RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 SH2D1AO60880 128 aa8.33□□□□□ -1.08
VEGFA-216ENST00000512683 S100A4P26447 101 aaKnown RBP8.33□□□□□ -1.08
VEGFA-216ENST00000512683 ASIPP42127 132 aa8.33□□□□□ -1.08
VEGFA-216ENST00000512683 Q8N976 141 aa8.33□□□□□ -1.08
VEGFA-216ENST00000512683 FMC1Q96HJ9 113 aa8.33□□□□□ -1.08
VEGFA-216ENST00000512683 SAMD10Q9BYL1 202 aa8.33□□□□□ -1.08
VEGFA-216ENST00000512683 M0R036 132 aa8.32□□□□□ -1.08
VEGFA-216ENST00000512683 LTAP01374 205 aa8.32□□□□□ -1.08
VEGFA-216ENST00000512683 ARMS2P0C7Q2 107 aa8.32□□□□□ -1.08
VEGFA-216ENST00000512683 LINC00694P0DN24 101 aa8.32□□□□□ -1.08
VEGFA-216ENST00000512683 ZNF674Q2M3X9 581 aa8.32□□□□□ -1.08
VEGFA-216ENST00000512683 DMRTA1Q5VZB9 504 aa8.32□□□□□ -1.08
VEGFA-216ENST00000512683 CST9LP1Q5W188 147 aa8.32□□□□□ -1.08
VEGFA-216ENST00000512683 STOML3Q8TAV4 291 aa8.32□□□□□ -1.08
VEGFA-216ENST00000512683 MBD3L1Q8WWY6 194 aa8.32□□□□□ -1.08
VEGFA-216ENST00000512683 TCEAL7Q9BRU2 100 aa8.32□□□□□ -1.08
VEGFA-216ENST00000512683 DNAH8Q96JB1 4490 aa8.32□□□□□ -1.08
VEGFA-216ENST00000512683 A0A0D9SG52 128 aa8.31□□□□□ -1.08
VEGFA-216ENST00000512683 GRIFINA4D1Z8 144 aa8.31□□□□□ -1.08
VEGFA-216ENST00000512683 H3BVH4 76 aa8.31□□□□□ -1.08
VEGFA-216ENST00000512683 PAGE4O60829 102 aa8.31□□□□□ -1.08
VEGFA-216ENST00000512683 UBE2G1P62253 170 aa8.31□□□□□ -1.08
VEGFA-216ENST00000512683 ELOBQ15370 118 aa8.31□□□□□ -1.08
VEGFA-216ENST00000512683 LGALSLQ3ZCW2 172 aaPredicted RBP8.31□□□□□ -1.08
VEGFA-216ENST00000512683 FAM162BQ5T6X4 162 aa8.31□□□□□ -1.08
VEGFA-216ENST00000512683 SFT2D1Q8WV19 159 aa8.31□□□□□ -1.08
VEGFA-216ENST00000512683 CHCHD7Q9BUK0 85 aa8.31□□□□□ -1.08
VEGFA-216ENST00000512683 UMAD1C9J7I0 102 aa8.3□□□□□ -1.08
VEGFA-216ENST00000512683 RHODO00212 210 aa8.3□□□□□ -1.08
VEGFA-216ENST00000512683 BCL2L11O43521 198 aa8.3□□□□□ -1.08
VEGFA-216ENST00000512683 LINC01559Q495D7 138 aa8.3□□□□□ -1.08
VEGFA-216ENST00000512683 SERTAD4-AS1Q5TG53 156 aa8.3□□□□□ -1.08
VEGFA-216ENST00000512683 C14orf178Q8N769 122 aaPredicted RBP8.3□□□□□ -1.08
VEGFA-216ENST00000512683 FAM213BQ8TBF2 198 aa8.3□□□□□ -1.08
VEGFA-216ENST00000512683 URGCP-MRPS24S4R325 110 aa8.3□□□□□ -1.08
VEGFA-216ENST00000512683 GAGE12JA6NER3 117 aa8.29□□□□□ -1.08
VEGFA-216ENST00000512683 HAMPP81172 84 aa8.29□□□□□ -1.08
VEGFA-216ENST00000512683 GAGE1Q13065 139 aa8.29□□□□□ -1.08
VEGFA-216ENST00000512683 GAGE4Q13068 117 aa8.29□□□□□ -1.08
VEGFA-216ENST00000512683 GAGE5Q13069 117 aa8.29□□□□□ -1.08
VEGFA-216ENST00000512683 GAGE13Q4V321 117 aa8.29□□□□□ -1.08
VEGFA-216ENST00000512683 LINC00528Q8N1L1 170 aa8.29□□□□□ -1.08
VEGFA-216ENST00000512683 Q8N3U1 123 aa8.29□□□□□ -1.08
VEGFA-216ENST00000512683 SYT8Q8NBV8 401 aa8.29□□□□□ -1.08
VEGFA-216ENST00000512683 ZNF471Q9BX82 626 aaPredicted RBP8.29□□□□□ -1.08
VEGFA-216ENST00000512683 TMSB15BA0A087X1C1 80 aa8.28□□□□□ -1.08
VEGFA-216ENST00000512683 A0A1B0GV50 99 aa8.28□□□□□ -1.08
VEGFA-216ENST00000512683 SCO2A0A1W2PP80 73 aa8.28□□□□□ -1.08
VEGFA-216ENST00000512683 KANTRA0A1W2PQU2 76 aa8.28□□□□□ -1.08
VEGFA-216ENST00000512683 AKR1C3P42330 323 aa8.28□□□□□ -1.08
VEGFA-216ENST00000512683 DAZ4Q86SG3 579 aaKnown RBP8.28□□□□□ -1.08
VEGFA-216ENST00000512683 SFRP2Q96HF1 295 aa8.28□□□□□ -1.08
VEGFA-216ENST00000512683 MLST8Q9BVC4 326 aa8.28□□□□□ -1.08
VEGFA-216ENST00000512683 DAZ3Q9NR90 486 aaKnown RBP8.28□□□□□ -1.08
VEGFA-216ENST00000512683 TRBV10-1A0A0K0K1A3 114 aa8.27□□□□□ -1.09
VEGFA-216ENST00000512683 RBFOX3A6NFN3 312 aa8.27□□□□□ -1.09
VEGFA-216ENST00000512683 OXTP01178 125 aa8.27□□□□□ -1.09
VEGFA-216ENST00000512683 Q0VG73 95 aa8.27□□□□□ -1.09
VEGFA-216ENST00000512683 WFDC2Q14508 124 aa8.27□□□□□ -1.09
VEGFA-216ENST00000512683 KCNIP4Q6PIL6 250 aa8.27□□□□□ -1.09
VEGFA-216ENST00000512683 TMUB2Q71RG4 321 aa8.27□□□□□ -1.09
VEGFA-216ENST00000512683 NIT1Q86X76 327 aa8.27□□□□□ -1.09
VEGFA-216ENST00000512683 CHAC1Q9BUX1 264 aa8.27□□□□□ -1.09
VEGFA-216ENST00000512683 PHLDA3Q9Y5J5 127 aa8.27□□□□□ -1.09
VEGFA-216ENST00000512683 A0A087WWL8 130 aa8.26□□□□□ -1.09
VEGFA-216ENST00000512683 M0R381 172 aa8.26□□□□□ -1.09
VEGFA-216ENST00000512683 S100A9P06702 114 aaKnown RBP8.26□□□□□ -1.09
VEGFA-216ENST00000512683 H2AFB1P0C5Y9 115 aa8.26□□□□□ -1.09
VEGFA-216ENST00000512683 TPT1P13693 172 aaKnown RBP8.26□□□□□ -1.09
VEGFA-216ENST00000512683 CCL20P78556 96 aa8.26□□□□□ -1.09
VEGFA-216ENST00000512683 RPL19P84098 196 aaKnown RBP8.26□□□□□ -1.09
VEGFA-216ENST00000512683 C14orf177Q52M58 125 aa8.26□□□□□ -1.09
VEGFA-216ENST00000512683 FAM74A4Q5TZK3 123 aa8.26□□□□□ -1.09
VEGFA-216ENST00000512683 ATRAIDQ6UW56 229 aa8.26□□□□□ -1.09
VEGFA-216ENST00000512683 BAALCQ8WXS3 180 aa8.26□□□□□ -1.09
VEGFA-216ENST00000512683 A0A087WX48 190 aa8.25□□□□□ -1.09
VEGFA-216ENST00000512683 BAGE2Q86Y30 109 aa8.25□□□□□ -1.09
VEGFA-216ENST00000512683 IGKV2D-24A0A075B6R9 120 aa8.24□□□□□ -1.09
VEGFA-216ENST00000512683 EIF5AP63241 154 aaKnown RBP8.24□□□□□ -1.09
VEGFA-216ENST00000512683 AKAP14Q86UN6 197 aa8.24□□□□□ -1.09
VEGFA-216ENST00000512683 ZFP82Q8N141 532 aa8.24□□□□□ -1.09
VEGFA-216ENST00000512683 SSBP4Q9BWG4 385 aaPredicted RBP8.24□□□□□ -1.09
VEGFA-216ENST00000512683 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.23□□□□□ -1.09
VEGFA-216ENST00000512683 TRAV1-1A0A0B4J248 108 aa8.23□□□□□ -1.09
VEGFA-216ENST00000512683 LECT2O14960 151 aa8.23□□□□□ -1.09
VEGFA-216ENST00000512683 IGLV2-8P01709 118 aa8.23□□□□□ -1.09
VEGFA-216ENST00000512683 CXCL1P09341 107 aa8.23□□□□□ -1.09
VEGFA-216ENST00000512683 PKIAP61925 76 aa8.23□□□□□ -1.09
VEGFA-216ENST00000512683 RPL36AP83881 106 aaKnown RBP8.23□□□□□ -1.09
VEGFA-216ENST00000512683 SCXQ7RTU7 201 aa8.23□□□□□ -1.09
VEGFA-216ENST00000512683 OR10AG1Q8NH19 301 aa8.23□□□□□ -1.09
VEGFA-216ENST00000512683 RPL36ALQ969Q0 106 aaKnown RBP8.23□□□□□ -1.09
VEGFA-216ENST00000512683 DERL1Q9BUN8 251 aa8.23□□□□□ -1.09
VEGFA-216ENST00000512683 KLK12Q9UKR0 248 aa8.23□□□□□ -1.09
VEGFA-216ENST00000512683 TRBV7-3A0A075B6L6 115 aa8.22□□□□□ -1.09
VEGFA-216ENST00000512683 SNAI2O43623 268 aa8.22□□□□□ -1.09
VEGFA-216ENST00000512683 RPL35P42766 123 aaKnown RBP8.22□□□□□ -1.09
VEGFA-216ENST00000512683 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.22□□□□□ -1.09
VEGFA-216ENST00000512683 OR10G8Q8NGN5 311 aa8.22□□□□□ -1.09
VEGFA-216ENST00000512683 C11orf52Q96A22 123 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms