RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 GAGE1Q13065 139 aa3.98□□□□□ -1.77
LSM3P4-201ENST00000502948 GAGE4Q13068 117 aa3.98□□□□□ -1.77
LSM3P4-201ENST00000502948 GAGE5Q13069 117 aa3.98□□□□□ -1.77
LSM3P4-201ENST00000502948 ZNF674Q2M3X9 581 aa3.98□□□□□ -1.77
LSM3P4-201ENST00000502948 LGALSLQ3ZCW2 172 aaPredicted RBP3.98□□□□□ -1.77
LSM3P4-201ENST00000502948 GAGE13Q4V321 117 aa3.98□□□□□ -1.77
LSM3P4-201ENST00000502948 TMEM97Q5BJF2 176 aa3.98□□□□□ -1.77
LSM3P4-201ENST00000502948 OR11H4Q8NGC9 324 aa3.98□□□□□ -1.77
LSM3P4-201ENST00000502948 CIRBP-AS1Q8TBR5 109 aa3.98□□□□□ -1.77
LSM3P4-201ENST00000502948 BAALCQ8WXS3 180 aa3.98□□□□□ -1.77
LSM3P4-201ENST00000502948 SGK494Q96LW2 274 aa3.98□□□□□ -1.77
LSM3P4-201ENST00000502948 HMCN2Q8NDA2 5059 aa3.98□□□□□ -1.77
LSM3P4-201ENST00000502948 LRP1Q07954 4544 aaKnown RBP3.98□□□□□ -1.77
LSM3P4-201ENST00000502948 FAT3Q8TDW7 4589 aa3.97□□□□□ -1.77
LSM3P4-201ENST00000502948 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.97□□□□□ -1.77
LSM3P4-201ENST00000502948 A0A087WX48 190 aa3.97□□□□□ -1.77
LSM3P4-201ENST00000502948 TRBV6-8A0A0A6YYG3 113 aa3.97□□□□□ -1.77
LSM3P4-201ENST00000502948 B4DEV8 164 aa3.97□□□□□ -1.77
LSM3P4-201ENST00000502948 HMGB3O15347 200 aaKnown RBP3.97□□□□□ -1.77
LSM3P4-201ENST00000502948 EIF3GO75821 320 aaKnown RBP eCLIP3.97□□□□□ -1.77
LSM3P4-201ENST00000502948 ARMS2P0C7Q2 107 aa3.97□□□□□ -1.77
LSM3P4-201ENST00000502948 CRIP1P50238 77 aa3.97□□□□□ -1.77
LSM3P4-201ENST00000502948 RAB4BP61018 213 aa3.97□□□□□ -1.77
LSM3P4-201ENST00000502948 RPL36AP83881 106 aaKnown RBP3.97□□□□□ -1.77
LSM3P4-201ENST00000502948 MIAQ16674 131 aa3.97□□□□□ -1.77
LSM3P4-201ENST00000502948 FAM162BQ5T6X4 162 aa3.97□□□□□ -1.77
LSM3P4-201ENST00000502948 PRR27Q6MZM9 219 aa3.97□□□□□ -1.77
LSM3P4-201ENST00000502948 KCNIP4Q6PIL6 250 aa3.97□□□□□ -1.77
LSM3P4-201ENST00000502948 Q86TA4 180 aa3.97□□□□□ -1.77
LSM3P4-201ENST00000502948 ZFP82Q8N141 532 aa3.97□□□□□ -1.77
LSM3P4-201ENST00000502948 Q8N3U1 123 aa3.97□□□□□ -1.77
LSM3P4-201ENST00000502948 C14orf178Q8N769 122 aaPredicted RBP3.97□□□□□ -1.77
LSM3P4-201ENST00000502948 HSD17B11Q8NBQ5 300 aa3.97□□□□□ -1.77
LSM3P4-201ENST00000502948 OR2T35Q8NGX2 323 aa3.97□□□□□ -1.77
LSM3P4-201ENST00000502948 RPL36ALQ969Q0 106 aaKnown RBP3.97□□□□□ -1.77
LSM3P4-201ENST00000502948 FMC1Q96HJ9 113 aa3.97□□□□□ -1.77
LSM3P4-201ENST00000502948 SSBP4Q9BWG4 385 aaPredicted RBP3.97□□□□□ -1.77
LSM3P4-201ENST00000502948 C1orf43Q9BWL3 253 aa3.97□□□□□ -1.77
LSM3P4-201ENST00000502948 SAMD10Q9BYL1 202 aa3.97□□□□□ -1.77
LSM3P4-201ENST00000502948 PRR34Q9NV39 138 aa3.97□□□□□ -1.77
LSM3P4-201ENST00000502948 Q9UF83 564 aa3.97□□□□□ -1.77
LSM3P4-201ENST00000502948 PHLDA3Q9Y5J5 127 aa3.97□□□□□ -1.77
LSM3P4-201ENST00000502948 IGKV2D-24A0A075B6R9 120 aa3.96□□□□□ -1.78
LSM3P4-201ENST00000502948 A6NHS1 94 aa3.96□□□□□ -1.78
LSM3P4-201ENST00000502948 FAM74A7A6NL05 159 aa3.96□□□□□ -1.78
LSM3P4-201ENST00000502948 H3BVH4 76 aa3.96□□□□□ -1.78
LSM3P4-201ENST00000502948 PEX7O00628 323 aa3.96□□□□□ -1.78
LSM3P4-201ENST00000502948 LTAP01374 205 aa3.96□□□□□ -1.78
LSM3P4-201ENST00000502948 S100A9P06702 114 aaKnown RBP3.96□□□□□ -1.78
LSM3P4-201ENST00000502948 TPT1P13693 172 aaKnown RBP3.96□□□□□ -1.78
LSM3P4-201ENST00000502948 RPL19P84098 196 aaKnown RBP3.96□□□□□ -1.78
LSM3P4-201ENST00000502948 ENHOQ6UWT2 76 aa3.96□□□□□ -1.78
LSM3P4-201ENST00000502948 C9orf163Q8N9P6 203 aa3.96□□□□□ -1.78
LSM3P4-201ENST00000502948 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.96□□□□□ -1.78
LSM3P4-201ENST00000502948 CLRN3Q8NCR9 226 aa3.96□□□□□ -1.78
LSM3P4-201ENST00000502948 UBE2WQ96B02 151 aa3.96□□□□□ -1.78
LSM3P4-201ENST00000502948 ZC2HC1AQ96GY0 325 aa3.96□□□□□ -1.78
LSM3P4-201ENST00000502948 JPT2Q9H910 190 aa3.96□□□□□ -1.78
LSM3P4-201ENST00000502948 VAX2Q9UIW0 290 aa3.96□□□□□ -1.78
LSM3P4-201ENST00000502948 KLK12Q9UKR0 248 aa3.96□□□□□ -1.78
LSM3P4-201ENST00000502948 BORCS7-ASMTA0A0B4J1R7 106 aa3.95□□□□□ -1.78
LSM3P4-201ENST00000502948 LECT2O14960 151 aa3.95□□□□□ -1.78
LSM3P4-201ENST00000502948 SNAI2O43623 268 aa3.95□□□□□ -1.78
LSM3P4-201ENST00000502948 SH2D1AO60880 128 aa3.95□□□□□ -1.78
LSM3P4-201ENST00000502948 IFNA7P01567 189 aa3.95□□□□□ -1.78
LSM3P4-201ENST00000502948 GIPP09681 153 aaPredicted RBP3.95□□□□□ -1.78
LSM3P4-201ENST00000502948 OR5AL1P0C617 328 aa3.95□□□□□ -1.78
LSM3P4-201ENST00000502948 UBE2G1P62253 170 aa3.95□□□□□ -1.78
LSM3P4-201ENST00000502948 CIRBPQ14011 172 aaKnown RBP3.95□□□□□ -1.78
LSM3P4-201ENST00000502948 ZNF726P1Q15940 193 aa3.95□□□□□ -1.78
LSM3P4-201ENST00000502948 Q6ZRU5 148 aa3.95□□□□□ -1.78
LSM3P4-201ENST00000502948 INO80EQ8NBZ0 244 aaPredicted RBP3.95□□□□□ -1.78
LSM3P4-201ENST00000502948 PKHD1L1Q86WI1 4243 aa3.95□□□□□ -1.78
LSM3P4-201ENST00000502948 TRAV8-4A0A0B4J246 113 aa3.94□□□□□ -1.78
LSM3P4-201ENST00000502948 TRAV34A0A0B4J273 112 aa3.94□□□□□ -1.78
LSM3P4-201ENST00000502948 PTTG1O95997 202 aa3.94□□□□□ -1.78
LSM3P4-201ENST00000502948 P01737 135 aa3.94□□□□□ -1.78
LSM3P4-201ENST00000502948 CRPP02741 224 aa3.94□□□□□ -1.78
LSM3P4-201ENST00000502948 GZMBP10144 247 aa3.94□□□□□ -1.78
LSM3P4-201ENST00000502948 CNBPP62633 177 aaKnown RBP3.94□□□□□ -1.78
LSM3P4-201ENST00000502948 FAM74A4Q5TZK3 123 aa3.94□□□□□ -1.78
LSM3P4-201ENST00000502948 NEXN-AS1Q8NBZ9 246 aa3.94□□□□□ -1.78
LSM3P4-201ENST00000502948 RNF185Q96GF1 192 aa3.94□□□□□ -1.78
LSM3P4-201ENST00000502948 MLST8Q9BVC4 326 aa3.94□□□□□ -1.78
LSM3P4-201ENST00000502948 PLA2G2DQ9UNK4 145 aa3.94□□□□□ -1.78
LSM3P4-201ENST00000502948 ALG5Q9Y673 324 aa3.94□□□□□ -1.78
LSM3P4-201ENST00000502948 A0A087WWL8 130 aa3.93□□□□□ -1.78
LSM3P4-201ENST00000502948 A0A1B0GUV1 79 aa3.93□□□□□ -1.78
LSM3P4-201ENST00000502948 RPL37AP61513 92 aaKnown RBP3.93□□□□□ -1.78
LSM3P4-201ENST00000502948 IQCJQ1A5X6 159 aa3.93□□□□□ -1.78
LSM3P4-201ENST00000502948 LINC01620Q4KN68 170 aa3.93□□□□□ -1.78
LSM3P4-201ENST00000502948 MPV17L2Q567V2 206 aa3.93□□□□□ -1.78
LSM3P4-201ENST00000502948 AKR1C8PQ5T2L2 129 aa3.93□□□□□ -1.78
LSM3P4-201ENST00000502948 RPL7L1Q6DKI1 246 aaKnown RBP3.93□□□□□ -1.78
LSM3P4-201ENST00000502948 KRTAP26-1Q6PEX3 210 aa3.93□□□□□ -1.78
LSM3P4-201ENST00000502948 SDIM1Q6ZPB5 146 aa3.93□□□□□ -1.78
LSM3P4-201ENST00000502948 STOML3Q8TAV4 291 aa3.93□□□□□ -1.78
LSM3P4-201ENST00000502948 DAZAP1Q96EP5 407 aaKnown RBP3.93□□□□□ -1.78
LSM3P4-201ENST00000502948 DNAJC30Q96LL9 226 aa3.93□□□□□ -1.78
LSM3P4-201ENST00000502948 MED28Q9H204 178 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms