RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 RBMY1EA6NEQ0 496 aaKnown RBP10.15□□□□□ -0.78
TCOF1-213ENST00000514442 RBMY1DP0C7P1 496 aaKnown RBP10.15□□□□□ -0.78
TCOF1-213ENST00000514442 RBMY1A1P0DJD3 496 aaKnown RBP10.15□□□□□ -0.78
TCOF1-213ENST00000514442 RBMY1CP0DJD4 496 aa10.15□□□□□ -0.78
TCOF1-213ENST00000514442 CFAP126Q5VTH2 177 aa10.15□□□□□ -0.78
TCOF1-213ENST00000514442 DYSFO75923 2080 aa10.15□□□□□ -0.78
TCOF1-213ENST00000514442 DAZAP2Q15038 168 aaPredicted RBP10.15□□□□□ -0.78
TCOF1-213ENST00000514442 FBXL19-AS1Q494R0 122 aa10.15□□□□□ -0.78
TCOF1-213ENST00000514442 PTPN13Q12923 2485 aa10.15□□□□□ -0.79
TCOF1-213ENST00000514442 IGLV11-55A0A075B6I3 123 aa10.15□□□□□ -0.79
TCOF1-213ENST00000514442 TRBV10-2A0A0K0K1G8 114 aa10.15□□□□□ -0.79
TCOF1-213ENST00000514442 INS-IGF2F8WCM5 200 aa10.15□□□□□ -0.79
TCOF1-213ENST00000514442 LINC00158P58513 81 aa10.15□□□□□ -0.79
TCOF1-213ENST00000514442 FOXE3Q13461 319 aa10.15□□□□□ -0.79
TCOF1-213ENST00000514442 OVOL2Q9BRP0 275 aa10.15□□□□□ -0.79
TCOF1-213ENST00000514442 A4D1N5 150 aa10.14□□□□□ -0.79
TCOF1-213ENST00000514442 S100A7L2Q5SY68 101 aa10.14□□□□□ -0.79
TCOF1-213ENST00000514442 AGPAT4-IT1Q9H0P7 198 aa10.14□□□□□ -0.79
TCOF1-213ENST00000514442 MRPL36Q9P0J6 103 aaKnown RBP10.14□□□□□ -0.79
TCOF1-213ENST00000514442 IGHV3-38A0A0C4DH36 116 aa10.14□□□□□ -0.79
TCOF1-213ENST00000514442 CCDC179H3BU77 68 aa10.14□□□□□ -0.79
TCOF1-213ENST00000514442 SLURP1P55000 103 aa10.14□□□□□ -0.79
TCOF1-213ENST00000514442 TRPT1Q86TN4 253 aaKnown RBP10.14□□□□□ -0.79
TCOF1-213ENST00000514442 ZFP2Q6ZN57 461 aa10.14□□□□□ -0.79
TCOF1-213ENST00000514442 CFHR4Q92496 578 aa10.14□□□□□ -0.79
TCOF1-213ENST00000514442 H3BUA1 57 aa10.13□□□□□ -0.79
TCOF1-213ENST00000514442 CTSGP08311 255 aa10.13□□□□□ -0.79
TCOF1-213ENST00000514442 U3KQK5 164 aa10.13□□□□□ -0.79
TCOF1-213ENST00000514442 TEX22C9J3V5 150 aa10.13□□□□□ -0.79
TCOF1-213ENST00000514442 MRPL23Q16540 153 aaKnown RBP10.13□□□□□ -0.79
TCOF1-213ENST00000514442 MAPKAPK5-AS1Q8N8E1 139 aa10.13□□□□□ -0.79
TCOF1-213ENST00000514442 Q8N1Y9 231 aa10.13□□□□□ -0.79
TCOF1-213ENST00000514442 C5orf56Q8N8D9 126 aa10.13□□□□□ -0.79
TCOF1-213ENST00000514442 LY6G5BQ8NDX9 201 aa10.13□□□□□ -0.79
TCOF1-213ENST00000514442 AJUBAQ96IF1 538 aa10.13□□□□□ -0.79
TCOF1-213ENST00000514442 PRORYQ9H606 182 aa10.13□□□□□ -0.79
TCOF1-213ENST00000514442 LEPROTO15243 131 aa10.12□□□□□ -0.79
TCOF1-213ENST00000514442 IGKV1D-37A0A075B6S9 117 aa10.12□□□□□ -0.79
TCOF1-213ENST00000514442 GNRH2O43555 120 aa10.12□□□□□ -0.79
TCOF1-213ENST00000514442 PROP1O75360 226 aa10.12□□□□□ -0.79
TCOF1-213ENST00000514442 FAM110AQ9BQ89 295 aa10.12□□□□□ -0.79
TCOF1-213ENST00000514442 TOMM6Q96B49 74 aa10.11□□□□□ -0.79
TCOF1-213ENST00000514442 SDHAF1A6NFY7 115 aa10.11□□□□□ -0.79
TCOF1-213ENST00000514442 MYCNOSP40205 109 aa10.11□□□□□ -0.79
TCOF1-213ENST00000514442 MUSTN1Q8IVN3 82 aa10.11□□□□□ -0.79
TCOF1-213ENST00000514442 PIEZO1Q92508 2521 aa10.11□□□□□ -0.79
TCOF1-213ENST00000514442 SIRPDQ9H106 197 aa10.11□□□□□ -0.79
TCOF1-213ENST00000514442 BAALCQ8WXS3 180 aa10.1□□□□□ -0.79
TCOF1-213ENST00000514442 UBE2DNLQ8IWF7 75 aa10.1□□□□□ -0.79
TCOF1-213ENST00000514442 ICOSQ9Y6W8 199 aa10.1□□□□□ -0.79
TCOF1-213ENST00000514442 VWC2LB2RUY7 222 aa10.1□□□□□ -0.79
TCOF1-213ENST00000514442 F5H768 121 aa10.1□□□□□ -0.79
TCOF1-213ENST00000514442 ATOX1O00244 68 aa10.1□□□□□ -0.79
TCOF1-213ENST00000514442 APRG1Q8IVJ8 170 aa10.1□□□□□ -0.79
TCOF1-213ENST00000514442 H3BT86 120 aa10.09□□□□□ -0.79
TCOF1-213ENST00000514442 CCL24O00175 119 aa10.09□□□□□ -0.79
TCOF1-213ENST00000514442 RHODO00212 210 aa10.09□□□□□ -0.79
TCOF1-213ENST00000514442 C1orf229Q6ZS94 237 aaPredicted RBP10.09□□□□□ -0.79
TCOF1-213ENST00000514442 NDUFA12Q9UI09 145 aa10.09□□□□□ -0.79
TCOF1-213ENST00000514442 ZNRF2Q8NHG8 242 aa10.09□□□□□ -0.79
TCOF1-213ENST00000514442 ATRXP46100 2492 aa10.09□□□□□ -0.79
TCOF1-213ENST00000514442 RBAKDNA6NC62 111 aa10.08□□□□□ -0.8
TCOF1-213ENST00000514442 ZNF625Q96I27 306 aaPredicted RBP10.08□□□□□ -0.8
TCOF1-213ENST00000514442 DAD1P61803 113 aa10.08□□□□□ -0.8
TCOF1-213ENST00000514442 ATP5G1P05496 136 aa10.08□□□□□ -0.8
TCOF1-213ENST00000514442 RASL10AQ92737 203 aa10.08□□□□□ -0.8
TCOF1-213ENST00000514442 A0A0B4J2C4 111 aa10.08□□□□□ -0.8
TCOF1-213ENST00000514442 ATG2AQ2TAZ0 1938 aa10.08□□□□□ -0.8
TCOF1-213ENST00000514442 A0A096LPF7 62 aa10.07□□□□□ -0.8
TCOF1-213ENST00000514442 I3L3M4 83 aa10.07□□□□□ -0.8
TCOF1-213ENST00000514442 SRSF2Q01130 221 aaKnown RBP10.07□□□□□ -0.8
TCOF1-213ENST00000514442 DEFB1P60022 68 aa10.07□□□□□ -0.8
TCOF1-213ENST00000514442 C6orf226Q5I0X4 101 aa10.07□□□□□ -0.8
TCOF1-213ENST00000514442 IGHV4OR15-8A0A075B7B6 117 aa10.06□□□□□ -0.8
TCOF1-213ENST00000514442 A0A087WW49 117 aa10.06□□□□□ -0.8
TCOF1-213ENST00000514442 PAX4O43316 350 aa10.06□□□□□ -0.8
TCOF1-213ENST00000514442 BUB3O43684 328 aa10.06□□□□□ -0.8
TCOF1-213ENST00000514442 CGB3P0DN86 165 aa10.06□□□□□ -0.8
TCOF1-213ENST00000514442 CGB7P0DN87 165 aa10.06□□□□□ -0.8
TCOF1-213ENST00000514442 PRAC2D3DTV9 90 aa10.06□□□□□ -0.8
TCOF1-213ENST00000514442 UQCRQO14949 82 aa10.06□□□□□ -0.8
TCOF1-213ENST00000514442 CRYGCP07315 174 aa10.06□□□□□ -0.8
TCOF1-213ENST00000514442 GATD1Q8NB37 220 aa10.06□□□□□ -0.8
TCOF1-213ENST00000514442 SOCS3O14543 225 aa10.06□□□□□ -0.8
TCOF1-213ENST00000514442 TMEM86BQ8N661 226 aa10.06□□□□□ -0.8
TCOF1-213ENST00000514442 RPL39LQ96EH5 51 aaKnown RBP10.06□□□□□ -0.8
TCOF1-213ENST00000514442 TRAV4A0A0B4J268 109 aa10.06□□□□□ -0.8
TCOF1-213ENST00000514442 TEX49A0A1B0GTD5 131 aa10.06□□□□□ -0.8
TCOF1-213ENST00000514442 LMO4P61968 165 aa10.06□□□□□ -0.8
TCOF1-213ENST00000514442 PRIMA1Q86XR5 153 aa10.05□□□□□ -0.8
TCOF1-213ENST00000514442 TRBV12-3P01733 135 aa10.05□□□□□ -0.8
TCOF1-213ENST00000514442 RNASE13Q5GAN3 156 aaKnown RBP10.05□□□□□ -0.8
TCOF1-213ENST00000514442 Q6Q795 121 aa10.05□□□□□ -0.8
TCOF1-213ENST00000514442 C3orf22Q8N5N4 141 aa10.05□□□□□ -0.8
TCOF1-213ENST00000514442 LINC01548A6NM66 108 aa10.05□□□□□ -0.8
TCOF1-213ENST00000514442 LRP4O75096 1905 aa10.05□□□□□ -0.8
TCOF1-213ENST00000514442 TRBV7-3A0A075B6L6 115 aa10.04□□□□□ -0.8
TCOF1-213ENST00000514442 C11orf86A6NJI1 115 aa10.04□□□□□ -0.8
TCOF1-213ENST00000514442 BAALC-AS2P0C853 105 aa10.04□□□□□ -0.8
TCOF1-213ENST00000514442 WI2-2373I1.2A0A1W2PRP0 233 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms