RNA–Protein interactions for RNA: ENST00000485952.1

SPTLC3-206, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 3

Gene SPTLC3, Length 277 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-206ENST00000485952 Q6ZS49 121 aa2.3□□□□□ -2.04
SPTLC3-206ENST00000485952 FAM24BQ8N5W8 94 aa2.3□□□□□ -2.04
SPTLC3-206ENST00000485952 LINC00304Q8N9R0 145 aa2.3□□□□□ -2.04
SPTLC3-206ENST00000485952 ACY3Q96HD9 319 aa2.3□□□□□ -2.04
SPTLC3-206ENST00000485952 PACRGQ96M98 296 aaPredicted RBP2.3□□□□□ -2.04
SPTLC3-206ENST00000485952 CMSS1Q9BQ75 279 aaKnown RBP2.3□□□□□ -2.04
SPTLC3-206ENST00000485952 GINS4Q9BRT9 223 aa2.3□□□□□ -2.04
SPTLC3-206ENST00000485952 UPK3BQ9BT76 320 aa2.3□□□□□ -2.04
SPTLC3-206ENST00000485952 TMEM70Q9BUB7 260 aa2.3□□□□□ -2.04
SPTLC3-206ENST00000485952 KRTAP4-4Q9BYR3 166 aa2.3□□□□□ -2.04
SPTLC3-206ENST00000485952 RABAC1Q9UI14 185 aa2.3□□□□□ -2.04
SPTLC3-206ENST00000485952 MRPS16Q9Y3D3 137 aaKnown RBP2.3□□□□□ -2.04
SPTLC3-206ENST00000485952 VPS13BQ7Z7G8 4022 aa2.3□□□□□ -2.04
SPTLC3-206ENST00000485952 TEX50A0A1B0GTY4 177 aa2.29□□□□□ -2.04
SPTLC3-206ENST00000485952 A0A1W2PNN7 141 aa2.29□□□□□ -2.04
SPTLC3-206ENST00000485952 IRGMA1A4Y4 181 aa2.29□□□□□ -2.04
SPTLC3-206ENST00000485952 K7EIM0 57 aa2.29□□□□□ -2.04
SPTLC3-206ENST00000485952 DENRO43583 198 aaKnown RBP2.29□□□□□ -2.04
SPTLC3-206ENST00000485952 C1QBP02746 253 aa2.29□□□□□ -2.04
SPTLC3-206ENST00000485952 ORM2P19652 201 aa2.29□□□□□ -2.04
SPTLC3-206ENST00000485952 CXCL2P19875 107 aa2.29□□□□□ -2.04
SPTLC3-206ENST00000485952 CXCL3P19876 107 aa2.29□□□□□ -2.04
SPTLC3-206ENST00000485952 SNRPD3P62318 126 aaKnown RBP2.29□□□□□ -2.04
SPTLC3-206ENST00000485952 RPL30P62888 115 aaKnown RBP2.29□□□□□ -2.04
SPTLC3-206ENST00000485952 WT1-ASQ06250 92 aa2.29□□□□□ -2.04
SPTLC3-206ENST00000485952 MSMO1Q15800 293 aa2.29□□□□□ -2.04
SPTLC3-206ENST00000485952 LGALSLQ3ZCW2 172 aaPredicted RBP2.29□□□□□ -2.04
SPTLC3-206ENST00000485952 OGFRL1Q5TC84 451 aaPredicted RBP2.29□□□□□ -2.04
SPTLC3-206ENST00000485952 XAF1Q6GPH4 301 aa2.29□□□□□ -2.04
SPTLC3-206ENST00000485952 TOMM20LQ6UXN7 152 aa2.29□□□□□ -2.04
SPTLC3-206ENST00000485952 ZFAND2AQ8N6M9 145 aa2.29□□□□□ -2.04
SPTLC3-206ENST00000485952 OR1L8Q8NGR8 309 aa2.29□□□□□ -2.04
SPTLC3-206ENST00000485952 DCANP1Q8TF63 244 aa2.29□□□□□ -2.04
SPTLC3-206ENST00000485952 CYGBQ8WWM9 190 aa2.29□□□□□ -2.04
SPTLC3-206ENST00000485952 HIST1H2BAQ96A08 127 aa2.29□□□□□ -2.04
SPTLC3-206ENST00000485952 ARHGAP5-AS1Q96IT6 56 aa2.29□□□□□ -2.04
SPTLC3-206ENST00000485952 PECRQ9BY49 303 aa2.29□□□□□ -2.04
SPTLC3-206ENST00000485952 LPAR5Q9H1C0 372 aa2.29□□□□□ -2.04
SPTLC3-206ENST00000485952 DCSTAMPQ9H295 470 aa2.29□□□□□ -2.04
SPTLC3-206ENST00000485952 HRASLSQ9HDD0 168 aa2.29□□□□□ -2.04
SPTLC3-206ENST00000485952 NDUFA4L2Q9NRX3 87 aa2.29□□□□□ -2.04
SPTLC3-206ENST00000485952 FKBP11Q9NYL4 201 aa2.29□□□□□ -2.04
SPTLC3-206ENST00000485952 ARL2BPQ9Y2Y0 163 aa2.29□□□□□ -2.04
SPTLC3-206ENST00000485952 AP4S1Q9Y587 144 aa2.29□□□□□ -2.04
SPTLC3-206ENST00000485952 H3BNG1 76 aa2.28□□□□□ -2.04
SPTLC3-206ENST00000485952 I3L2K1 104 aa2.28□□□□□ -2.04
SPTLC3-206ENST00000485952 GNG7O60262 68 aa2.28□□□□□ -2.04
SPTLC3-206ENST00000485952 HLA-DRB4P13762 266 aa2.28□□□□□ -2.04
SPTLC3-206ENST00000485952 MYL12AP19105 171 aa2.28□□□□□ -2.04
SPTLC3-206ENST00000485952 CRYBB3P26998 211 aa2.28□□□□□ -2.04
SPTLC3-206ENST00000485952 B2MP61769 119 aa2.28□□□□□ -2.04
SPTLC3-206ENST00000485952 RRN3P1Q2M238 152 aa2.28□□□□□ -2.04
SPTLC3-206ENST00000485952 PSMG4Q5JS54 123 aa2.28□□□□□ -2.04
SPTLC3-206ENST00000485952 Q6ZRN7 208 aaPredicted RBP2.28□□□□□ -2.04
SPTLC3-206ENST00000485952 SCXQ7RTU7 201 aa2.28□□□□□ -2.04
SPTLC3-206ENST00000485952 ZNF664Q8N3J9 261 aa2.28□□□□□ -2.04
SPTLC3-206ENST00000485952 LSM10Q969L4 123 aaKnown RBP2.28□□□□□ -2.04
SPTLC3-206ENST00000485952 MED28Q9H204 178 aa2.28□□□□□ -2.04
SPTLC3-206ENST00000485952 HLA-DRB4X5D2U9 266 aa2.28□□□□□ -2.04
SPTLC3-206ENST00000485952 A0A087WTM6 91 aa2.27□□□□□ -2.05
SPTLC3-206ENST00000485952 TRAV3A0A0B4J244 114 aa2.27□□□□□ -2.05
SPTLC3-206ENST00000485952 K7EP13 123 aa2.27□□□□□ -2.05
SPTLC3-206ENST00000485952 SLC25A20O43772 301 aa2.27□□□□□ -2.05
SPTLC3-206ENST00000485952 SNAPC5O75971 98 aa2.27□□□□□ -2.05
SPTLC3-206ENST00000485952 MT-CO2P00403 227 aa2.27□□□□□ -2.05
SPTLC3-206ENST00000485952 TYMSP04818 313 aa2.27□□□□□ -2.05
SPTLC3-206ENST00000485952 DEFB130BP0DP73 79 aa2.27□□□□□ -2.05
SPTLC3-206ENST00000485952 DEFB130AP0DP74 79 aa2.27□□□□□ -2.05
SPTLC3-206ENST00000485952 ATP5G3P48201 142 aa2.27□□□□□ -2.05
SPTLC3-206ENST00000485952 ARPC4P59998 168 aa2.27□□□□□ -2.05
SPTLC3-206ENST00000485952 PSG9Q00887 426 aa2.27□□□□□ -2.05
SPTLC3-206ENST00000485952 ESRGQ1W209 222 aa2.27□□□□□ -2.05
SPTLC3-206ENST00000485952 ACSM3Q53FZ2 586 aa2.27□□□□□ -2.05
SPTLC3-206ENST00000485952 ATP5L2Q7Z4Y8 100 aa2.27□□□□□ -2.05
SPTLC3-206ENST00000485952 TVP23CQ96ET8 276 aa2.27□□□□□ -2.05
SPTLC3-206ENST00000485952 IGF2BP2-AS1Q96M15 143 aa2.27□□□□□ -2.05
SPTLC3-206ENST00000485952 PARD6GQ9BYG4 376 aaPredicted RBP2.27□□□□□ -2.05
SPTLC3-206ENST00000485952 EIF5A2Q9GZV4 153 aaKnown RBP2.27□□□□□ -2.05
SPTLC3-206ENST00000485952 FAM107BQ9H098 131 aa2.27□□□□□ -2.05
SPTLC3-206ENST00000485952 TAS2R8Q9NYW2 309 aa2.27□□□□□ -2.05
SPTLC3-206ENST00000485952 PRNDQ9UKY0 176 aa2.27□□□□□ -2.05
SPTLC3-206ENST00000485952 TRAV30A0A087WSZ9 112 aa2.26□□□□□ -2.05
SPTLC3-206ENST00000485952 LOC100130705A0A1B0GUX0 176 aa2.26□□□□□ -2.05
SPTLC3-206ENST00000485952 EFCAB10A6NFE3 127 aa2.26□□□□□ -2.05
SPTLC3-206ENST00000485952 J3QRK9 145 aa2.26□□□□□ -2.05
SPTLC3-206ENST00000485952 SSNA1O43805 119 aa2.26□□□□□ -2.05
SPTLC3-206ENST00000485952 NFYAP23511 347 aaPredicted RBP2.26□□□□□ -2.05
SPTLC3-206ENST00000485952 FUSP35637 526 aaKnown RBP eCLIP2.26□□□□□ -2.05
SPTLC3-206ENST00000485952 ERHP84090 104 aaKnown RBP2.26□□□□□ -2.05
SPTLC3-206ENST00000485952 CATR1Q13166 79 aa2.26□□□□□ -2.05
SPTLC3-206ENST00000485952 HSD17B12Q53GQ0 312 aa2.26□□□□□ -2.05
SPTLC3-206ENST00000485952 FOXI2Q6ZQN5 318 aa2.26□□□□□ -2.05
SPTLC3-206ENST00000485952 C1orf158Q8N1D5 194 aa2.26□□□□□ -2.05
SPTLC3-206ENST00000485952 OR4C16Q8NGL9 310 aa2.26□□□□□ -2.05
SPTLC3-206ENST00000485952 Q8WTZ3 238 aa2.26□□□□□ -2.05
SPTLC3-206ENST00000485952 BORCS5Q969J3 196 aa2.26□□□□□ -2.05
SPTLC3-206ENST00000485952 GNPNAT1Q96EK6 184 aaPredicted RBP2.26□□□□□ -2.05
SPTLC3-206ENST00000485952 TSC22D3Q99576 134 aa2.26□□□□□ -2.05
SPTLC3-206ENST00000485952 MAP1LC3AQ9H492 121 aa2.26□□□□□ -2.05
SPTLC3-206ENST00000485952 IGKV2-24A0A0C4DH68 120 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms