RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 IGHV4-30-2A0A087WSY4 118 aa4.07□□□□□ -1.76
PROM1-220ENST00000540805 H3BRN7 92 aa4.07□□□□□ -1.76
PROM1-220ENST00000540805 SH2D1AO60880 128 aa4.07□□□□□ -1.76
PROM1-220ENST00000540805 IGHV4-59P01825 116 aa4.07□□□□□ -1.76
PROM1-220ENST00000540805 DEFB136Q30KP8 78 aa4.07□□□□□ -1.76
PROM1-220ENST00000540805 Q6ZQT7 251 aa4.07□□□□□ -1.76
PROM1-220ENST00000540805 LINC00311Q8N616 119 aa4.07□□□□□ -1.76
PROM1-220ENST00000540805 MAPKAPK5-AS1Q8N8E1 139 aa4.07□□□□□ -1.76
PROM1-220ENST00000540805 SHANK2-AS3Q9BTD1 123 aa4.07□□□□□ -1.76
PROM1-220ENST00000540805 IGHV1-69DA0A0B4J2H0 117 aa4.06□□□□□ -1.76
PROM1-220ENST00000540805 IGHV1-69P01742 117 aa4.06□□□□□ -1.76
PROM1-220ENST00000540805 MRGPRG-AS1Q2M3A8 158 aa4.06□□□□□ -1.76
PROM1-220ENST00000540805 MINOS1Q5TGZ0 78 aa4.06□□□□□ -1.76
PROM1-220ENST00000540805 OR11H1Q8NG94 326 aa4.06□□□□□ -1.76
PROM1-220ENST00000540805 CARD19Q96LW7 228 aa4.06□□□□□ -1.76
PROM1-220ENST00000540805 LINC00477Q96M19 166 aa4.06□□□□□ -1.76
PROM1-220ENST00000540805 ZMAT4Q9H898 229 aa4.06□□□□□ -1.76
PROM1-220ENST00000540805 PRO0461Q9UI25 63 aa4.06□□□□□ -1.76
PROM1-220ENST00000540805 MINOS1-NBL1R4GNA1 71 aa4.06□□□□□ -1.76
PROM1-220ENST00000540805 LOC107984640A0A0U1RRK4 108 aa4.06□□□□□ -1.76
PROM1-220ENST00000540805 ATP5LO75964 103 aa4.06□□□□□ -1.76
PROM1-220ENST00000540805 DPM2O94777 84 aa4.06□□□□□ -1.76
PROM1-220ENST00000540805 HLA-DRB4P13762 266 aa4.06□□□□□ -1.76
PROM1-220ENST00000540805 EVI2AP22794 236 aa4.06□□□□□ -1.76
PROM1-220ENST00000540805 LEPP41159 167 aa4.06□□□□□ -1.76
PROM1-220ENST00000540805 GAGE5Q13069 117 aa4.06□□□□□ -1.76
PROM1-220ENST00000540805 GAGE6Q13070 117 aa4.06□□□□□ -1.76
PROM1-220ENST00000540805 LINC01559Q495D7 138 aa4.06□□□□□ -1.76
PROM1-220ENST00000540805 GAGE13Q4V321 117 aa4.06□□□□□ -1.76
PROM1-220ENST00000540805 ZC2HC1BQ5TFG8 222 aa4.06□□□□□ -1.76
PROM1-220ENST00000540805 ZNF562Q6V9R5 426 aa4.06□□□□□ -1.76
PROM1-220ENST00000540805 TMEM101Q96IK0 257 aa4.06□□□□□ -1.76
PROM1-220ENST00000540805 RITA1Q96K30 269 aa4.06□□□□□ -1.76
PROM1-220ENST00000540805 HLA-DRB4X5D2U9 266 aa4.06□□□□□ -1.76
PROM1-220ENST00000540805 IGHV3-64A0A075B6Q5 118 aa4.06□□□□□ -1.76
PROM1-220ENST00000540805 H7C1H1 209 aa4.06□□□□□ -1.76
PROM1-220ENST00000540805 FOXI1Q12951 378 aa4.06□□□□□ -1.76
PROM1-220ENST00000540805 TAL2Q16559 108 aa4.06□□□□□ -1.76
PROM1-220ENST00000540805 C8orf31Q8N9H6 132 aa4.06□□□□□ -1.76
PROM1-220ENST00000540805 BBC3Q96PG8 261 aaPredicted RBP4.06□□□□□ -1.76
PROM1-220ENST00000540805 PSCAO43653 123 aa4.05□□□□□ -1.76
PROM1-220ENST00000540805 PLA2G2AP14555 144 aa4.05□□□□□ -1.76
PROM1-220ENST00000540805 LOXP28300 417 aaPredicted RBP4.05□□□□□ -1.76
PROM1-220ENST00000540805 DEFB112Q30KQ8 113 aa4.05□□□□□ -1.76
PROM1-220ENST00000540805 TTC9CQ8N5M4 171 aa4.05□□□□□ -1.76
PROM1-220ENST00000540805 NXT2Q9NPJ8 142 aaKnown RBP4.05□□□□□ -1.76
PROM1-220ENST00000540805 CTSZQ9UBR2 303 aa4.05□□□□□ -1.76
PROM1-220ENST00000540805 HHLA3Q9XRX5 114 aa4.05□□□□□ -1.76
PROM1-220ENST00000540805 TRAV4A0A0B4J268 109 aa4.05□□□□□ -1.76
PROM1-220ENST00000540805 DUSP14O95147 198 aaKnown RBP4.05□□□□□ -1.76
PROM1-220ENST00000540805 LGALS3P17931 250 aaKnown RBP4.05□□□□□ -1.76
PROM1-220ENST00000540805 MALP21145 153 aa4.05□□□□□ -1.76
PROM1-220ENST00000540805 C12orf74Q32Q52 190 aa4.05□□□□□ -1.76
PROM1-220ENST00000540805 TMEM155Q4W5P6 130 aa4.05□□□□□ -1.76
PROM1-220ENST00000540805 SCGB3A1Q96QR1 104 aa4.05□□□□□ -1.76
PROM1-220ENST00000540805 FBN2P35556 2912 aa4.05□□□□□ -1.76
PROM1-220ENST00000540805 TEX22C9J3V5 150 aa4.05□□□□□ -1.76
PROM1-220ENST00000540805 F5H768 121 aa4.05□□□□□ -1.76
PROM1-220ENST00000540805 I3L2K1 104 aa4.05□□□□□ -1.76
PROM1-220ENST00000540805 M0R1W7 72 aa4.05□□□□□ -1.76
PROM1-220ENST00000540805 IGKV1-17P01599 117 aa4.05□□□□□ -1.76
PROM1-220ENST00000540805 UBE2E1P51965 193 aa4.05□□□□□ -1.76
PROM1-220ENST00000540805 BLCAPP62952 87 aa4.05□□□□□ -1.76
PROM1-220ENST00000540805 SPINK13Q1W4C9 94 aa4.05□□□□□ -1.76
PROM1-220ENST00000540805 OR11H2Q8NH07 326 aa4.05□□□□□ -1.76
PROM1-220ENST00000540805 HIST1H4GQ99525 98 aa4.05□□□□□ -1.76
PROM1-220ENST00000540805 FAM110AQ9BQ89 295 aa4.05□□□□□ -1.76
PROM1-220ENST00000540805 STAB1Q9NY15 2570 aa4.05□□□□□ -1.76
PROM1-220ENST00000540805 NOTCH1P46531 2555 aa4.05□□□□□ -1.76
PROM1-220ENST00000540805 A0A096LPF7 62 aa4.04□□□□□ -1.76
PROM1-220ENST00000540805 TRAV21A0A0B4J279 112 aa4.04□□□□□ -1.76
PROM1-220ENST00000540805 IGHV3-16A0A0C4DH30 117 aa4.04□□□□□ -1.76
PROM1-220ENST00000540805 LINC01546A6NGU7 62 aa4.04□□□□□ -1.76
PROM1-220ENST00000540805 CRPP02741 224 aa4.04□□□□□ -1.76
PROM1-220ENST00000540805 PDE6HQ13956 83 aa4.04□□□□□ -1.76
PROM1-220ENST00000540805 ZNF876PQ49A33 203 aa4.04□□□□□ -1.76
PROM1-220ENST00000540805 TMEM158Q8WZ71 300 aa4.04□□□□□ -1.76
PROM1-220ENST00000540805 AKAP9Q99996 3911 aa4.04□□□□□ -1.76
PROM1-220ENST00000540805 TNFRSF6BO95407 300 aa4.04□□□□□ -1.76
PROM1-220ENST00000540805 CRYGBP07316 175 aa4.04□□□□□ -1.76
PROM1-220ENST00000540805 CIRBPQ14011 172 aaKnown RBP4.04□□□□□ -1.76
PROM1-220ENST00000540805 RNF185Q96GF1 192 aa4.04□□□□□ -1.76
PROM1-220ENST00000540805 SLC50A1Q9BRV3 221 aa4.04□□□□□ -1.76
PROM1-220ENST00000540805 HELZ2Q9BYK8 2649 aaKnown RBP4.04□□□□□ -1.76
PROM1-220ENST00000540805 ANKRD17O75179 2603 aaKnown RBP4.04□□□□□ -1.76
PROM1-220ENST00000540805 A0A087WWL8 130 aa4.04□□□□□ -1.76
PROM1-220ENST00000540805 MRPS12O15235 138 aaKnown RBP4.04□□□□□ -1.76
PROM1-220ENST00000540805 IGLC6P0CF74 106 aa4.04□□□□□ -1.76
PROM1-220ENST00000540805 EGR2P11161 476 aaPredicted RBP4.04□□□□□ -1.76
PROM1-220ENST00000540805 SRSF2Q01130 221 aaKnown RBP4.04□□□□□ -1.76
PROM1-220ENST00000540805 DEFB113Q30KQ7 82 aa4.04□□□□□ -1.76
PROM1-220ENST00000540805 RNF182Q8N6D2 247 aa4.04□□□□□ -1.76
PROM1-220ENST00000540805 ZNF491Q8N8L2 437 aa4.04□□□□□ -1.76
PROM1-220ENST00000540805 OOSP1A8MZH6 123 aa4.03□□□□□ -1.76
PROM1-220ENST00000540805 ZFP36P26651 326 aaKnown RBP4.03□□□□□ -1.76
PROM1-220ENST00000540805 ADORA2A-AS1P86434 159 aa4.03□□□□□ -1.76
PROM1-220ENST00000540805 CDSNQ15517 529 aa4.03□□□□□ -1.76
PROM1-220ENST00000540805 PRR25Q96S07 402 aa4.03□□□□□ -1.76
PROM1-220ENST00000540805 VCX2Q9H322 139 aa4.03□□□□□ -1.76
PROM1-220ENST00000540805 VPREB3Q9UKI3 123 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms