RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 SCN7AQ01118 1682 aa2.61□□□□□ -1.99
USP44-208ENST00000552440 ZDBF2Q9HCK1 2354 aa2.61□□□□□ -1.99
USP44-208ENST00000552440 EPG5Q9HCE0 2579 aa2.61□□□□□ -1.99
USP44-208ENST00000552440 UNC79Q9P2D8 2635 aa2.61□□□□□ -1.99
USP44-208ENST00000552440 SSSCA1O60232 199 aa2.61□□□□□ -1.99
USP44-208ENST00000552440 PROSCO94903 275 aa2.61□□□□□ -1.99
USP44-208ENST00000552440 CRPP02741 224 aa2.61□□□□□ -1.99
USP44-208ENST00000552440 SNCAP37840 140 aa2.61□□□□□ -1.99
USP44-208ENST00000552440 PEA15Q15121 130 aa2.61□□□□□ -1.99
USP44-208ENST00000552440 SPRNQ5BIV9 151 aa2.61□□□□□ -1.99
USP44-208ENST00000552440 SBSPONQ8IVN8 264 aa2.61□□□□□ -1.99
USP44-208ENST00000552440 NUP214P35658 2090 aaPredicted RBP2.61□□□□□ -1.99
USP44-208ENST00000552440 ATRXP46100 2492 aa2.61□□□□□ -1.99
USP44-208ENST00000552440 MYH1P12882 1939 aa2.61□□□□□ -1.99
USP44-208ENST00000552440 GREB1Q4ZG55 1949 aa2.61□□□□□ -1.99
USP44-208ENST00000552440 SCN1AP35498 2009 aa2.6□□□□□ -1.99
USP44-208ENST00000552440 MYO10Q9HD67 2058 aa2.6□□□□□ -1.99
USP44-208ENST00000552440 ARID1AO14497 2285 aa2.6□□□□□ -1.99
USP44-208ENST00000552440 IGLV4-69A0A075B6H9 119 aa2.6□□□□□ -1.99
USP44-208ENST00000552440 LOC107984156A0A0G2JMH3 177 aa2.6□□□□□ -1.99
USP44-208ENST00000552440 MRPS14O60783 128 aaKnown RBP2.6□□□□□ -1.99
USP44-208ENST00000552440 EIF4EBP1Q13541 118 aaPredicted RBP2.6□□□□□ -1.99
USP44-208ENST00000552440 IQCJQ1A5X6 159 aa2.6□□□□□ -1.99
USP44-208ENST00000552440 ZNF720Q7Z2F6 126 aa2.6□□□□□ -1.99
USP44-208ENST00000552440 ARL17AQ8IVW1 177 aa2.6□□□□□ -1.99
USP44-208ENST00000552440 FAM19A2Q8N3H0 131 aa2.6□□□□□ -1.99
USP44-208ENST00000552440 LINC00052Q96N35 136 aa2.6□□□□□ -1.99
USP44-208ENST00000552440 SMIM7Q9BQ49 75 aa2.6□□□□□ -1.99
USP44-208ENST00000552440 CXCL16Q9H2A7 254 aa2.6□□□□□ -1.99
USP44-208ENST00000552440 C14orf132Q9NPU4 83 aa2.6□□□□□ -1.99
USP44-208ENST00000552440 LAMB1P07942 1786 aa2.59□□□□□ -1.99
USP44-208ENST00000552440 TRAV1-1A0A0B4J248 108 aa2.59□□□□□ -1.99
USP44-208ENST00000552440 MGST1P10620 155 aaKnown RBP2.59□□□□□ -1.99
USP44-208ENST00000552440 UNQ5815/PRO19632Q6UWF5 114 aa2.59□□□□□ -1.99
USP44-208ENST00000552440 Q8N8P6 123 aa2.59□□□□□ -1.99
USP44-208ENST00000552440 C10orf82Q8WW14 230 aa2.59□□□□□ -1.99
USP44-208ENST00000552440 OR8B2Q96RD0 313 aa2.59□□□□□ -1.99
USP44-208ENST00000552440 TRANK1O15050 2925 aa2.59□□□□□ -1.99
USP44-208ENST00000552440 HEATR5AQ86XA9 2040 aa2.59□□□□□ -1.99
USP44-208ENST00000552440 PLXNA3P51805 1871 aa2.59□□□□□ -1.99
USP44-208ENST00000552440 ARHGAP21Q5T5U3 1957 aa2.59□□□□□ -2
USP44-208ENST00000552440 DNAH12Q6ZR08 3092 aa2.59□□□□□ -2
USP44-208ENST00000552440 IGKV1D-42A0A075B6H8 117 aa2.58□□□□□ -2
USP44-208ENST00000552440 TRAV14DV4A0A0A6YYC5 116 aa2.58□□□□□ -2
USP44-208ENST00000552440 UBE2L5PA0A1B0GUS4 154 aa2.58□□□□□ -2
USP44-208ENST00000552440 PIRTP0C851 137 aa2.58□□□□□ -2
USP44-208ENST00000552440 PIPP12273 146 aaPredicted RBP2.58□□□□□ -2
USP44-208ENST00000552440 UBE2L3P68036 154 aaKnown RBP2.58□□□□□ -2
USP44-208ENST00000552440 LINC00269Q8N2A0 174 aa2.58□□□□□ -2
USP44-208ENST00000552440 LINC00301Q8NCQ3 95 aa2.58□□□□□ -2
USP44-208ENST00000552440 AGRNO00468 2067 aa2.58□□□□□ -2
USP44-208ENST00000552440 SPTBN4Q9H254 2564 aa2.58□□□□□ -2
USP44-208ENST00000552440 CHD6Q8TD26 2715 aa2.58□□□□□ -2
USP44-208ENST00000552440 PTPRZ1P23471 2315 aaPredicted RBP2.58□□□□□ -2
USP44-208ENST00000552440 IGHV3OR16-8A0A075B7F1 116 aa2.58□□□□□ -2
USP44-208ENST00000552440 K7EP34 96 aa2.58□□□□□ -2
USP44-208ENST00000552440 GNGT2O14610 69 aa2.58□□□□□ -2
USP44-208ENST00000552440 ASIPP42127 132 aa2.58□□□□□ -2
USP44-208ENST00000552440 ATP5EP56381 51 aaPredicted RBP2.58□□□□□ -2
USP44-208ENST00000552440 INSL4Q14641 139 aa2.58□□□□□ -2
USP44-208ENST00000552440 SLC25A26Q70HW3 274 aa2.58□□□□□ -2
USP44-208ENST00000552440 C5orf38Q86SI9 138 aa2.58□□□□□ -2
USP44-208ENST00000552440 LINC00612Q8N6U2 182 aa2.58□□□□□ -2
USP44-208ENST00000552440 C20orf166-AS1Q96NR2 134 aa2.58□□□□□ -2
USP44-208ENST00000552440 S100A13Q99584 98 aa2.58□□□□□ -2
USP44-208ENST00000552440 S4R3C0 116 aa2.58□□□□□ -2
USP44-208ENST00000552440 ZFHX2Q9C0A1 2572 aaPredicted RBP2.58□□□□□ -2
USP44-208ENST00000552440 ARAP2Q8WZ64 1704 aa2.58□□□□□ -2
USP44-208ENST00000552440 CABIN1Q9Y6J0 2220 aa2.57□□□□□ -2
USP44-208ENST00000552440 REV3LO60673 3130 aa2.57□□□□□ -2
USP44-208ENST00000552440 DUOX1Q9NRD9 1551 aa2.57□□□□□ -2
USP44-208ENST00000552440 LCTP09848 1927 aa2.57□□□□□ -2
USP44-208ENST00000552440 DNAH14Q0VDD8 3507 aa2.57□□□□□ -2
USP44-208ENST00000552440 IGHV3-64A0A075B6Q5 118 aa2.57□□□□□ -2
USP44-208ENST00000552440 F8W1H4 67 aa2.57□□□□□ -2
USP44-208ENST00000552440 TRAPPC2P0DI81 140 aa2.57□□□□□ -2
USP44-208ENST00000552440 TRAPPC2BP0DI82 140 aa2.57□□□□□ -2
USP44-208ENST00000552440 RPL26P61254 145 aaKnown RBP2.57□□□□□ -2
USP44-208ENST00000552440 TDRG1Q3Y452 100 aa2.57□□□□□ -2
USP44-208ENST00000552440 SPANXN5Q5MJ07 72 aa2.57□□□□□ -2
USP44-208ENST00000552440 ZNF826PQ6ZT77 177 aa2.57□□□□□ -2
USP44-208ENST00000552440 MCM3APO60318 1980 aa2.57□□□□□ -2
USP44-208ENST00000552440 MYO15AQ9UKN7 3530 aa2.57□□□□□ -2
USP44-208ENST00000552440 ZNF318Q5VUA4 2279 aa2.56□□□□□ -2
USP44-208ENST00000552440 ANKRD11Q6UB99 2663 aaPredicted RBP2.56□□□□□ -2
USP44-208ENST00000552440 C5orf67F2Z3F1 127 aa2.56□□□□□ -2
USP44-208ENST00000552440 UBL3O95164 117 aa2.56□□□□□ -2
USP44-208ENST00000552440 NMBP08949 121 aa2.56□□□□□ -2
USP44-208ENST00000552440 ZNF79Q15937 498 aa2.56□□□□□ -2
USP44-208ENST00000552440 KRTAP25-1Q3LHN0 102 aa2.56□□□□□ -2
USP44-208ENST00000552440 DYNLRB2Q8TF09 96 aa2.56□□□□□ -2
USP44-208ENST00000552440 MUCL1Q96DR8 90 aa2.56□□□□□ -2
USP44-208ENST00000552440 CHD9Q3L8U1 2897 aa2.56□□□□□ -2
USP44-208ENST00000552440 SETXQ7Z333 2677 aaKnown RBP2.56□□□□□ -2
USP44-208ENST00000552440 TRPM6Q9BX84 2022 aa2.56□□□□□ -2
USP44-208ENST00000552440 ZSWIM8A7E2V4 1837 aa2.56□□□□□ -2
USP44-208ENST00000552440 GYPAP02724 150 aa2.56□□□□□ -2
USP44-208ENST00000552440 BAALC-AS2P0C853 105 aa2.56□□□□□ -2
USP44-208ENST00000552440 SLC25A6P12236 298 aa2.56□□□□□ -2
USP44-208ENST00000552440 DSCR4P56555 118 aaPredicted RBP2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms