RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 HIST1H2BCP62807 126 aa11.19□□□□□ -0.62
SSH1-208ENST00000548522 HIST2H2BEQ16778 126 aa11.19□□□□□ -0.62
SSH1-208ENST00000548522 COA6Q5JTJ3 125 aaKnown RBP11.19□□□□□ -0.62
SSH1-208ENST00000548522 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.19□□□□□ -0.62
SSH1-208ENST00000548522 PRR9Q5T870 116 aa11.19□□□□□ -0.62
SSH1-208ENST00000548522 CDPF1Q6NVV7 123 aa11.19□□□□□ -0.62
SSH1-208ENST00000548522 TMEM75Q8N9X5 138 aa11.19□□□□□ -0.62
SSH1-208ENST00000548522 HIST1H2BHQ93079 126 aa11.19□□□□□ -0.62
SSH1-208ENST00000548522 FAM19A4Q96LR4 140 aa11.19□□□□□ -0.62
SSH1-208ENST00000548522 HIST1H2BNQ99877 126 aa11.19□□□□□ -0.62
SSH1-208ENST00000548522 HIST1H2BMQ99879 126 aa11.19□□□□□ -0.62
SSH1-208ENST00000548522 MRPL16Q9NX20 251 aaKnown RBP11.19□□□□□ -0.62
SSH1-208ENST00000548522 ICOSQ9Y6W8 199 aa11.19□□□□□ -0.62
SSH1-208ENST00000548522 PAX4O43316 350 aa11.18□□□□□ -0.62
SSH1-208ENST00000548522 SNRPEP62304 92 aaKnown RBP11.18□□□□□ -0.62
SSH1-208ENST00000548522 IBA57Q5T440 356 aaKnown RBP11.18□□□□□ -0.62
SSH1-208ENST00000548522 RASL11AQ6T310 242 aa11.18□□□□□ -0.62
SSH1-208ENST00000548522 CMTM2Q8TAZ6 248 aa11.18□□□□□ -0.62
SSH1-208ENST00000548522 BLNKQ8WV28 456 aa11.18□□□□□ -0.62
SSH1-208ENST00000548522 MDFICQ9P1T7 246 aa11.18□□□□□ -0.62
SSH1-208ENST00000548522 ZFP30Q9Y2G7 519 aa11.18□□□□□ -0.62
SSH1-208ENST00000548522 SMIM27A0A1W2PRY6 76 aa11.17□□□□□ -0.62
SSH1-208ENST00000548522 EREGO14944 169 aa11.17□□□□□ -0.62
SSH1-208ENST00000548522 MT-ND6P03923 174 aa11.17□□□□□ -0.62
SSH1-208ENST00000548522 RNASE4P34096 147 aaKnown RBP11.17□□□□□ -0.62
SSH1-208ENST00000548522 TCL1AP56279 114 aa11.17□□□□□ -0.62
SSH1-208ENST00000548522 FRZBQ92765 325 aa11.17□□□□□ -0.62
SSH1-208ENST00000548522 C8orf49Q96NF6 230 aa11.17□□□□□ -0.62
SSH1-208ENST00000548522 LINC00467Q9BRT7 94 aa11.17□□□□□ -0.62
SSH1-208ENST00000548522 AGPAT4-IT1Q9H0P7 198 aa11.17□□□□□ -0.62
SSH1-208ENST00000548522 FAM231BA6NCW3 169 aa11.16□□□□□ -0.62
SSH1-208ENST00000548522 TRGC1P0CF51 173 aa11.16□□□□□ -0.62
SSH1-208ENST00000548522 FABP9Q0Z7S8 132 aa11.16□□□□□ -0.62
SSH1-208ENST00000548522 ANXA2RQ3ZCQ2 193 aa11.16□□□□□ -0.62
SSH1-208ENST00000548522 WDR73Q6P4I2 378 aa11.16□□□□□ -0.62
SSH1-208ENST00000548522 LYPD5Q6UWN5 251 aa11.16□□□□□ -0.62
SSH1-208ENST00000548522 COX8CQ7Z4L0 72 aa11.16□□□□□ -0.62
SSH1-208ENST00000548522 TMEM183AQ8IXX5 376 aa11.16□□□□□ -0.62
SSH1-208ENST00000548522 EXOC3-AS1Q8N2X6 119 aa11.16□□□□□ -0.62
SSH1-208ENST00000548522 AAMDCQ9H7C9 122 aa11.16□□□□□ -0.62
SSH1-208ENST00000548522 IGKV2-40A0A087WW87 121 aaPredicted RBP11.15□□□□□ -0.62
SSH1-208ENST00000548522 IGKV2D-40P01614 121 aaPredicted RBP11.15□□□□□ -0.62
SSH1-208ENST00000548522 CRYBA4P53673 196 aa11.15□□□□□ -0.62
SSH1-208ENST00000548522 Q86TA4 180 aa11.15□□□□□ -0.62
SSH1-208ENST00000548522 WFDC10BQ8IUB3 73 aa11.15□□□□□ -0.62
SSH1-208ENST00000548522 MRPL53Q96EL3 112 aaKnown RBP11.15□□□□□ -0.62
SSH1-208ENST00000548522 GNB1LQ9BYB4 327 aa11.15□□□□□ -0.62
SSH1-208ENST00000548522 GFRA4Q9GZZ7 299 aa11.15□□□□□ -0.62
SSH1-208ENST00000548522 GATCO43716 136 aaKnown RBP11.14□□□□□ -0.63
SSH1-208ENST00000548522 SMIM6P0DI80 62 aa11.14□□□□□ -0.63
SSH1-208ENST00000548522 MGST1P10620 155 aaKnown RBP11.14□□□□□ -0.63
SSH1-208ENST00000548522 CSN1S1P47710 185 aa11.14□□□□□ -0.63
SSH1-208ENST00000548522 GNG5P63218 68 aa11.14□□□□□ -0.63
SSH1-208ENST00000548522 FHL2Q14192 279 aa11.14□□□□□ -0.63
SSH1-208ENST00000548522 SMUG1Q53HV7 270 aa11.14□□□□□ -0.63
SSH1-208ENST00000548522 ATP5L2Q7Z4Y8 100 aa11.14□□□□□ -0.63
SSH1-208ENST00000548522 LINC00518Q8N0U6 118 aa11.14□□□□□ -0.63
SSH1-208ENST00000548522 ZFAND2AQ8N6M9 145 aa11.14□□□□□ -0.63
SSH1-208ENST00000548522 PRO0255Q9UI72 69 aa11.14□□□□□ -0.63
SSH1-208ENST00000548522 C19orf71A6NCJ1 209 aa11.13□□□□□ -0.63
SSH1-208ENST00000548522 IGLV2-11P01706 119 aa11.13□□□□□ -0.63
SSH1-208ENST00000548522 CRISP2P16562 243 aa11.13□□□□□ -0.63
SSH1-208ENST00000548522 NFE4Q86UQ8 179 aa11.13□□□□□ -0.63
SSH1-208ENST00000548522 LINC00479Q96M42 142 aa11.13□□□□□ -0.63
SSH1-208ENST00000548522 VGLL1Q99990 258 aa11.13□□□□□ -0.63
SSH1-208ENST00000548522 HHLA3Q9XRX5 114 aa11.13□□□□□ -0.63
SSH1-208ENST00000548522 DIRC3C9JPN6 131 aa11.12□□□□□ -0.63
SSH1-208ENST00000548522 GPX1P07203 203 aa11.12□□□□□ -0.63
SSH1-208ENST00000548522 Q8TAT8 98 aa11.12□□□□□ -0.63
SSH1-208ENST00000548522 TSKUQ8WUA8 353 aa11.12□□□□□ -0.63
SSH1-208ENST00000548522 LINC00477Q96M19 166 aa11.12□□□□□ -0.63
SSH1-208ENST00000548522 RNASE7Q9H1E1 156 aaKnown RBP11.12□□□□□ -0.63
SSH1-208ENST00000548522 MSRB1Q9NZV6 116 aa11.12□□□□□ -0.63
SSH1-208ENST00000548522 TRAPPC1Q9Y5R8 145 aa11.12□□□□□ -0.63
SSH1-208ENST00000548522 IGHV1OR15-1A0A075B7D0 117 aa11.11□□□□□ -0.63
SSH1-208ENST00000548522 TRAV34A0A0B4J273 112 aa11.11□□□□□ -0.63
SSH1-208ENST00000548522 RBAKDNA6NC62 111 aa11.11□□□□□ -0.63
SSH1-208ENST00000548522 A8MWL6 223 aa11.11□□□□□ -0.63
SSH1-208ENST00000548522 K7EQD1 137 aa11.11□□□□□ -0.63
SSH1-208ENST00000548522 GCSHP23434 173 aa11.11□□□□□ -0.63
SSH1-208ENST00000548522 MRPL23Q16540 153 aaKnown RBP11.11□□□□□ -0.63
SSH1-208ENST00000548522 C9orf47Q6ZRZ4 202 aa11.11□□□□□ -0.63
SSH1-208ENST00000548522 NEGR1Q7Z3B1 354 aa11.11□□□□□ -0.63
SSH1-208ENST00000548522 NUDT10Q8NFP7 164 aa11.11□□□□□ -0.63
SSH1-208ENST00000548522 NUDT11Q96G61 164 aa11.11□□□□□ -0.63
SSH1-208ENST00000548522 NAT8BQ9UHF3 227 aa11.11□□□□□ -0.63
SSH1-208ENST00000548522 HLA-DQA1P01909 254 aa11.1□□□□□ -0.63
SSH1-208ENST00000548522 AKR1D1P51857 326 aa11.1□□□□□ -0.63
SSH1-208ENST00000548522 NDUFA6P56556 154 aa11.1□□□□□ -0.63
SSH1-208ENST00000548522 GOLT1AQ6ZVE7 132 aa11.1□□□□□ -0.63
SSH1-208ENST00000548522 ZNF479Q96JC4 524 aa11.1□□□□□ -0.63
SSH1-208ENST00000548522 RPP21Q9H633 154 aaKnown RBP11.1□□□□□ -0.63
SSH1-208ENST00000548522 FOXA3P55318 350 aaPredicted RBP11.09□□□□□ -0.63
SSH1-208ENST00000548522 MUC21Q5SSG8 566 aa11.09□□□□□ -0.63
SSH1-208ENST00000548522 SAPCD1Q5SSQ6 148 aa11.09□□□□□ -0.63
SSH1-208ENST00000548522 DNLZQ5SXM8 178 aa11.09□□□□□ -0.63
SSH1-208ENST00000548522 HIST3H2BBQ8N257 126 aa11.09□□□□□ -0.63
SSH1-208ENST00000548522 PSG8Q9UQ74 426 aa11.09□□□□□ -0.63
SSH1-208ENST00000548522 P01737 135 aa11.08□□□□□ -0.64
SSH1-208ENST00000548522 GYPEP15421 78 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 123.6 ms