RNA–Protein interactions for RNA: ENST00000529611.5

CCDC90B-213, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2 BASIC

Gene CCDC90B, Length 1,986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-213ENST00000529611 ZNF747Q9BV97 191 aa11.29□□□□□ -0.6
CCDC90B-213ENST00000529611 C19orf73Q9NVV2 129 aa11.29□□□□□ -0.6
CCDC90B-213ENST00000529611 A0A087WWL8 130 aa11.28□□□□□ -0.6
CCDC90B-213ENST00000529611 RPL39LQ96EH5 51 aaKnown RBP11.28□□□□□ -0.6
CCDC90B-213ENST00000529611 XCL2Q9UBD3 114 aa11.28□□□□□ -0.6
CCDC90B-213ENST00000529611 VWFP04275 2813 aa11.28□□□□□ -0.6
CCDC90B-213ENST00000529611 KIR2DL5BA0A0G2JN68 375 aa11.28□□□□□ -0.6
CCDC90B-213ENST00000529611 KIR2DL5BA0A0G2JPC4 375 aa11.28□□□□□ -0.6
CCDC90B-213ENST00000529611 KIR2DL5AQ8N109 375 aa11.28□□□□□ -0.6
CCDC90B-213ENST00000529611 LINC00467Q9BRT7 94 aa11.28□□□□□ -0.6
CCDC90B-213ENST00000529611 VAMP8Q9BV40 100 aa11.28□□□□□ -0.6
CCDC90B-213ENST00000529611 MAP1LC3CQ9BXW4 147 aa11.28□□□□□ -0.6
CCDC90B-213ENST00000529611 WFDC10AQ9H1F0 79 aa11.28□□□□□ -0.6
CCDC90B-213ENST00000529611 ZNF876PQ49A33 203 aa11.27□□□□□ -0.61
CCDC90B-213ENST00000529611 LINC01587Q99440 93 aa11.27□□□□□ -0.61
CCDC90B-213ENST00000529611 CITED1Q99966 193 aa11.27□□□□□ -0.61
CCDC90B-213ENST00000529611 BAHCC1Q9P281 2608 aa11.27□□□□□ -0.61
CCDC90B-213ENST00000529611 SMIM2Q9BVW6 85 aa11.27□□□□□ -0.61
CCDC90B-213ENST00000529611 PAM16Q9Y3D7 125 aa11.27□□□□□ -0.61
CCDC90B-213ENST00000529611 NOTCH3Q9UM47 2321 aa11.27□□□□□ -0.61
CCDC90B-213ENST00000529611 TEP1Q99973 2627 aaKnown RBP11.26□□□□□ -0.61
CCDC90B-213ENST00000529611 CRYGDP07320 174 aa11.26□□□□□ -0.61
CCDC90B-213ENST00000529611 SUMO2P61956 95 aaKnown RBP11.26□□□□□ -0.61
CCDC90B-213ENST00000529611 SUMO4Q6EEV6 95 aa11.26□□□□□ -0.61
CCDC90B-213ENST00000529611 ATOH7Q8N100 152 aa11.26□□□□□ -0.61
CCDC90B-213ENST00000529611 SPATA3Q8NHX4 192 aa11.26□□□□□ -0.61
CCDC90B-213ENST00000529611 C20orf78Q9BR46 151 aa11.26□□□□□ -0.61
CCDC90B-213ENST00000529611 FCER1GP30273 86 aa11.25□□□□□ -0.61
CCDC90B-213ENST00000529611 NUTF2P61970 127 aaKnown RBP11.25□□□□□ -0.61
CCDC90B-213ENST00000529611 FAM74A4Q5TZK3 123 aa11.25□□□□□ -0.61
CCDC90B-213ENST00000529611 PET117Q6UWS5 81 aa11.25□□□□□ -0.61
CCDC90B-213ENST00000529611 C1orf158Q8N1D5 194 aa11.25□□□□□ -0.61
CCDC90B-213ENST00000529611 DDTP30046 118 aa11.25□□□□□ -0.61
CCDC90B-213ENST00000529611 ZNF415Q09FC8 603 aa11.25□□□□□ -0.61
CCDC90B-213ENST00000529611 C11orf72Q8NBR9 251 aa11.25□□□□□ -0.61
CCDC90B-213ENST00000529611 TCAPO15273 167 aa11.24□□□□□ -0.61
CCDC90B-213ENST00000529611 PPP1R17O96001 155 aa11.24□□□□□ -0.61
CCDC90B-213ENST00000529611 F5H697 171 aa11.23□□□□□ -0.61
CCDC90B-213ENST00000529611 H0Y8G0 127 aa11.23□□□□□ -0.61
CCDC90B-213ENST00000529611 GIG44P09565 113 aaPredicted RBP11.23□□□□□ -0.61
CCDC90B-213ENST00000529611 LAGE3Q14657 143 aa11.23□□□□□ -0.61
CCDC90B-213ENST00000529611 TMEM158Q8WZ71 300 aa11.23□□□□□ -0.61
CCDC90B-213ENST00000529611 MCRIP2Q9BUT9 160 aaKnown RBP11.23□□□□□ -0.61
CCDC90B-213ENST00000529611 C20orf202A1L168 122 aa11.23□□□□□ -0.61
CCDC90B-213ENST00000529611 M0R2P5 195 aa11.23□□□□□ -0.61
CCDC90B-213ENST00000529611 LINC01545Q5VT33 79 aa11.23□□□□□ -0.61
CCDC90B-213ENST00000529611 TMEM208Q9BTX3 173 aa11.23□□□□□ -0.61
CCDC90B-213ENST00000529611 MAJINQ3KP22 176 aa11.22□□□□□ -0.61
CCDC90B-213ENST00000529611 IFI27L1Q96BM0 104 aa11.22□□□□□ -0.61
CCDC90B-213ENST00000529611 IGHV3OR16-12A0A075B7B8 117 aa11.21□□□□□ -0.61
CCDC90B-213ENST00000529611 AZU1P20160 251 aa11.21□□□□□ -0.61
CCDC90B-213ENST00000529611 INSL3P51460 131 aa11.21□□□□□ -0.61
CCDC90B-213ENST00000529611 ZNF56Q15929 161 aa11.21□□□□□ -0.61
CCDC90B-213ENST00000529611 SPATA45Q537H7 98 aa11.21□□□□□ -0.61
CCDC90B-213ENST00000529611 PTH2Q96A98 100 aa11.21□□□□□ -0.61
CCDC90B-213ENST00000529611 RPL35AP18077 110 aaKnown RBP11.21□□□□□ -0.62
CCDC90B-213ENST00000529611 PIK3CD-AS1Q5SR53 167 aa11.21□□□□□ -0.62
CCDC90B-213ENST00000529611 CSTL1Q9H114 145 aa11.21□□□□□ -0.62
CCDC90B-213ENST00000529611 TRAV9-2A0A087WT02 112 aa11.2□□□□□ -0.62
CCDC90B-213ENST00000529611 M0QY20 66 aa11.2□□□□□ -0.62
CCDC90B-213ENST00000529611 RPL32P62910 135 aaKnown RBP11.2□□□□□ -0.62
CCDC90B-213ENST00000529611 C9orf66Q5T8R8 295 aa11.2□□□□□ -0.62
CCDC90B-213ENST00000529611 C18orf15Q96N68 181 aa11.2□□□□□ -0.62
CCDC90B-213ENST00000529611 PMCHL2Q9BQD1 86 aa11.2□□□□□ -0.62
CCDC90B-213ENST00000529611 SPXQ9BT56 116 aa11.2□□□□□ -0.62
CCDC90B-213ENST00000529611 ST20Q9HBF5 79 aa11.2□□□□□ -0.62
CCDC90B-213ENST00000529611 TRRAPQ9Y4A5 3859 aa11.2□□□□□ -0.62
CCDC90B-213ENST00000529611 CYSRT1A8MQ03 144 aa11.19□□□□□ -0.62
CCDC90B-213ENST00000529611 POLR2KP53803 58 aaKnown RBP11.19□□□□□ -0.62
CCDC90B-213ENST00000529611 MORN3Q6PF18 240 aaPredicted RBP11.19□□□□□ -0.62
CCDC90B-213ENST00000529611 ZNF705AQ6ZN79 300 aaPredicted RBP11.19□□□□□ -0.62
CCDC90B-213ENST00000529611 K7EMI3 77 aa11.19□□□□□ -0.62
CCDC90B-213ENST00000529611 ORMDL2Q53FV1 153 aa11.19□□□□□ -0.62
CCDC90B-213ENST00000529611 NACAE9PAV3 2078 aa11.19□□□□□ -0.62
CCDC90B-213ENST00000529611 TRBV6-5A0A0K0K1A5 114 aa11.18□□□□□ -0.62
CCDC90B-213ENST00000529611 A8MWV9 139 aa11.18□□□□□ -0.62
CCDC90B-213ENST00000529611 NUDT3O95989 172 aa11.18□□□□□ -0.62
CCDC90B-213ENST00000529611 UFSP1Q6NVU6 142 aa11.18□□□□□ -0.62
CCDC90B-213ENST00000529611 NEGR1Q7Z3B1 354 aa11.18□□□□□ -0.62
CCDC90B-213ENST00000529611 IL17DQ8TAD2 202 aa11.18□□□□□ -0.62
CCDC90B-213ENST00000529611 RNASE8Q8TDE3 154 aaKnown RBP11.18□□□□□ -0.62
CCDC90B-213ENST00000529611 LGALS9BQ3B8N2 356 aa11.17□□□□□ -0.62
CCDC90B-213ENST00000529611 LGALS9CQ6DKI2 356 aa11.17□□□□□ -0.62
CCDC90B-213ENST00000529611 NDUFAF3Q9BU61 184 aa11.17□□□□□ -0.62
CCDC90B-213ENST00000529611 MRPL16Q9NX20 251 aaKnown RBP11.17□□□□□ -0.62
CCDC90B-213ENST00000529611 SDHAF1A6NFY7 115 aa11.17□□□□□ -0.62
CCDC90B-213ENST00000529611 IGLL1P15814 213 aa11.17□□□□□ -0.62
CCDC90B-213ENST00000529611 CSNK1G2-AS1Q8NCQ2 148 aa11.17□□□□□ -0.62
CCDC90B-213ENST00000529611 IGHV3-73A0A0B4J1V6 119 aa11.16□□□□□ -0.62
CCDC90B-213ENST00000529611 DEFA6Q01524 100 aa11.16□□□□□ -0.62
CCDC90B-213ENST00000529611 CFAP126Q5VTH2 177 aa11.16□□□□□ -0.62
CCDC90B-213ENST00000529611 GTSCR1Q86UQ5 136 aa11.16□□□□□ -0.62
CCDC90B-213ENST00000529611 TMEM263Q8WUH6 116 aaKnown RBP11.16□□□□□ -0.62
CCDC90B-213ENST00000529611 MIEN1Q9BRT3 115 aa11.16□□□□□ -0.62
CCDC90B-213ENST00000529611 C1QTNF4Q9BXJ3 329 aa11.16□□□□□ -0.62
CCDC90B-213ENST00000529611 EDA2RQ9HAV5 297 aa11.16□□□□□ -0.62
CCDC90B-213ENST00000529611 GOLT1BQ9Y3E0 138 aa11.16□□□□□ -0.62
CCDC90B-213ENST00000529611 TRBV27A0A0K0K1C4 114 aa11.16□□□□□ -0.62
CCDC90B-213ENST00000529611 hDV102S1A0JD36 115 aa11.16□□□□□ -0.62
CCDC90B-213ENST00000529611 C14orf144Q96I85 54 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms