RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 M0R381 172 aa12.73□□□□□ -0.37
RBFOX1-207ENST00000547338 HNRNPA3P51991 378 aaKnown RBP12.73□□□□□ -0.37
RBFOX1-207ENST00000547338 Q6ZN92 141 aa12.73□□□□□ -0.37
RBFOX1-207ENST00000547338 PMCHL2Q9BQD1 86 aa12.73□□□□□ -0.37
RBFOX1-207ENST00000547338 DPH3P1Q9H4G8 78 aa12.73□□□□□ -0.37
RBFOX1-207ENST00000547338 PEMTQ9UBM1 199 aa12.73□□□□□ -0.37
RBFOX1-207ENST00000547338 PHLDA3Q9Y5J5 127 aa12.73□□□□□ -0.37
RBFOX1-207ENST00000547338 A0A096LNJ9 63 aa12.72□□□□□ -0.37
RBFOX1-207ENST00000547338 NXPH4O95158 308 aa12.72□□□□□ -0.37
RBFOX1-207ENST00000547338 EVI2AP22794 236 aa12.72□□□□□ -0.37
RBFOX1-207ENST00000547338 ANXA2RQ3ZCQ2 193 aa12.72□□□□□ -0.37
RBFOX1-207ENST00000547338 FAM159AQ6UWV7 190 aa12.72□□□□□ -0.37
RBFOX1-207ENST00000547338 LINC00173Q6ZV60 143 aa12.72□□□□□ -0.37
RBFOX1-207ENST00000547338 C20orf78Q9BR46 151 aa12.72□□□□□ -0.37
RBFOX1-207ENST00000547338 A0A0J9YX75 114 aa12.72□□□□□ -0.37
RBFOX1-207ENST00000547338 H3BVH4 76 aa12.72□□□□□ -0.37
RBFOX1-207ENST00000547338 POM121L12Q8N7R1 296 aa12.72□□□□□ -0.37
RBFOX1-207ENST00000547338 SMKR1H3BMG3 65 aa12.71□□□□□ -0.38
RBFOX1-207ENST00000547338 FOXI2Q6ZQN5 318 aa12.71□□□□□ -0.38
RBFOX1-207ENST00000547338 IFI27L1Q96BM0 104 aa12.71□□□□□ -0.38
RBFOX1-207ENST00000547338 C7orf71A4D174 169 aa12.7□□□□□ -0.38
RBFOX1-207ENST00000547338 LINC01549A6NIU2 74 aa12.7□□□□□ -0.38
RBFOX1-207ENST00000547338 NUTF2P61970 127 aaKnown RBP12.7□□□□□ -0.38
RBFOX1-207ENST00000547338 CD300EQ496F6 205 aaPredicted RBP12.7□□□□□ -0.38
RBFOX1-207ENST00000547338 ATOH7Q8N100 152 aa12.7□□□□□ -0.38
RBFOX1-207ENST00000547338 NRACQ8N912 160 aa12.7□□□□□ -0.38
RBFOX1-207ENST00000547338 IGLV2-18A0A075B6J9 118 aa12.69□□□□□ -0.38
RBFOX1-207ENST00000547338 F6UB75 175 aa12.69□□□□□ -0.38
RBFOX1-207ENST00000547338 EREGO14944 169 aa12.69□□□□□ -0.38
RBFOX1-207ENST00000547338 ATP5LO75964 103 aa12.69□□□□□ -0.38
RBFOX1-207ENST00000547338 NCR2O95944 276 aa12.69□□□□□ -0.38
RBFOX1-207ENST00000547338 G0S2P27469 103 aa12.69□□□□□ -0.38
RBFOX1-207ENST00000547338 DEFB114Q30KQ6 69 aa12.69□□□□□ -0.38
RBFOX1-207ENST00000547338 SBSPONQ8IVN8 264 aa12.69□□□□□ -0.38
RBFOX1-207ENST00000547338 AP1S3Q96PC3 154 aa12.69□□□□□ -0.38
RBFOX1-207ENST00000547338 SELENOKQ9Y6D0 94 aa12.69□□□□□ -0.38
RBFOX1-207ENST00000547338 IGKV3-7A0A075B6H7 116 aa12.68□□□□□ -0.38
RBFOX1-207ENST00000547338 RPL32P62910 135 aaKnown RBP12.68□□□□□ -0.38
RBFOX1-207ENST00000547338 LAGE3Q14657 143 aa12.68□□□□□ -0.38
RBFOX1-207ENST00000547338 COL5A1-AS1Q5SY13 56 aa12.68□□□□□ -0.38
RBFOX1-207ENST00000547338 SLC25A34Q6PIV7 304 aa12.68□□□□□ -0.38
RBFOX1-207ENST00000547338 WFDC3Q8IUB2 231 aa12.68□□□□□ -0.38
RBFOX1-207ENST00000547338 IGHV4-30-4P0DP06 118 aa12.67□□□□□ -0.38
RBFOX1-207ENST00000547338 RNASE3P12724 160 aaKnown RBP12.67□□□□□ -0.38
RBFOX1-207ENST00000547338 KIR3DS1Q14943 382 aa12.67□□□□□ -0.38
RBFOX1-207ENST00000547338 C19orf73Q9NVV2 129 aa12.67□□□□□ -0.38
RBFOX1-207ENST00000547338 GOLT1BQ9Y3E0 138 aa12.67□□□□□ -0.38
RBFOX1-207ENST00000547338 NBEAL2Q6ZNJ1 2754 aa12.67□□□□□ -0.38
RBFOX1-207ENST00000547338 A0A1B0GV90 55 aa12.67□□□□□ -0.38
RBFOX1-207ENST00000547338 CDKN1BP46527 198 aa12.67□□□□□ -0.38
RBFOX1-207ENST00000547338 ORMDL2Q53FV1 153 aa12.67□□□□□ -0.38
RBFOX1-207ENST00000547338 A8MTW9 85 aa12.66□□□□□ -0.38
RBFOX1-207ENST00000547338 A8MZ25 164 aa12.66□□□□□ -0.38
RBFOX1-207ENST00000547338 ZNF688P0C7X2 276 aa12.66□□□□□ -0.38
RBFOX1-207ENST00000547338 NHLRC4P0CG21 123 aaPredicted RBP12.66□□□□□ -0.38
RBFOX1-207ENST00000547338 MAJINQ3KP22 176 aa12.66□□□□□ -0.38
RBFOX1-207ENST00000547338 J3KRW8 73 aa12.65□□□□□ -0.38
RBFOX1-207ENST00000547338 SMIM17P0DL12 118 aa12.65□□□□□ -0.38
RBFOX1-207ENST00000547338 SYT8Q8NBV8 401 aa12.65□□□□□ -0.38
RBFOX1-207ENST00000547338 TIMM8BQ9Y5J9 83 aaPredicted RBP12.65□□□□□ -0.38
RBFOX1-207ENST00000547338 GNRH2O43555 120 aa12.64□□□□□ -0.39
RBFOX1-207ENST00000547338 Q6ZQT7 251 aa12.64□□□□□ -0.39
RBFOX1-207ENST00000547338 TMEM61Q8N0U2 210 aa12.64□□□□□ -0.39
RBFOX1-207ENST00000547338 SMIM2Q9BVW6 85 aa12.64□□□□□ -0.39
RBFOX1-207ENST00000547338 TRAV25A0A0B4J276 109 aa12.63□□□□□ -0.39
RBFOX1-207ENST00000547338 CD7P09564 240 aa12.63□□□□□ -0.39
RBFOX1-207ENST00000547338 SUMO2P61956 95 aaKnown RBP12.63□□□□□ -0.39
RBFOX1-207ENST00000547338 DYNLRB2Q8TF09 96 aa12.63□□□□□ -0.39
RBFOX1-207ENST00000547338 DNAH7Q8WXX0 4024 aa12.63□□□□□ -0.39
RBFOX1-207ENST00000547338 hDV102S1A0JD36 115 aa12.62□□□□□ -0.39
RBFOX1-207ENST00000547338 COX8AP10176 69 aa12.62□□□□□ -0.39
RBFOX1-207ENST00000547338 TFPI2P48307 235 aa12.62□□□□□ -0.39
RBFOX1-207ENST00000547338 DEFB1P60022 68 aa12.62□□□□□ -0.39
RBFOX1-207ENST00000547338 C9orf85Q96MD7 179 aa12.62□□□□□ -0.39
RBFOX1-207ENST00000547338 CLUHP3Q96NS8 147 aa12.62□□□□□ -0.39
RBFOX1-207ENST00000547338 WFDC10AQ9H1F0 79 aa12.62□□□□□ -0.39
RBFOX1-207ENST00000547338 ZMAT4Q9H898 229 aa12.62□□□□□ -0.39
RBFOX1-207ENST00000547338 TRGV11A0A075B6L2 103 aa12.62□□□□□ -0.39
RBFOX1-207ENST00000547338 IGHV1OR15-1A0A075B7D0 117 aa12.62□□□□□ -0.39
RBFOX1-207ENST00000547338 DLEU1O43261 78 aa12.62□□□□□ -0.39
RBFOX1-207ENST00000547338 GATA1P15976 413 aaPredicted RBP12.62□□□□□ -0.39
RBFOX1-207ENST00000547338 C14orf178Q8N769 122 aaPredicted RBP12.62□□□□□ -0.39
RBFOX1-207ENST00000547338 KIF25-AS1Q9Y6Z4 181 aa12.62□□□□□ -0.39
RBFOX1-207ENST00000547338 TRAV12-3A0A0B4J271 114 aa12.61□□□□□ -0.39
RBFOX1-207ENST00000547338 H0Y8G0 127 aa12.61□□□□□ -0.39
RBFOX1-207ENST00000547338 SIVA1O15304 175 aa12.61□□□□□ -0.39
RBFOX1-207ENST00000547338 GAS8-AS1O95177 125 aa12.61□□□□□ -0.39
RBFOX1-207ENST00000547338 RASL10AQ92737 203 aa12.61□□□□□ -0.39
RBFOX1-207ENST00000547338 TM2D3Q9BRN9 247 aa12.61□□□□□ -0.39
RBFOX1-207ENST00000547338 IGHV3-16A0A0C4DH30 117 aa12.6□□□□□ -0.39
RBFOX1-207ENST00000547338 PIK3CD-AS1Q5SR53 167 aa12.6□□□□□ -0.39
RBFOX1-207ENST00000547338 AMTNQ6UX39 209 aa12.6□□□□□ -0.39
RBFOX1-207ENST00000547338 LINC00469Q8N7U9 141 aa12.6□□□□□ -0.39
RBFOX1-207ENST00000547338 WWC2-AS2Q96NR7 200 aa12.6□□□□□ -0.39
RBFOX1-207ENST00000547338 PRSS1P07477 247 aa12.59□□□□□ -0.39
RBFOX1-207ENST00000547338 HLA-DRB4P13762 266 aa12.59□□□□□ -0.39
RBFOX1-207ENST00000547338 CMC4P56277 68 aaPredicted RBP12.59□□□□□ -0.39
RBFOX1-207ENST00000547338 GTSCR1Q86UQ5 136 aa12.59□□□□□ -0.39
RBFOX1-207ENST00000547338 PTH2Q96A98 100 aa12.59□□□□□ -0.39
RBFOX1-207ENST00000547338 HLA-DRB4X5D2U9 266 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms