RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 TRAV8-3A0A0A6YYJ7 113 aa3.7□□□□□ -1.82
PABPC1-223ENST00000523636 TEX48A0A1B0GUV7 120 aa3.7□□□□□ -1.82
PABPC1-223ENST00000523636 PGPA6NDG6 321 aa3.7□□□□□ -1.82
PABPC1-223ENST00000523636 CEBPZOSA8MTT3 80 aa3.7□□□□□ -1.82
PABPC1-223ENST00000523636 C16orf90A8MZG2 172 aa3.7□□□□□ -1.82
PABPC1-223ENST00000523636 H7BYZ3 331 aa3.7□□□□□ -1.82
PABPC1-223ENST00000523636 K7EQD1 137 aa3.7□□□□□ -1.82
PABPC1-223ENST00000523636 UPK2O00526 184 aa3.7□□□□□ -1.82
PABPC1-223ENST00000523636 OVOL1O14753 267 aa3.7□□□□□ -1.82
PABPC1-223ENST00000523636 NPFFO15130 113 aa3.7□□□□□ -1.82
PABPC1-223ENST00000523636 HIST1H2BKO60814 126 aa3.7□□□□□ -1.82
PABPC1-223ENST00000523636 ZNF737O75373 536 aa3.7□□□□□ -1.82
PABPC1-223ENST00000523636 NXPH4O95158 308 aa3.7□□□□□ -1.82
PABPC1-223ENST00000523636 TRBV12-3P01733 135 aa3.7□□□□□ -1.82
PABPC1-223ENST00000523636 HIST1H2BJP06899 126 aa3.7□□□□□ -1.82
PABPC1-223ENST00000523636 IGLC1P0CG04 106 aa3.7□□□□□ -1.82
PABPC1-223ENST00000523636 BCL2P10415 239 aa3.7□□□□□ -1.82
PABPC1-223ENST00000523636 FABP4P15090 132 aa3.7□□□□□ -1.82
PABPC1-223ENST00000523636 HIST1H2BOP23527 126 aa3.7□□□□□ -1.82
PABPC1-223ENST00000523636 HIST1H2BBP33778 126 aa3.7□□□□□ -1.82
PABPC1-223ENST00000523636 PPP1CCP36873 323 aaKnown RBP3.7□□□□□ -1.82
PABPC1-223ENST00000523636 MPV17P39210 176 aa3.7□□□□□ -1.82
PABPC1-223ENST00000523636 HIST1H2BDP58876 126 aa3.7□□□□□ -1.82
PABPC1-223ENST00000523636 ERVK-16P61578 105 aa3.7□□□□□ -1.82
PABPC1-223ENST00000523636 HIST1H2BCP62807 126 aa3.7□□□□□ -1.82
PABPC1-223ENST00000523636 CCL20P78556 96 aa3.7□□□□□ -1.82
PABPC1-223ENST00000523636 MEF2BQ02080 365 aaPredicted RBP3.7□□□□□ -1.82
PABPC1-223ENST00000523636 MMDQ15546 238 aa3.7□□□□□ -1.82
PABPC1-223ENST00000523636 HIST2H2BEQ16778 126 aa3.7□□□□□ -1.82
PABPC1-223ENST00000523636 TMEM183BQ1AE95 376 aa3.7□□□□□ -1.82
PABPC1-223ENST00000523636 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.7□□□□□ -1.82
PABPC1-223ENST00000523636 ACP7Q6ZNF0 438 aa3.7□□□□□ -1.82
PABPC1-223ENST00000523636 FAM19A3Q7Z5A8 133 aa3.7□□□□□ -1.82
PABPC1-223ENST00000523636 DRAM1Q8N682 238 aa3.7□□□□□ -1.82
PABPC1-223ENST00000523636 NUP35Q8NFH5 326 aa3.7□□□□□ -1.82
PABPC1-223ENST00000523636 KLF14Q8TD94 323 aaPredicted RBP3.7□□□□□ -1.82
PABPC1-223ENST00000523636 HIST1H2BHQ93079 126 aa3.7□□□□□ -1.82
PABPC1-223ENST00000523636 HIST1H2BNQ99877 126 aa3.7□□□□□ -1.82
PABPC1-223ENST00000523636 HIST1H2BMQ99879 126 aa3.7□□□□□ -1.82
PABPC1-223ENST00000523636 TXNDC17Q9BRA2 123 aa3.7□□□□□ -1.82
PABPC1-223ENST00000523636 ANAPC13Q9BS18 74 aa3.7□□□□□ -1.82
PABPC1-223ENST00000523636 WDR61Q9GZS3 305 aaKnown RBP3.7□□□□□ -1.82
PABPC1-223ENST00000523636 FGF23Q9GZV9 251 aaPredicted RBP3.7□□□□□ -1.82
PABPC1-223ENST00000523636 MANBALQ9NQG1 85 aa3.7□□□□□ -1.82
PABPC1-223ENST00000523636 KCNIP2Q9NS61 270 aa3.7□□□□□ -1.82
PABPC1-223ENST00000523636 GNG13Q9P2W3 67 aa3.7□□□□□ -1.82
PABPC1-223ENST00000523636 UQCR10Q9UDW1 63 aa3.7□□□□□ -1.82
PABPC1-223ENST00000523636 LOC107984640A0A0U1RRK4 108 aa3.69□□□□□ -1.82
PABPC1-223ENST00000523636 CTXND1A0A1B0GTU2 59 aa3.69□□□□□ -1.82
PABPC1-223ENST00000523636 NUPR2A6NF83 97 aa3.69□□□□□ -1.82
PABPC1-223ENST00000523636 ZNF727A8MUV8 499 aa3.69□□□□□ -1.82
PABPC1-223ENST00000523636 KLLNB2CW77 178 aa3.69□□□□□ -1.82
PABPC1-223ENST00000523636 PRAC2D3DTV9 90 aa3.69□□□□□ -1.82
PABPC1-223ENST00000523636 TMEM250H0YL14 139 aa3.69□□□□□ -1.82
PABPC1-223ENST00000523636 K7EQG2 157 aa3.69□□□□□ -1.82
PABPC1-223ENST00000523636 YPEL1O60688 119 aa3.69□□□□□ -1.82
PABPC1-223ENST00000523636 KRASP01116 189 aa3.69□□□□□ -1.82
PABPC1-223ENST00000523636 IGKV1-5P01602 117 aa3.69□□□□□ -1.82
PABPC1-223ENST00000523636 LINC00694P0DN24 101 aa3.69□□□□□ -1.82
PABPC1-223ENST00000523636 ERCC8Q13216 396 aa3.69□□□□□ -1.82
PABPC1-223ENST00000523636 C6orf99Q4VX62 202 aa3.69□□□□□ -1.82
PABPC1-223ENST00000523636 LCN15Q6UWW0 184 aa3.69□□□□□ -1.82
PABPC1-223ENST00000523636 TMEM14EPQ6UXP3 125 aa3.69□□□□□ -1.82
PABPC1-223ENST00000523636 TEX43Q6ZNM6 134 aa3.69□□□□□ -1.82
PABPC1-223ENST00000523636 ZNF493Q6ZR52 646 aa3.69□□□□□ -1.82
PABPC1-223ENST00000523636 Q8N7P7 452 aa3.69□□□□□ -1.82
PABPC1-223ENST00000523636 CYYR1Q96J86 154 aa3.69□□□□□ -1.82
PABPC1-223ENST00000523636 IGF2BP2-AS1Q96M15 143 aa3.69□□□□□ -1.82
PABPC1-223ENST00000523636 YPEL2Q96QA6 119 aa3.69□□□□□ -1.82
PABPC1-223ENST00000523636 OR4C12Q96R67 309 aa3.69□□□□□ -1.82
PABPC1-223ENST00000523636 PAXXQ9BUH6 204 aa3.69□□□□□ -1.82
PABPC1-223ENST00000523636 RPRMQ9NS64 109 aa3.69□□□□□ -1.82
PABPC1-223ENST00000523636 CYSLTR1Q9Y271 337 aa3.69□□□□□ -1.82
PABPC1-223ENST00000523636 TRAV5A0A0B4J249 113 aa3.68□□□□□ -1.82
PABPC1-223ENST00000523636 TRAV4A0A0B4J268 109 aa3.68□□□□□ -1.82
PABPC1-223ENST00000523636 IGHV3-38A0A0C4DH36 116 aa3.68□□□□□ -1.82
PABPC1-223ENST00000523636 A0A0J9YXV3 536 aa3.68□□□□□ -1.82
PABPC1-223ENST00000523636 LOC389332A0A1B0GUA5 103 aa3.68□□□□□ -1.82
PABPC1-223ENST00000523636 ZFP92A6NM28 416 aa3.68□□□□□ -1.82
PABPC1-223ENST00000523636 ZNF705GA8MUZ8 300 aaPredicted RBP3.68□□□□□ -1.82
PABPC1-223ENST00000523636 ISLRO14498 428 aa3.68□□□□□ -1.82
PABPC1-223ENST00000523636 HRASP01112 189 aa3.68□□□□□ -1.82
PABPC1-223ENST00000523636 IAPPP10997 89 aa3.68□□□□□ -1.82
PABPC1-223ENST00000523636 ZNF138P52744 262 aa3.68□□□□□ -1.82
PABPC1-223ENST00000523636 MP68P56378 58 aa3.68□□□□□ -1.82
PABPC1-223ENST00000523636 ELOBQ15370 118 aa3.68□□□□□ -1.82
PABPC1-223ENST00000523636 LCE1AQ5T7P2 110 aa3.68□□□□□ -1.82
PABPC1-223ENST00000523636 Q5VSD8 79 aa3.68□□□□□ -1.82
PABPC1-223ENST00000523636 Q5XG85 94 aa3.68□□□□□ -1.82
PABPC1-223ENST00000523636 LCN12Q6JVE5 192 aa3.68□□□□□ -1.82
PABPC1-223ENST00000523636 HCP5Q6MZN7 132 aa3.68□□□□□ -1.82
PABPC1-223ENST00000523636 MRPL54Q6P161 138 aaKnown RBP3.68□□□□□ -1.82
PABPC1-223ENST00000523636 Q6ZR03 302 aa3.68□□□□□ -1.82
PABPC1-223ENST00000523636 LINC00173Q6ZV60 143 aa3.68□□□□□ -1.82
PABPC1-223ENST00000523636 PRNTQ86SH4 94 aa3.68□□□□□ -1.82
PABPC1-223ENST00000523636 TTC9CQ8N5M4 171 aa3.68□□□□□ -1.82
PABPC1-223ENST00000523636 STPG4Q8N801 248 aa3.68□□□□□ -1.82
PABPC1-223ENST00000523636 CYB561D1Q8N8Q1 229 aa3.68□□□□□ -1.82
PABPC1-223ENST00000523636 OR4B1Q8NGF8 309 aa3.68□□□□□ -1.82
PABPC1-223ENST00000523636 OR8B3Q8NGG8 313 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms