RNA–Protein interactions for RNA: ENST00000543898.5

ABCB1-210, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 5 BASIC

Gene ABCB1, Length 4,524 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-210ENST00000543898 OVOL1O14753 267 aa6.58□□□□□ -1.36
ABCB1-210ENST00000543898 MRPS12O15235 138 aaKnown RBP6.58□□□□□ -1.36
ABCB1-210ENST00000543898 TCL1BO95988 128 aa6.58□□□□□ -1.36
ABCB1-210ENST00000543898 GRNP28799 593 aaKnown RBP6.58□□□□□ -1.36
ABCB1-210ENST00000543898 HERVK_113P63121 156 aa6.58□□□□□ -1.36
ABCB1-210ENST00000543898 TRPT1Q86TN4 253 aaKnown RBP6.58□□□□□ -1.36
ABCB1-210ENST00000543898 FAM110DQ8TAY7 271 aaPredicted RBP6.58□□□□□ -1.36
ABCB1-210ENST00000543898 SAA4P35542 130 aa6.57□□□□□ -1.36
ABCB1-210ENST00000543898 S100A7L2Q5SY68 101 aa6.57□□□□□ -1.36
ABCB1-210ENST00000543898 WFDC11Q8NEX6 87 aa6.57□□□□□ -1.36
ABCB1-210ENST00000543898 NPBQ8NG41 125 aa6.57□□□□□ -1.36
ABCB1-210ENST00000543898 CHCHD5Q9BSY4 110 aa6.57□□□□□ -1.36
ABCB1-210ENST00000543898 TRAV41A0A0B4J266 112 aa6.57□□□□□ -1.36
ABCB1-210ENST00000543898 M0R1W7 72 aa6.57□□□□□ -1.36
ABCB1-210ENST00000543898 ZNF876PQ49A33 203 aa6.57□□□□□ -1.36
ABCB1-210ENST00000543898 IGFL3Q6UXB1 125 aa6.57□□□□□ -1.36
ABCB1-210ENST00000543898 TRAV12-1A0A0B4J245 112 aa6.57□□□□□ -1.36
ABCB1-210ENST00000543898 FAM236DA0A1B0GTK5 79 aa6.57□□□□□ -1.36
ABCB1-210ENST00000543898 FAM236CP0DP71 79 aa6.57□□□□□ -1.36
ABCB1-210ENST00000543898 ATXN8Q156A1 80 aa6.57□□□□□ -1.36
ABCB1-210ENST00000543898 PHLDA1Q8WV24 401 aaPredicted RBP6.57□□□□□ -1.36
ABCB1-210ENST00000543898 TOMM6Q96B49 74 aa6.57□□□□□ -1.36
ABCB1-210ENST00000543898 FAM236AA0A1B0GUQ0 79 aa6.57□□□□□ -1.36
ABCB1-210ENST00000543898 FAM236BA0A1B0GV22 79 aa6.57□□□□□ -1.36
ABCB1-210ENST00000543898 KHDC1LQ5JSQ8 128 aa6.57□□□□□ -1.36
ABCB1-210ENST00000543898 ZMAT4Q9H898 229 aa6.57□□□□□ -1.36
ABCB1-210ENST00000543898 COL6A3P12111 3177 aa6.56□□□□□ -1.36
ABCB1-210ENST00000543898 TRBV7-3A0A075B6L6 115 aa6.56□□□□□ -1.36
ABCB1-210ENST00000543898 TRBV7-1A0A0A6YYK4 115 aa6.56□□□□□ -1.36
ABCB1-210ENST00000543898 BRD3OSQ6XYD6 125 aa6.56□□□□□ -1.36
ABCB1-210ENST00000543898 NDUFA11Q86Y39 141 aa6.56□□□□□ -1.36
ABCB1-210ENST00000543898 NRACQ8N912 160 aa6.56□□□□□ -1.36
ABCB1-210ENST00000543898 JPT2Q9H910 190 aa6.56□□□□□ -1.36
ABCB1-210ENST00000543898 WNK1Q9H4A3 2382 aa6.56□□□□□ -1.36
ABCB1-210ENST00000543898 PTPRQQ9UMZ3 2332 aa6.56□□□□□ -1.36
ABCB1-210ENST00000543898 RBAKDNA6NC62 111 aa6.56□□□□□ -1.36
ABCB1-210ENST00000543898 CD28P10747 220 aa6.56□□□□□ -1.36
ABCB1-210ENST00000543898 TMEM101Q96IK0 257 aa6.56□□□□□ -1.36
ABCB1-210ENST00000543898 RS1O15537 224 aa6.56□□□□□ -1.36
ABCB1-210ENST00000543898 CFC1BP0CG36 223 aa6.56□□□□□ -1.36
ABCB1-210ENST00000543898 CFC1P0CG37 223 aa6.56□□□□□ -1.36
ABCB1-210ENST00000543898 CFAP126Q5VTH2 177 aa6.56□□□□□ -1.36
ABCB1-210ENST00000543898 PIFOQ8TCI5 191 aa6.56□□□□□ -1.36
ABCB1-210ENST00000543898 RASL10AQ92737 203 aa6.56□□□□□ -1.36
ABCB1-210ENST00000543898 MGAQ8IWI9 3026 aa6.56□□□□□ -1.36
ABCB1-210ENST00000543898 TRAV8-3A0A0A6YYJ7 113 aa6.55□□□□□ -1.36
ABCB1-210ENST00000543898 MINOS1Q5TGZ0 78 aa6.55□□□□□ -1.36
ABCB1-210ENST00000543898 OPRPNQ99935 248 aaPredicted RBP6.55□□□□□ -1.36
ABCB1-210ENST00000543898 MINOS1-NBL1R4GNA1 71 aa6.55□□□□□ -1.36
ABCB1-210ENST00000543898 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.55□□□□□ -1.36
ABCB1-210ENST00000543898 LINC01548A6NM66 108 aa6.55□□□□□ -1.36
ABCB1-210ENST00000543898 RNASE13Q5GAN3 156 aaKnown RBP6.55□□□□□ -1.36
ABCB1-210ENST00000543898 NEXN-AS1Q8NBZ9 246 aa6.55□□□□□ -1.36
ABCB1-210ENST00000543898 RHPN1-AS1Q9BWJ2 59 aa6.55□□□□□ -1.36
ABCB1-210ENST00000543898 ANKRD11Q6UB99 2663 aaPredicted RBP6.55□□□□□ -1.36
ABCB1-210ENST00000543898 TRAV12-2A0A075B6T6 113 aa6.55□□□□□ -1.36
ABCB1-210ENST00000543898 OOSP1A8MZH6 123 aa6.55□□□□□ -1.36
ABCB1-210ENST00000543898 M0R2P5 195 aa6.55□□□□□ -1.36
ABCB1-210ENST00000543898 MORN3Q6PF18 240 aaPredicted RBP6.55□□□□□ -1.36
ABCB1-210ENST00000543898 MUSTN1Q8IVN3 82 aa6.54□□□□□ -1.36
ABCB1-210ENST00000543898 Q8N9W7 124 aa6.54□□□□□ -1.36
ABCB1-210ENST00000543898 BOD1L1Q8NFC6 3051 aa6.54□□□□□ -1.36
ABCB1-210ENST00000543898 OVOL3O00110 214 aa6.54□□□□□ -1.36
ABCB1-210ENST00000543898 NFE4Q86UQ8 179 aa6.54□□□□□ -1.36
ABCB1-210ENST00000543898 IGF2RP11717 2491 aa6.53□□□□□ -1.36
ABCB1-210ENST00000543898 H3BMM0 161 aa6.53□□□□□ -1.36
ABCB1-210ENST00000543898 LY6LH3BQJ8 138 aa6.53□□□□□ -1.36
ABCB1-210ENST00000543898 ATP6V0E2Q8NHE4 81 aa6.53□□□□□ -1.36
ABCB1-210ENST00000543898 UBE2WQ96B02 151 aa6.53□□□□□ -1.36
ABCB1-210ENST00000543898 ZNF625Q96I27 306 aaPredicted RBP6.53□□□□□ -1.36
ABCB1-210ENST00000543898 KLK9Q9UKQ9 250 aa6.53□□□□□ -1.36
ABCB1-210ENST00000543898 IGHV7-4-1A0A0J9YVY3 117 aa6.53□□□□□ -1.36
ABCB1-210ENST00000543898 TMEM141Q96I45 108 aa6.53□□□□□ -1.36
ABCB1-210ENST00000543898 TIMM21Q9BVV7 248 aa6.53□□□□□ -1.36
ABCB1-210ENST00000543898 U3KQE9 123 aa6.53□□□□□ -1.36
ABCB1-210ENST00000543898 PTPN13Q12923 2485 aa6.53□□□□□ -1.36
ABCB1-210ENST00000543898 TNFRSF13BO14836 293 aaPredicted RBP6.53□□□□□ -1.36
ABCB1-210ENST00000543898 C9orf47Q6ZRZ4 202 aa6.53□□□□□ -1.36
ABCB1-210ENST00000543898 Q6ZS46 218 aa6.53□□□□□ -1.36
ABCB1-210ENST00000543898 LRRC75A-AS1Q8N1F1 130 aa6.53□□□□□ -1.36
ABCB1-210ENST00000543898 A0A0J9YXV3 536 aa6.53□□□□□ -1.36
ABCB1-210ENST00000543898 A0A0J9YY99 117 aa6.53□□□□□ -1.36
ABCB1-210ENST00000543898 KNCNA6PVL3 124 aa6.53□□□□□ -1.36
ABCB1-210ENST00000543898 SNRPD3P62318 126 aaKnown RBP6.53□□□□□ -1.36
ABCB1-210ENST00000543898 CIRBPQ14011 172 aaKnown RBP6.53□□□□□ -1.36
ABCB1-210ENST00000543898 MRPL55Q7Z7F7 128 aaKnown RBP6.53□□□□□ -1.36
ABCB1-210ENST00000543898 CNFNQ9BYD5 112 aa6.53□□□□□ -1.36
ABCB1-210ENST00000543898 KLK5Q9Y337 293 aaPredicted RBP6.53□□□□□ -1.36
ABCB1-210ENST00000543898 F8W735 103 aaPredicted RBP6.52□□□□□ -1.37
ABCB1-210ENST00000543898 PRR9Q5T870 116 aa6.52□□□□□ -1.37
ABCB1-210ENST00000543898 SUMO4Q6EEV6 95 aa6.52□□□□□ -1.37
ABCB1-210ENST00000543898 NDUFC2O95298 119 aa6.52□□□□□ -1.37
ABCB1-210ENST00000543898 IGHG4P01861 327 aa6.52□□□□□ -1.37
ABCB1-210ENST00000543898 CUL9Q8IWT3 2517 aa6.52□□□□□ -1.37
ABCB1-210ENST00000543898 IGHV3OR16-12A0A075B7B8 117 aa6.52□□□□□ -1.37
ABCB1-210ENST00000543898 CCDC140Q96MF4 163 aa6.52□□□□□ -1.37
ABCB1-210ENST00000543898 IGLV2-18A0A075B6J9 118 aa6.51□□□□□ -1.37
ABCB1-210ENST00000543898 TRAV13-1A0A0B4J241 112 aa6.51□□□□□ -1.37
ABCB1-210ENST00000543898 NDUFA7O95182 113 aa6.51□□□□□ -1.37
ABCB1-210ENST00000543898 TRAV4A0A0B4J268 109 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms