RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 C7orf33Q8WU49 177 aa3.15□□□□□ -1.91
HMGB3P26-201ENST00000560051 RETNLBQ9BQ08 111 aa3.15□□□□□ -1.91
HMGB3P26-201ENST00000560051 SAMD9LQ8IVG5 1584 aa3.15□□□□□ -1.91
HMGB3P26-201ENST00000560051 PHRF1Q9P1Y6 1649 aaKnown RBP3.15□□□□□ -1.91
HMGB3P26-201ENST00000560051 ARFGEF1Q9Y6D6 1849 aa3.14□□□□□ -1.91
HMGB3P26-201ENST00000560051 E9PCH4 1651 aa3.14□□□□□ -1.91
HMGB3P26-201ENST00000560051 SLIT1O75093 1534 aa3.14□□□□□ -1.91
HMGB3P26-201ENST00000560051 DSCAMO60469 2012 aa3.14□□□□□ -1.91
HMGB3P26-201ENST00000560051 IGKV3D-20A0A0C4DH25 116 aa3.14□□□□□ -1.91
HMGB3P26-201ENST00000560051 RPL37AP8A6NKH3 93 aa3.14□□□□□ -1.91
HMGB3P26-201ENST00000560051 BPY2O14599 106 aa3.14□□□□□ -1.91
HMGB3P26-201ENST00000560051 IGHV4-34P06331 123 aa3.14□□□□□ -1.91
HMGB3P26-201ENST00000560051 MDKP21741 143 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P26-201ENST00000560051 CD24P25063 80 aa3.14□□□□□ -1.91
HMGB3P26-201ENST00000560051 FXYD2P54710 66 aa3.14□□□□□ -1.91
HMGB3P26-201ENST00000560051 SYCNQ0VAF6 134 aa3.14□□□□□ -1.91
HMGB3P26-201ENST00000560051 KISS1Q15726 138 aa3.14□□□□□ -1.91
HMGB3P26-201ENST00000560051 C9orf116Q5BN46 136 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P26-201ENST00000560051 NCBP2-AS2Q69YL0 99 aa3.14□□□□□ -1.91
HMGB3P26-201ENST00000560051 IGFL3Q6UXB1 125 aa3.14□□□□□ -1.91
HMGB3P26-201ENST00000560051 KRTAP2-2Q9BYT5 123 aa3.14□□□□□ -1.91
HMGB3P26-201ENST00000560051 CDC42SE1Q9NRR8 79 aa3.14□□□□□ -1.91
HMGB3P26-201ENST00000560051 LINC00474Q9P2X8 69 aa3.14□□□□□ -1.91
HMGB3P26-201ENST00000560051 COL14A1Q05707 1796 aaKnown RBP3.14□□□□□ -1.91
HMGB3P26-201ENST00000560051 COL2A1P02458 1487 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P26-201ENST00000560051 MUC4Q99102 2169 aa3.14□□□□□ -1.91
HMGB3P26-201ENST00000560051 NHSQ6T4R5 1651 aa3.14□□□□□ -1.91
HMGB3P26-201ENST00000560051 RREB1Q92766 1687 aa3.14□□□□□ -1.91
HMGB3P26-201ENST00000560051 GBF1Q92538 1859 aa3.13□□□□□ -1.91
HMGB3P26-201ENST00000560051 SVILO95425 2214 aa3.13□□□□□ -1.91
HMGB3P26-201ENST00000560051 IGLV3-32A0A0A0MS00 114 aa3.13□□□□□ -1.91
HMGB3P26-201ENST00000560051 IQCF6A8MYZ5 107 aa3.13□□□□□ -1.91
HMGB3P26-201ENST00000560051 ZNF818PQ6ZRF7 136 aa3.13□□□□□ -1.91
HMGB3P26-201ENST00000560051 C8orf17Q9NRJ1 99 aa3.13□□□□□ -1.91
HMGB3P26-201ENST00000560051 LAMB2P55268 1798 aa3.12□□□□□ -1.91
HMGB3P26-201ENST00000560051 ATAD5Q96QE3 1844 aa3.12□□□□□ -1.91
HMGB3P26-201ENST00000560051 IGKV2D-30A0A075B6S6 120 aa3.12□□□□□ -1.91
HMGB3P26-201ENST00000560051 A0A0J9YXY3 114 aa3.12□□□□□ -1.91
HMGB3P26-201ENST00000560051 SMIM1B2RUZ4 78 aa3.12□□□□□ -1.91
HMGB3P26-201ENST00000560051 PRAC2D3DTV9 90 aa3.12□□□□□ -1.91
HMGB3P26-201ENST00000560051 IGHV3-23P01764 117 aa3.12□□□□□ -1.91
HMGB3P26-201ENST00000560051 IGHV1-8P0DP01 117 aa3.12□□□□□ -1.91
HMGB3P26-201ENST00000560051 MIFP14174 115 aa3.12□□□□□ -1.91
HMGB3P26-201ENST00000560051 SERF2P84101 59 aa3.12□□□□□ -1.91
HMGB3P26-201ENST00000560051 CLECL1Q8IZS7 167 aa3.12□□□□□ -1.91
HMGB3P26-201ENST00000560051 ZNF414Q96IQ9 312 aa3.12□□□□□ -1.91
HMGB3P26-201ENST00000560051 C1orf147Q96MC9 270 aaPredicted RBP3.12□□□□□ -1.91
HMGB3P26-201ENST00000560051 CYSTM1Q9H1C7 97 aa3.12□□□□□ -1.91
HMGB3P26-201ENST00000560051 THSD7BQ9C0I4 1608 aa3.11□□□□□ -1.91
HMGB3P26-201ENST00000560051 MGAMO43451 1857 aa3.11□□□□□ -1.91
HMGB3P26-201ENST00000560051 SPTBP11277 2137 aa3.11□□□□□ -1.91
HMGB3P26-201ENST00000560051 KIAA0100Q14667 2235 aaKnown RBP3.11□□□□□ -1.91
HMGB3P26-201ENST00000560051 IGLV3-12A0A075B6K2 115 aa3.11□□□□□ -1.91
HMGB3P26-201ENST00000560051 IGHV5-10-1A0A0J9YXX1 117 aa3.11□□□□□ -1.91
HMGB3P26-201ENST00000560051 HCG22E2RYF7 251 aa3.11□□□□□ -1.91
HMGB3P26-201ENST00000560051 H3BVH4 76 aa3.11□□□□□ -1.91
HMGB3P26-201ENST00000560051 IGLV2-23P01705 113 aa3.11□□□□□ -1.91
HMGB3P26-201ENST00000560051 UBE2D1P51668 147 aa3.11□□□□□ -1.91
HMGB3P26-201ENST00000560051 EIF4EBP1Q13541 118 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P26-201ENST00000560051 KRTAP27-1Q3LI81 207 aa3.11□□□□□ -1.91
HMGB3P26-201ENST00000560051 LUZP6Q538Z0 58 aa3.11□□□□□ -1.91
HMGB3P26-201ENST00000560051 RNASE13Q5GAN3 156 aaKnown RBP3.11□□□□□ -1.91
HMGB3P26-201ENST00000560051 LCE1EQ5T753 118 aa3.11□□□□□ -1.91
HMGB3P26-201ENST00000560051 FAM223AQ8IWN6 122 aa3.11□□□□□ -1.91
HMGB3P26-201ENST00000560051 C20orf197Q8N268 126 aa3.11□□□□□ -1.91
HMGB3P26-201ENST00000560051 Q8N6K4 173 aa3.11□□□□□ -1.91
HMGB3P26-201ENST00000560051 ZNF525Q8N782 197 aa3.11□□□□□ -1.91
HMGB3P26-201ENST00000560051 RPP21Q9H633 154 aaKnown RBP3.11□□□□□ -1.91
HMGB3P26-201ENST00000560051 C14orf132Q9NPU4 83 aa3.11□□□□□ -1.91
HMGB3P26-201ENST00000560051 DIDO1Q9BTC0 2240 aaKnown RBP3.11□□□□□ -1.91
HMGB3P26-201ENST00000560051 TET2Q6N021 2002 aaPredicted RBP3.1□□□□□ -1.91
HMGB3P26-201ENST00000560051 CD163L1Q9NR16 1453 aa3.1□□□□□ -1.91
HMGB3P26-201ENST00000560051 PLXNA2O75051 1894 aa3.1□□□□□ -1.91
HMGB3P26-201ENST00000560051 IGLV11-55A0A075B6I3 123 aa3.1□□□□□ -1.91
HMGB3P26-201ENST00000560051 IGHV5-51A0A0C4DH38 117 aa3.1□□□□□ -1.91
HMGB3P26-201ENST00000560051 LOC107984156A0A0G2JMH3 177 aa3.1□□□□□ -1.91
HMGB3P26-201ENST00000560051 TMEM223A0PJW6 202 aa3.1□□□□□ -1.91
HMGB3P26-201ENST00000560051 TMEM30CPA0ZSE6 113 aa3.1□□□□□ -1.91
HMGB3P26-201ENST00000560051 ZNF815PA8K554 130 aa3.1□□□□□ -1.91
HMGB3P26-201ENST00000560051 TMEM14DPA8MWL7 114 aa3.1□□□□□ -1.91
HMGB3P26-201ENST00000560051 C16orf90A8MZG2 172 aa3.1□□□□□ -1.91
HMGB3P26-201ENST00000560051 CASC2Q6XLA1 102 aa3.1□□□□□ -1.91
HMGB3P26-201ENST00000560051 ARL17AQ8IVW1 177 aa3.1□□□□□ -1.91
HMGB3P26-201ENST00000560051 Q8N814 137 aa3.1□□□□□ -1.91
HMGB3P26-201ENST00000560051 TTTY13Q9BZ97 58 aa3.1□□□□□ -1.91
HMGB3P26-201ENST00000560051 DEC1Q9P2X7 70 aa3.1□□□□□ -1.91
HMGB3P26-201ENST00000560051 GREB1Q4ZG55 1949 aa3.1□□□□□ -1.91
HMGB3P26-201ENST00000560051 NOTCH4Q99466 2003 aa3.1□□□□□ -1.91
HMGB3P26-201ENST00000560051 LRP5O75197 1615 aa3.09□□□□□ -1.91
HMGB3P26-201ENST00000560051 MYOFQ9NZM1 2061 aa3.09□□□□□ -1.91
HMGB3P26-201ENST00000560051 ADAMTS7Q9UKP4 1686 aa3.09□□□□□ -1.91
HMGB3P26-201ENST00000560051 TRAV23DV6A0A075B6W5 121 aa3.09□□□□□ -1.91
HMGB3P26-201ENST00000560051 IGHV3-73A0A0B4J1V6 119 aa3.09□□□□□ -1.91
HMGB3P26-201ENST00000560051 IGHV1-3A0A0C4DH29 117 aa3.09□□□□□ -1.91
HMGB3P26-201ENST00000560051 LY6HO94772 140 aa3.09□□□□□ -1.91
HMGB3P26-201ENST00000560051 PPYP01298 95 aa3.09□□□□□ -1.91
HMGB3P26-201ENST00000560051 IGHV1-46P01743 117 aa3.09□□□□□ -1.91
HMGB3P26-201ENST00000560051 EDDM3BP56851 147 aa3.09□□□□□ -1.91
HMGB3P26-201ENST00000560051 SUPT4H1P63272 117 aaKnown RBP3.09□□□□□ -1.91
HMGB3P26-201ENST00000560051 C2orf82Q6UX34 121 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms