RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 DEFB112Q30KQ8 113 aa2.81□□□□□ -1.96
LRRC28-222ENST00000561431 XAF1Q6GPH4 301 aa2.81□□□□□ -1.96
LRRC28-222ENST00000561431 LAIR2Q6ISS4 152 aa2.81□□□□□ -1.96
LRRC28-222ENST00000561431 EBLN2Q6P2I7 272 aa2.81□□□□□ -1.96
LRRC28-222ENST00000561431 VMO1Q7Z5L0 202 aa2.81□□□□□ -1.96
LRRC28-222ENST00000561431 TRAPPC6BQ86SZ2 158 aa2.81□□□□□ -1.96
LRRC28-222ENST00000561431 SAXO1Q8IYX7 474 aa2.81□□□□□ -1.96
LRRC28-222ENST00000561431 TMEM61Q8N0U2 210 aa2.81□□□□□ -1.96
LRRC28-222ENST00000561431 BANF2Q9H503 90 aa2.81□□□□□ -1.96
LRRC28-222ENST00000561431 CKLFQ9UBR5 152 aa2.81□□□□□ -1.96
LRRC28-222ENST00000561431 ZNF706Q9Y5V0 76 aaPredicted RBP2.81□□□□□ -1.96
LRRC28-222ENST00000561431 ARHGAP32A7KAX9 2087 aa2.8□□□□□ -1.96
LRRC28-222ENST00000561431 IGKV1-12A0A0C4DH73 117 aa2.8□□□□□ -1.96
LRRC28-222ENST00000561431 OR2T8A6NH00 312 aa2.8□□□□□ -1.96
LRRC28-222ENST00000561431 ZNF727A8MUV8 499 aa2.8□□□□□ -1.96
LRRC28-222ENST00000561431 ZNF705GA8MUZ8 300 aaPredicted RBP2.8□□□□□ -1.96
LRRC28-222ENST00000561431 J3QLW9 94 aa2.8□□□□□ -1.96
LRRC28-222ENST00000561431 M0R1W7 72 aa2.8□□□□□ -1.96
LRRC28-222ENST00000561431 TAX1BP3O14907 124 aa2.8□□□□□ -1.96
LRRC28-222ENST00000561431 NAPSAO96009 420 aa2.8□□□□□ -1.96
LRRC28-222ENST00000561431 IGKV1-5P01602 117 aa2.8□□□□□ -1.96
LRRC28-222ENST00000561431 IGKV1D-12P01611 117 aa2.8□□□□□ -1.96
LRRC28-222ENST00000561431 CD2P06729 351 aa2.8□□□□□ -1.96
LRRC28-222ENST00000561431 SPINK8P0C7L1 97 aa2.8□□□□□ -1.96
LRRC28-222ENST00000561431 IL7P13232 177 aa2.8□□□□□ -1.96
LRRC28-222ENST00000561431 NDPQ00604 133 aa2.8□□□□□ -1.96
LRRC28-222ENST00000561431 CATR1Q13166 79 aa2.8□□□□□ -1.96
LRRC28-222ENST00000561431 SP6Q3SY56 376 aa2.8□□□□□ -1.96
LRRC28-222ENST00000561431 FAM74A1Q5RGS3 127 aa2.8□□□□□ -1.96
LRRC28-222ENST00000561431 C9orf129Q5T035 196 aaKnown RBP2.8□□□□□ -1.96
LRRC28-222ENST00000561431 SLC25A26Q70HW3 274 aa2.8□□□□□ -1.96
LRRC28-222ENST00000561431 H1FXQ92522 213 aaKnown RBP2.8□□□□□ -1.96
LRRC28-222ENST00000561431 LINC00052Q96N35 136 aa2.8□□□□□ -1.96
LRRC28-222ENST00000561431 ZNF586Q9NXT0 402 aa2.8□□□□□ -1.96
LRRC28-222ENST00000561431 ZNRD1Q9P1U0 126 aa2.8□□□□□ -1.96
LRRC28-222ENST00000561431 COMMD3Q9UBI1 195 aa2.8□□□□□ -1.96
LRRC28-222ENST00000561431 MRPS16Q9Y3D3 137 aaKnown RBP2.8□□□□□ -1.96
LRRC28-222ENST00000561431 VWFP04275 2813 aa2.8□□□□□ -1.96
LRRC28-222ENST00000561431 C17orf98A8MV24 154 aa2.79□□□□□ -1.96
LRRC28-222ENST00000561431 ODF3BA8MYP8 253 aa2.79□□□□□ -1.96
LRRC28-222ENST00000561431 G3V3Q6 166 aa2.79□□□□□ -1.96
LRRC28-222ENST00000561431 M0R378 163 aa2.79□□□□□ -1.96
LRRC28-222ENST00000561431 CST7O76096 145 aa2.79□□□□□ -1.96
LRRC28-222ENST00000561431 IGHV3-23P01764 117 aa2.79□□□□□ -1.96
LRRC28-222ENST00000561431 SRP19P09132 144 aaKnown RBP2.79□□□□□ -1.96
LRRC28-222ENST00000561431 PIPP12273 146 aaPredicted RBP2.79□□□□□ -1.96
LRRC28-222ENST00000561431 CCL3L1P16619 93 aa2.79□□□□□ -1.96
LRRC28-222ENST00000561431 LGALS3P17931 250 aaKnown RBP2.79□□□□□ -1.96
LRRC28-222ENST00000561431 MDKP21741 143 aaPredicted RBP2.79□□□□□ -1.96
LRRC28-222ENST00000561431 NMUP48645 174 aa2.79□□□□□ -1.96
LRRC28-222ENST00000561431 HES1Q14469 280 aa2.79□□□□□ -1.96
LRRC28-222ENST00000561431 CDK5R1Q15078 307 aa2.79□□□□□ -1.96
LRRC28-222ENST00000561431 ZNF79Q15937 498 aa2.79□□□□□ -1.96
LRRC28-222ENST00000561431 LCE3AQ5TA76 89 aa2.79□□□□□ -1.96
LRRC28-222ENST00000561431 MORN3Q6PF18 240 aaPredicted RBP2.79□□□□□ -1.96
LRRC28-222ENST00000561431 PHF5AQ7RTV0 110 aaKnown RBP2.79□□□□□ -1.96
LRRC28-222ENST00000561431 LINC00305Q7Z4B0 112 aa2.79□□□□□ -1.96
LRRC28-222ENST00000561431 Q8IYB0 196 aa2.79□□□□□ -1.96
LRRC28-222ENST00000561431 OR5AK2Q8NH90 309 aa2.79□□□□□ -1.96
LRRC28-222ENST00000561431 DCANP1Q8TF63 244 aa2.79□□□□□ -1.96
LRRC28-222ENST00000561431 RAB2BQ8WUD1 216 aa2.79□□□□□ -1.96
LRRC28-222ENST00000561431 BRK1Q8WUW1 75 aa2.79□□□□□ -1.96
LRRC28-222ENST00000561431 CIB3Q96Q77 187 aaPredicted RBP2.79□□□□□ -1.96
LRRC28-222ENST00000561431 TIMM17AQ99595 171 aa2.79□□□□□ -1.96
LRRC28-222ENST00000561431 GINS4Q9BRT9 223 aa2.79□□□□□ -1.96
LRRC28-222ENST00000561431 TP73-AS1Q9UF72 201 aa2.79□□□□□ -1.96
LRRC28-222ENST00000561431 CELA1Q9UNI1 258 aa2.79□□□□□ -1.96
LRRC28-222ENST00000561431 TRAV13-1A0A0B4J241 112 aa2.78□□□□□ -1.96
LRRC28-222ENST00000561431 A0A1B0GW54 56 aa2.78□□□□□ -1.96
LRRC28-222ENST00000561431 A8MWV9 139 aa2.78□□□□□ -1.96
LRRC28-222ENST00000561431 PLA2G10O15496 165 aa2.78□□□□□ -1.96
LRRC28-222ENST00000561431 SOCS1O15524 211 aa2.78□□□□□ -1.96
LRRC28-222ENST00000561431 RBP4P02753 201 aa2.78□□□□□ -1.96
LRRC28-222ENST00000561431 CD7P09564 240 aa2.78□□□□□ -1.96
LRRC28-222ENST00000561431 IGLC1P0CG04 106 aa2.78□□□□□ -1.96
LRRC28-222ENST00000561431 ZNF705DP0CH99 300 aaPredicted RBP2.78□□□□□ -1.96
LRRC28-222ENST00000561431 IGHV1-8P0DP01 117 aa2.78□□□□□ -1.96
LRRC28-222ENST00000561431 FABP2P12104 132 aa2.78□□□□□ -1.96
LRRC28-222ENST00000561431 IFITM1P13164 125 aa2.78□□□□□ -1.96
LRRC28-222ENST00000561431 HIST1H2BOP23527 126 aa2.78□□□□□ -1.96
LRRC28-222ENST00000561431 HIST1H2BBP33778 126 aa2.78□□□□□ -1.96
LRRC28-222ENST00000561431 ZNF80P51504 273 aaPredicted RBP2.78□□□□□ -1.96
LRRC28-222ENST00000561431 HIST1H2BDP58876 126 aa2.78□□□□□ -1.96
LRRC28-222ENST00000561431 HIST1H2BCP62807 126 aa2.78□□□□□ -1.96
LRRC28-222ENST00000561431 EIF5AP63241 154 aaKnown RBP2.78□□□□□ -1.96
LRRC28-222ENST00000561431 CCL20P78556 96 aa2.78□□□□□ -1.96
LRRC28-222ENST00000561431 KISS1Q15726 138 aa2.78□□□□□ -1.96
LRRC28-222ENST00000561431 HIST2H2BEQ16778 126 aa2.78□□□□□ -1.96
LRRC28-222ENST00000561431 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.78□□□□□ -1.96
LRRC28-222ENST00000561431 EIF5AL1Q6IS14 154 aaKnown RBP2.78□□□□□ -1.96
LRRC28-222ENST00000561431 Q6P435 159 aa2.78□□□□□ -1.96
LRRC28-222ENST00000561431 IZUMO2Q6UXV1 221 aa2.78□□□□□ -1.96
LRRC28-222ENST00000561431 LYPD6Q86Y78 171 aa2.78□□□□□ -1.96
LRRC28-222ENST00000561431 GPHB5Q86YW7 130 aa2.78□□□□□ -1.96
LRRC28-222ENST00000561431 CEND1Q8N111 149 aa2.78□□□□□ -1.96
LRRC28-222ENST00000561431 DYNAPQ8N1N2 210 aa2.78□□□□□ -1.96
LRRC28-222ENST00000561431 KCNRGQ8N5I3 272 aa2.78□□□□□ -1.96
LRRC28-222ENST00000561431 C3orf56Q8N813 242 aa2.78□□□□□ -1.96
LRRC28-222ENST00000561431 OR8A1Q8NGG7 326 aa2.78□□□□□ -1.96
LRRC28-222ENST00000561431 HIST1H2BHQ93079 126 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms