TXNDC17Q9BRA2 123 aa3.35□□□□□ -1.87
SMG1-207ENST00000563235 SLC50A1Q9BRV3 221 aa3.35□□□□□ -1.87
SMG1-207ENST00000563235 TTTY10Q9BZA0 68 aa3.35□□□□□ -1.87
SMG1-207ENST00000563235 XIRP2A4UGR9 3374 aa3.35□□□□□ -1.87
SMG1-207ENST00000563235 ZFYVE26Q68DK2 2539 aa3.35□□□□□ -1.87
SMG1-207ENST00000563235 CEBPZOSA8MTT3 80 aa3.35□□□□□ -1.87
SMG1-207ENST00000563235 CFC1BP0CG36 223 aa3.35□□□□□ -1.87
SMG1-207ENST00000563235 CCL3P10147 92 aa3.35□□□□□ -1.87
SMG1-207ENST00000563235 UBE2G1P62253 170 aa3.35□□□□□ -1.87
SMG1-207ENST00000563235 LUZP6Q538Z0 58 aa3.35□□□□□ -1.87
SMG1-207ENST00000563235 LY6G5CQ5SRR4 150 aa3.35□□□□□ -1.87
SMG1-207ENST00000563235 SPTSSAQ969W0 71 aa3.35□□□□□ -1.87
SMG1-207ENST00000563235 SMIM14Q96QK8 99 aa3.35□□□□□ -1.87
SMG1-207ENST00000563235 NXT2Q9NPJ8 142 aaKnown RBP3.35□□□□□ -1.87
SMG1-207ENST00000563235 TAS2R4Q9NYW5 299 aa3.35□□□□□ -1.87
SMG1-207ENST00000563235 DPM3Q9P2X0 92 aa3.35□□□□□ -1.87
SMG1-207ENST00000563235 TRAV2A0A0B4J234 112 aa3.34□□□□□ -1.87
SMG1-207ENST00000563235 HMGN2P05204 90 aaKnown RBP3.34□□□□□ -1.87
SMG1-207ENST00000563235 PRB4P10163 310 aaPredicted RBP3.34□□□□□ -1.87
SMG1-207ENST00000563235 COX8AP10176 69 aa3.34□□□□□ -1.87
SMG1-207ENST00000563235 CCL8P80075 99 aa3.34□□□□□ -1.87
SMG1-207ENST00000563235 CASC10Q5T4H9 136 aa3.34□□□□□ -1.87
SMG1-207ENST00000563235 CFAP126Q5VTH2 177 aa3.34□□□□□ -1.87
SMG1-207ENST00000563235 ATP11AUNQ6ZP68 121 aa3.34□□□□□ -1.87
SMG1-207ENST00000563235 FAM216BQ8N7L0 139 aa3.34□□□□□ -1.87
SMG1-207ENST00000563235 C8orf49Q96NF6 230 aa3.34□□□□□ -1.87
SMG1-207ENST00000563235 KIAA1549LQ6ZVL6 1849 aa3.34□□□□□ -1.87
SMG1-207ENST00000563235 CABIN1Q9Y6J0 2220 aa3.34□□□□□ -1.87
SMG1-207ENST00000563235 IGHV3OR15-7A0A075B7D8 119 aa3.34□□□□□ -1.87
SMG1-207ENST00000563235 RNASE2P10153 161 aaKnown RBP3.34□□□□□ -1.87
SMG1-207ENST00000563235 NPPCP23582 126 aa3.34□□□□□ -1.87
SMG1-207ENST00000563235 CKS2P33552 79 aa3.34□□□□□ -1.87
SMG1-207ENST00000563235 DPTQ07507 201 aa3.34□□□□□ -1.87
SMG1-207ENST00000563235 TMEM136Q6ZRR5 245 aa3.34□□□□□ -1.87
SMG1-207ENST00000563235 ORMDL3Q8N138 153 aa3.34□□□□□ -1.87
SMG1-207ENST00000563235 ZFAND2AQ8N6M9 145 aa3.34□□□□□ -1.87
SMG1-207ENST00000563235 FBN3Q75N90 2809 aa3.34□□□□□ -1.87
SMG1-207ENST00000563235 MYO18BQ8IUG5 2567 aa3.34□□□□□ -1.88
SMG1-207ENST00000563235 IGKV1D-17A0A075B6S4 117 aa3.33□□□□□ -1.88
SMG1-207ENST00000563235 CXorf51AA0A1B0GTR3 108 aa3.33□□□□□ -1.88
SMG1-207ENST00000563235 CCL16O15467 120 aa3.33□□□□□ -1.88
SMG1-207ENST00000563235 LINC01547P58512 204 aaPredicted RBP3.33□□□□□ -1.88
SMG1-207ENST00000563235 HIST1H4AP62805 103 aaKnown RBP3.33□□□□□ -1.88
SMG1-207ENST00000563235 C7orf33Q8WU49 177 aa3.33□□□□□ -1.88
SMG1-207ENST00000563235 CHCHD1Q96BP2 118 aaKnown RBP3.33□□□□□ -1.88
SMG1-207ENST00000563235 DNAH14Q0VDD8 3507 aa3.33□□□□□ -1.88
SMG1-207ENST00000563235 MED13Q9UHV7 2174 aa3.33□□□□□ -1.88
SMG1-207ENST00000563235 CTXND1A0A1B0GTU2 59 aa3.33□□□□□ -1.88
SMG1-207ENST00000563235 C17orf51A8MQB3 221 aa3.33□□□□□ -1.88
SMG1-207ENST00000563235 E7EQL1 145 aa3.33□□□□□ -1.88
SMG1-207ENST00000563235 IGHV3-13P01766 116 aa3.33□□□□□ -1.88
SMG1-207ENST00000563235 EFNA4P52798 201 aa3.33□□□□□ -1.88
SMG1-207ENST00000563235 SERP2Q8N6R1 65 aa3.33□□□□□ -1.88
SMG1-207ENST00000563235 NPBQ8NG41 125 aa3.33□□□□□ -1.88
SMG1-207ENST00000563235 MPLKIPQ8TAP9 179 aa3.33□□□□□ -1.88
SMG1-207ENST00000563235 LRP4O75096 1905 aa3.33□□□□□ -1.88
SMG1-207ENST00000563235 IGLV8-61A0A075B6I0 122 aa3.33□□□□□ -1.88
SMG1-207ENST00000563235 LOC107984156A0A0G2JMH3 177 aa3.33□□□□□ -1.88
SMG1-207ENST00000563235 IGHV3-11P01762 117 aa3.33□□□□□ -1.88
SMG1-207ENST00000563235 LYZL2Q7Z4W2 148 aa3.33□□□□□ -1.88
SMG1-207ENST00000563235 ARL17AQ8IVW1 177 aa3.33□□□□□ -1.88
SMG1-207ENST00000563235 ZNF525Q8N782 197 aa3.33□□□□□ -1.88
SMG1-207ENST00000563235 CCL4L1Q8NHW4 92 aa3.33□□□□□ -1.88
SMG1-207ENST00000563235 ZNF524Q96C55 264 aa3.33□□□□□ -1.88
SMG1-207ENST00000563235 RMI2Q96E14 147 aa3.33□□□□□ -1.88
SMG1-207ENST00000563235 KRTAP4-9Q9BYQ8 210 aa3.33□□□□□ -1.88
SMG1-207ENST00000563235 KIAA1549Q9HCM3 1950 aa3.32□□□□□ -1.88
SMG1-207ENST00000563235 TEP1Q99973 2627 aaKnown RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms