RNA–Protein interactions for RNA: ENST00000562576.5

CNEP1R1-204, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 5 BASIC

Gene CNEP1R1, Length 656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-204ENST00000562576 FAM74A4Q5TZK3 123 aa4.02□□□□□ -1.77
CNEP1R1-204ENST00000562576 PTH2Q96A98 100 aa4.02□□□□□ -1.77
CNEP1R1-204ENST00000562576 DIRAS2Q96HU8 199 aa4.02□□□□□ -1.77
CNEP1R1-204ENST00000562576 PRRT1Q99946 306 aa4.02□□□□□ -1.77
CNEP1R1-204ENST00000562576 SH3BGRL3Q9H299 93 aa4.02□□□□□ -1.77
CNEP1R1-204ENST00000562576 TREM1Q9NP99 234 aa4.02□□□□□ -1.77
CNEP1R1-204ENST00000562576 MCUBQ9NWR8 336 aa4.02□□□□□ -1.77
CNEP1R1-204ENST00000562576 WDR83OSQ9Y284 106 aa4.02□□□□□ -1.77
CNEP1R1-204ENST00000562576 IGLV4-60A0A075B6I1 120 aa4.01□□□□□ -1.77
CNEP1R1-204ENST00000562576 IGKV3D-20A0A0C4DH25 116 aa4.01□□□□□ -1.77
CNEP1R1-204ENST00000562576 ANKRD20A5PA0PJZ0 165 aa4.01□□□□□ -1.77
CNEP1R1-204ENST00000562576 C7orf66A4D0T2 115 aa4.01□□□□□ -1.77
CNEP1R1-204ENST00000562576 CTDSP2O14595 271 aa4.01□□□□□ -1.77
CNEP1R1-204ENST00000562576 TSC22D2O75157 780 aa4.01□□□□□ -1.77
CNEP1R1-204ENST00000562576 RPL29P47914 159 aaKnown RBP4.01□□□□□ -1.77
CNEP1R1-204ENST00000562576 REG3AQ06141 175 aa4.01□□□□□ -1.77
CNEP1R1-204ENST00000562576 PRR27Q6MZM9 219 aa4.01□□□□□ -1.77
CNEP1R1-204ENST00000562576 GOLT1AQ6ZVE7 132 aa4.01□□□□□ -1.77
CNEP1R1-204ENST00000562576 PHF5AQ7RTV0 110 aaKnown RBP4.01□□□□□ -1.77
CNEP1R1-204ENST00000562576 C12orf45Q8N5I9 185 aaPredicted RBP4.01□□□□□ -1.77
CNEP1R1-204ENST00000562576 C20orf203Q8NBC4 194 aa4.01□□□□□ -1.77
CNEP1R1-204ENST00000562576 ATP5SQ99766 215 aa4.01□□□□□ -1.77
CNEP1R1-204ENST00000562576 UBE2L5PA0A1B0GUS4 154 aa4□□□□□ -1.77
CNEP1R1-204ENST00000562576 A8MWV9 139 aa4□□□□□ -1.77
CNEP1R1-204ENST00000562576 H0Y9J4 135 aa4□□□□□ -1.77
CNEP1R1-204ENST00000562576 MT-ND6P03923 174 aa4□□□□□ -1.77
CNEP1R1-204ENST00000562576 SMIM18P0DKX4 95 aa4□□□□□ -1.77
CNEP1R1-204ENST00000562576 CSN1S1P47710 185 aa4□□□□□ -1.77
CNEP1R1-204ENST00000562576 CYCSP99999 105 aaKnown RBP4□□□□□ -1.77
CNEP1R1-204ENST00000562576 SMIM4Q8WVI0 70 aa4□□□□□ -1.77
CNEP1R1-204ENST00000562576 PFDN5Q99471 154 aa4□□□□□ -1.77
CNEP1R1-204ENST00000562576 NAA50Q9GZZ1 169 aaKnown RBP4□□□□□ -1.77
CNEP1R1-204ENST00000562576 LENEPQ9Y5L5 61 aa4□□□□□ -1.77
CNEP1R1-204ENST00000562576 IGLV1-50A0A075B6I6 118 aa3.99□□□□□ -1.77
CNEP1R1-204ENST00000562576 TRBV7-3A0A075B6L6 115 aa3.99□□□□□ -1.77
CNEP1R1-204ENST00000562576 GCGP01275 180 aa3.99□□□□□ -1.77
CNEP1R1-204ENST00000562576 IGLV7-43P04211 117 aa3.99□□□□□ -1.77
CNEP1R1-204ENST00000562576 MT1HP80294 61 aa3.99□□□□□ -1.77
CNEP1R1-204ENST00000562576 BAXQ07812 192 aa3.99□□□□□ -1.77
CNEP1R1-204ENST00000562576 KRTAP19-2Q3LHN2 52 aa3.99□□□□□ -1.77
CNEP1R1-204ENST00000562576 TMEM128Q5BJH2 165 aa3.99□□□□□ -1.77
CNEP1R1-204ENST00000562576 ARL6IP6Q8N6S5 226 aa3.99□□□□□ -1.77
CNEP1R1-204ENST00000562576 NEXN-AS1Q8NBZ9 246 aa3.99□□□□□ -1.77
CNEP1R1-204ENST00000562576 GGACTQ9BVM4 153 aa3.99□□□□□ -1.77
CNEP1R1-204ENST00000562576 NMES1Q9C002 83 aa3.99□□□□□ -1.77
CNEP1R1-204ENST00000562576 GSKIPQ9P0R6 139 aa3.99□□□□□ -1.77
CNEP1R1-204ENST00000562576 SCP2D1Q9UJQ7 156 aa3.99□□□□□ -1.77
CNEP1R1-204ENST00000562576 GRIFINA4D1Z8 144 aa3.98□□□□□ -1.77
CNEP1R1-204ENST00000562576 H3BVH4 76 aa3.98□□□□□ -1.77
CNEP1R1-204ENST00000562576 FGF7P21781 194 aa3.98□□□□□ -1.77
CNEP1R1-204ENST00000562576 CTF1Q16619 201 aa3.98□□□□□ -1.77
CNEP1R1-204ENST00000562576 FER1L6-AS1Q8NA97 138 aa3.98□□□□□ -1.77
CNEP1R1-204ENST00000562576 DIRC1Q969H9 104 aa3.98□□□□□ -1.77
CNEP1R1-204ENST00000562576 SLIRPQ9GZT3 109 aaKnown RBP3.98□□□□□ -1.77
CNEP1R1-204ENST00000562576 C11orf1Q9H5F2 150 aa3.98□□□□□ -1.77
CNEP1R1-204ENST00000562576 UQCC1Q9NVA1 299 aa3.98□□□□□ -1.77
CNEP1R1-204ENST00000562576 IGSF23A1L1A6 192 aa3.97□□□□□ -1.77
CNEP1R1-204ENST00000562576 AMTP48728 403 aa3.97□□□□□ -1.77
CNEP1R1-204ENST00000562576 KRTAP10-6P60371 365 aaPredicted RBP3.97□□□□□ -1.77
CNEP1R1-204ENST00000562576 RPL36AP83881 106 aaKnown RBP3.97□□□□□ -1.77
CNEP1R1-204ENST00000562576 SSBP1Q04837 148 aaKnown RBP3.97□□□□□ -1.77
CNEP1R1-204ENST00000562576 GAGE2BQ13066 116 aa3.97□□□□□ -1.77
CNEP1R1-204ENST00000562576 IAH1Q2TAA2 248 aaPredicted RBP3.97□□□□□ -1.77
CNEP1R1-204ENST00000562576 MZT2AQ6P582 158 aa3.97□□□□□ -1.77
CNEP1R1-204ENST00000562576 THAP6Q8TBB0 222 aa3.97□□□□□ -1.77
CNEP1R1-204ENST00000562576 TMED6Q8WW62 240 aa3.97□□□□□ -1.77
CNEP1R1-204ENST00000562576 RPL36ALQ969Q0 106 aaKnown RBP3.97□□□□□ -1.77
CNEP1R1-204ENST00000562576 SFRP2Q96HF1 295 aa3.97□□□□□ -1.77
CNEP1R1-204ENST00000562576 SCGB3A2Q96PL1 93 aa3.97□□□□□ -1.77
CNEP1R1-204ENST00000562576 FUNDC2Q9BWH2 189 aa3.97□□□□□ -1.77
CNEP1R1-204ENST00000562576 FLVCR2Q9UPI3 526 aa3.97□□□□□ -1.77
CNEP1R1-204ENST00000562576 IGKV3OR2-268A0A0C4DH90 116 aa3.96□□□□□ -1.78
CNEP1R1-204ENST00000562576 C9orf170A2RU37 121 aa3.96□□□□□ -1.78
CNEP1R1-204ENST00000562576 OR7C2O60412 319 aa3.96□□□□□ -1.78
CNEP1R1-204ENST00000562576 ARMS2P0C7Q2 107 aa3.96□□□□□ -1.78
CNEP1R1-204ENST00000562576 BCAP31P51572 246 aa3.96□□□□□ -1.78
CNEP1R1-204ENST00000562576 UBE2D1P51668 147 aa3.96□□□□□ -1.78
CNEP1R1-204ENST00000562576 TAS2R30P59541 319 aa3.96□□□□□ -1.78
CNEP1R1-204ENST00000562576 DEFA3P59666 94 aa3.96□□□□□ -1.78
CNEP1R1-204ENST00000562576 OR10G8Q8NGN5 311 aa3.96□□□□□ -1.78
CNEP1R1-204ENST00000562576 MCFD2Q8NI22 146 aa3.96□□□□□ -1.78
CNEP1R1-204ENST00000562576 DYNC2LI1Q8TCX1 351 aa3.96□□□□□ -1.78
CNEP1R1-204ENST00000562576 SDHCQ99643 169 aaPredicted RBP3.96□□□□□ -1.78
CNEP1R1-204ENST00000562576 RABL2AQ9UBK7 228 aaPredicted RBP3.96□□□□□ -1.78
CNEP1R1-204ENST00000562576 RAB26Q9ULW5 256 aa3.96□□□□□ -1.78
CNEP1R1-204ENST00000562576 LSM5Q9Y4Y9 91 aaKnown RBP3.96□□□□□ -1.78
CNEP1R1-204ENST00000562576 MACF1Q9UPN3 7388 aaKnown RBP3.96□□□□□ -1.78
CNEP1R1-204ENST00000562576 A0A087X002 238 aa3.95□□□□□ -1.78
CNEP1R1-204ENST00000562576 M0R381 172 aa3.95□□□□□ -1.78
CNEP1R1-204ENST00000562576 CRYGAP11844 174 aa3.95□□□□□ -1.78
CNEP1R1-204ENST00000562576 S100A4P26447 101 aaKnown RBP3.95□□□□□ -1.78
CNEP1R1-204ENST00000562576 S100A10P60903 97 aa3.95□□□□□ -1.78
CNEP1R1-204ENST00000562576 UBE2L3P68036 154 aaKnown RBP3.95□□□□□ -1.78
CNEP1R1-204ENST00000562576 IL18Q14116 193 aa3.95□□□□□ -1.78
CNEP1R1-204ENST00000562576 C9orf116Q5BN46 136 aaPredicted RBP3.95□□□□□ -1.78
CNEP1R1-204ENST00000562576 DERL1Q9BUN8 251 aa3.95□□□□□ -1.78
CNEP1R1-204ENST00000562576 ZNF471Q9BX82 626 aaPredicted RBP3.95□□□□□ -1.78
CNEP1R1-204ENST00000562576 NPCDR1Q9BY65 106 aa3.95□□□□□ -1.78
CNEP1R1-204ENST00000562576 MBD2Q9UBB5 411 aa3.95□□□□□ -1.78
CNEP1R1-204ENST00000562576 IGLV7-46A0A075B6I9 117 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms