RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 NMBP08949 121 aa1.94□□□□□ -2.1
SLIRP-202ENST00000553981 KRTAP1-4P0C5Y4 121 aa1.94□□□□□ -2.1
SLIRP-202ENST00000553981 NBEAP1P0C6P0 100 aa1.94□□□□□ -2.1
SLIRP-202ENST00000553981 ANXA3P12429 323 aa1.94□□□□□ -2.1
SLIRP-202ENST00000553981 CRIP1P50238 77 aa1.94□□□□□ -2.1
SLIRP-202ENST00000553981 PPT1P50897 306 aa1.94□□□□□ -2.1
SLIRP-202ENST00000553981 TAS2R30P59541 319 aa1.94□□□□□ -2.1
SLIRP-202ENST00000553981 RANP62826 216 aaKnown RBP1.94□□□□□ -2.1
SLIRP-202ENST00000553981 SRPXP78539 464 aa1.94□□□□□ -2.1
SLIRP-202ENST00000553981 LAGE3Q14657 143 aa1.94□□□□□ -2.1
SLIRP-202ENST00000553981 IAH1Q2TAA2 248 aaPredicted RBP1.94□□□□□ -2.1
SLIRP-202ENST00000553981 Q6ZRU5 148 aa1.94□□□□□ -2.1
SLIRP-202ENST00000553981 NTM-AS1Q6ZSK4 140 aa1.94□□□□□ -2.1
SLIRP-202ENST00000553981 C9orf163Q8N9P6 203 aa1.94□□□□□ -2.1
SLIRP-202ENST00000553981 OR2T35Q8NGX2 323 aa1.94□□□□□ -2.1
SLIRP-202ENST00000553981 MCFD2Q8NI22 146 aa1.94□□□□□ -2.1
SLIRP-202ENST00000553981 MITD1Q8WV92 249 aa1.94□□□□□ -2.1
SLIRP-202ENST00000553981 TXNDC17Q9BRA2 123 aa1.94□□□□□ -2.1
SLIRP-202ENST00000553981 SPXQ9BT56 116 aa1.94□□□□□ -2.1
SLIRP-202ENST00000553981 PAXXQ9BUH6 204 aa1.94□□□□□ -2.1
SLIRP-202ENST00000553981 NPCDR1Q9BY65 106 aa1.94□□□□□ -2.1
SLIRP-202ENST00000553981 OR51M1Q9H341 326 aa1.94□□□□□ -2.1
SLIRP-202ENST00000553981 Q9H521 79 aa1.94□□□□□ -2.1
SLIRP-202ENST00000553981 WFDC1Q9HC57 220 aa1.94□□□□□ -2.1
SLIRP-202ENST00000553981 GSKIPQ9P0R6 139 aa1.94□□□□□ -2.1
SLIRP-202ENST00000553981 NAGKQ9UJ70 344 aa1.94□□□□□ -2.1
SLIRP-202ENST00000553981 RPH3ALQ9UNE2 315 aa1.94□□□□□ -2.1
SLIRP-202ENST00000553981 LSM5Q9Y4Y9 91 aaKnown RBP1.94□□□□□ -2.1
SLIRP-202ENST00000553981 IGKV2D-24A0A075B6R9 120 aa1.93□□□□□ -2.1
SLIRP-202ENST00000553981 TRAV8-6A0A0B4J262 113 aa1.93□□□□□ -2.1
SLIRP-202ENST00000553981 C5orf51A6NDU8 294 aa1.93□□□□□ -2.1
SLIRP-202ENST00000553981 FBLL1A6NHQ2 334 aaKnown RBP1.93□□□□□ -2.1
SLIRP-202ENST00000553981 PHOX2AO14813 284 aa1.93□□□□□ -2.1
SLIRP-202ENST00000553981 HMGB3O15347 200 aaKnown RBP1.93□□□□□ -2.1
SLIRP-202ENST00000553981 SIX6O95475 246 aa1.93□□□□□ -2.1
SLIRP-202ENST00000553981 FGF7P21781 194 aa1.93□□□□□ -2.1
SLIRP-202ENST00000553981 INPP1P49441 399 aa1.93□□□□□ -2.1
SLIRP-202ENST00000553981 BAXQ07812 192 aa1.93□□□□□ -2.1
SLIRP-202ENST00000553981 SRSF9Q13242 221 aaKnown RBP eCLIP1.93□□□□□ -2.1
SLIRP-202ENST00000553981 PDE6HQ13956 83 aa1.93□□□□□ -2.1
SLIRP-202ENST00000553981 GUK1Q16774 197 aa1.93□□□□□ -2.1
SLIRP-202ENST00000553981 MPV17L2Q567V2 206 aa1.93□□□□□ -2.1
SLIRP-202ENST00000553981 TMEM78Q5T7P6 136 aa1.93□□□□□ -2.1
SLIRP-202ENST00000553981 FAM159AQ6UWV7 190 aa1.93□□□□□ -2.1
SLIRP-202ENST00000553981 TOMM5Q8N4H5 51 aa1.93□□□□□ -2.1
SLIRP-202ENST00000553981 Q8N976 141 aa1.93□□□□□ -2.1
SLIRP-202ENST00000553981 PCNPQ8WW12 178 aaKnown RBP1.93□□□□□ -2.1
SLIRP-202ENST00000553981 AP3S1Q92572 193 aa1.93□□□□□ -2.1
SLIRP-202ENST00000553981 UBE2WQ96B02 151 aa1.93□□□□□ -2.1
SLIRP-202ENST00000553981 SCGB3A2Q96PL1 93 aa1.93□□□□□ -2.1
SLIRP-202ENST00000553981 SLC25A21Q9BQT8 299 aaPredicted RBP1.93□□□□□ -2.1
SLIRP-202ENST00000553981 GGACTQ9BVM4 153 aa1.93□□□□□ -2.1
SLIRP-202ENST00000553981 C20orf85Q9H1P6 137 aa1.93□□□□□ -2.1
SLIRP-202ENST00000553981 UQCC1Q9NVA1 299 aa1.93□□□□□ -2.1
SLIRP-202ENST00000553981 OR5AC2Q9NZP5 309 aa1.93□□□□□ -2.1
SLIRP-202ENST00000553981 CACFD1Q9UGQ2 172 aa1.93□□□□□ -2.1
SLIRP-202ENST00000553981 PRELID1Q9Y255 219 aa1.93□□□□□ -2.1
SLIRP-202ENST00000553981 TIMM9Q9Y5J7 89 aa1.93□□□□□ -2.1
SLIRP-202ENST00000553981 KIF25-AS1Q9Y6Z4 181 aa1.93□□□□□ -2.1
SLIRP-202ENST00000553981 TRAV8-3A0A0A6YYJ7 113 aa1.92□□□□□ -2.1
SLIRP-202ENST00000553981 TRBV7-9A0A0J9YWB2 115 aa1.92□□□□□ -2.1
SLIRP-202ENST00000553981 A0A0J9YXV3 536 aa1.92□□□□□ -2.1
SLIRP-202ENST00000553981 RBAKDNA6NC62 111 aa1.92□□□□□ -2.1
SLIRP-202ENST00000553981 PGPA6NDG6 321 aa1.92□□□□□ -2.1
SLIRP-202ENST00000553981 PFN1P07737 140 aaKnown RBP1.92□□□□□ -2.1
SLIRP-202ENST00000553981 BCAP31P51572 246 aa1.92□□□□□ -2.1
SLIRP-202ENST00000553981 PNRC1Q12796 327 aaPredicted RBP1.92□□□□□ -2.1
SLIRP-202ENST00000553981 ASAH1Q13510 395 aa1.92□□□□□ -2.1
SLIRP-202ENST00000553981 RHOHQ15669 191 aa1.92□□□□□ -2.1
SLIRP-202ENST00000553981 PYDC2Q56P42 97 aa1.92□□□□□ -2.1
SLIRP-202ENST00000553981 LCE1CQ5T751 118 aa1.92□□□□□ -2.1
SLIRP-202ENST00000553981 LCE1BQ5T7P3 118 aa1.92□□□□□ -2.1
SLIRP-202ENST00000553981 MZT2BQ6NZ67 158 aa1.92□□□□□ -2.1
SLIRP-202ENST00000553981 CFAP161Q6P656 301 aa1.92□□□□□ -2.1
SLIRP-202ENST00000553981 CLPSL2Q6UWE3 100 aa1.92□□□□□ -2.1
SLIRP-202ENST00000553981 Q6ZRG5 221 aa1.92□□□□□ -2.1
SLIRP-202ENST00000553981 GOLT1AQ6ZVE7 132 aa1.92□□□□□ -2.1
SLIRP-202ENST00000553981 KRTAP11-1Q8IUC1 163 aa1.92□□□□□ -2.1
SLIRP-202ENST00000553981 CYB561D1Q8N8Q1 229 aa1.92□□□□□ -2.1
SLIRP-202ENST00000553981 OR1L4Q8NGR5 311 aa1.92□□□□□ -2.1
SLIRP-202ENST00000553981 SPACA4Q8TDM5 124 aa1.92□□□□□ -2.1
SLIRP-202ENST00000553981 C15orf40Q8WUR7 153 aa1.92□□□□□ -2.1
SLIRP-202ENST00000553981 HYLS1Q96M11 299 aa1.92□□□□□ -2.1
SLIRP-202ENST00000553981 PFDN5Q99471 154 aa1.92□□□□□ -2.1
SLIRP-202ENST00000553981 ZNF471Q9BX82 626 aaPredicted RBP1.92□□□□□ -2.1
SLIRP-202ENST00000553981 WDR61Q9GZS3 305 aaKnown RBP1.92□□□□□ -2.1
SLIRP-202ENST00000553981 LYRM2Q9NU23 88 aaPredicted RBP1.92□□□□□ -2.1
SLIRP-202ENST00000553981 RSL24D1Q9UHA3 163 aaKnown RBP1.92□□□□□ -2.1
SLIRP-202ENST00000553981 IGLV4-60A0A075B6I1 120 aa1.91□□□□□ -2.1
SLIRP-202ENST00000553981 TRAV6A0A075B6T7 132 aa1.91□□□□□ -2.1
SLIRP-202ENST00000553981 TRAV34A0A0B4J273 112 aa1.91□□□□□ -2.1
SLIRP-202ENST00000553981 TRAV21A0A0B4J279 112 aa1.91□□□□□ -2.1
SLIRP-202ENST00000553981 GGTLC3B5MD39 225 aa1.91□□□□□ -2.1
SLIRP-202ENST00000553981 SULT1A1P50225 295 aa1.91□□□□□ -2.1
SLIRP-202ENST00000553981 DEFA3P59666 94 aa1.91□□□□□ -2.1
SLIRP-202ENST00000553981 RAB2AP61019 212 aa1.91□□□□□ -2.1
SLIRP-202ENST00000553981 UBE2D3P61077 147 aa1.91□□□□□ -2.1
SLIRP-202ENST00000553981 UBE2D2P62837 147 aa1.91□□□□□ -2.1
SLIRP-202ENST00000553981 PRR3P79522 188 aaKnown RBP1.91□□□□□ -2.1
SLIRP-202ENST00000553981 C20orf203Q8NBC4 194 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 280.6 ms