RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16■□□□□ 0.15
SDF4-206ENST00000478938 CEP250Q9BV73 2442 aa15.99■□□□□ 0.15
SDF4-206ENST00000478938 ZDBF2Q9HCK1 2354 aa15.99■□□□□ 0.15
SDF4-206ENST00000478938 IGHV1-69DA0A0B4J2H0 117 aa15.99■□□□□ 0.15
SDF4-206ENST00000478938 RPS28P62857 69 aaKnown RBP15.99■□□□□ 0.15
SDF4-206ENST00000478938 CCL17Q92583 94 aa15.99■□□□□ 0.15
SDF4-206ENST00000478938 IGLV11-55A0A075B6I3 123 aa15.99■□□□□ 0.15
SDF4-206ENST00000478938 LST1O00453 97 aa15.99■□□□□ 0.15
SDF4-206ENST00000478938 IGF1P05019 195 aa15.99■□□□□ 0.15
SDF4-206ENST00000478938 PRSS2P07478 247 aa15.99■□□□□ 0.15
SDF4-206ENST00000478938 C2orf48Q96LS8 159 aa15.99■□□□□ 0.15
SDF4-206ENST00000478938 OPRPNQ99935 248 aaPredicted RBP15.99■□□□□ 0.15
SDF4-206ENST00000478938 BUB1B-PAK6H3BSN5 160 aa15.98■□□□□ 0.15
SDF4-206ENST00000478938 IGLV1-47P01700 117 aa15.98■□□□□ 0.15
SDF4-206ENST00000478938 PKDREJQ9NTG1 2253 aa15.98■□□□□ 0.15
SDF4-206ENST00000478938 F5H768 121 aa15.98■□□□□ 0.15
SDF4-206ENST00000478938 IGHG3P01860 377 aa15.98■□□□□ 0.15
SDF4-206ENST00000478938 COX6CP09669 75 aa15.98■□□□□ 0.15
SDF4-206ENST00000478938 OVOL1O14753 267 aa15.97■□□□□ 0.15
SDF4-206ENST00000478938 CTSGP08311 255 aa15.97■□□□□ 0.15
SDF4-206ENST00000478938 C4orf26Q17RF5 130 aa15.97■□□□□ 0.15
SDF4-206ENST00000478938 A0A0J9YXY3 114 aa15.97■□□□□ 0.15
SDF4-206ENST00000478938 NPC2P61916 151 aa15.97■□□□□ 0.15
SDF4-206ENST00000478938 OXTP01178 125 aa15.96■□□□□ 0.15
SDF4-206ENST00000478938 CRYGAP11844 174 aa15.96■□□□□ 0.15
SDF4-206ENST00000478938 LINC00643Q86TS7 51 aa15.96■□□□□ 0.15
SDF4-206ENST00000478938 TMEM141Q96I45 108 aa15.96■□□□□ 0.15
SDF4-206ENST00000478938 S100A4P26447 101 aaKnown RBP15.96■□□□□ 0.15
SDF4-206ENST00000478938 I3L3M4 83 aa15.95■□□□□ 0.14
SDF4-206ENST00000478938 C22orf34Q6ZV56 151 aa15.95■□□□□ 0.14
SDF4-206ENST00000478938 PHLDA3Q9Y5J5 127 aa15.95■□□□□ 0.14
SDF4-206ENST00000478938 DUX5Q96PT3 197 aa15.95■□□□□ 0.14
SDF4-206ENST00000478938 TMEM178BH3BS89 294 aa15.94■□□□□ 0.14
SDF4-206ENST00000478938 RP1L1Q8IWN7 2480 aaPredicted RBP15.94■□□□□ 0.14
SDF4-206ENST00000478938 IGHV3-49A0A0A0MS15 119 aa15.94■□□□□ 0.14
SDF4-206ENST00000478938 ACYP1P07311 99 aa15.94■□□□□ 0.14
SDF4-206ENST00000478938 HRCT1Q6UXD1 115 aa15.94■□□□□ 0.14
SDF4-206ENST00000478938 TIMM17AQ99595 171 aa15.94■□□□□ 0.14
SDF4-206ENST00000478938 ATP5G1P05496 136 aa15.93■□□□□ 0.14
SDF4-206ENST00000478938 LITAFQ99732 161 aa15.93■□□□□ 0.14
SDF4-206ENST00000478938 ADAMTSL4-AS1Q5T5F5 129 aa15.92■□□□□ 0.14
SDF4-206ENST00000478938 DPH3Q96FX2 82 aa15.92■□□□□ 0.14
SDF4-206ENST00000478938 POLEQ07864 2286 aa15.92■□□□□ 0.14
SDF4-206ENST00000478938 BOD1L1Q8NFC6 3051 aa15.92■□□□□ 0.14
SDF4-206ENST00000478938 DSCR8Q96T75 97 aa15.91■□□□□ 0.14
SDF4-206ENST00000478938 A0A1W2PNU3 283 aaPredicted RBP15.91■□□□□ 0.14
SDF4-206ENST00000478938 NBR2O15453 112 aa15.9■□□□□ 0.14
SDF4-206ENST00000478938 BUB3O43684 328 aa15.9■□□□□ 0.14
SDF4-206ENST00000478938 TRACP01848 142 aa15.9■□□□□ 0.14
SDF4-206ENST00000478938 NDPQ00604 133 aa15.9■□□□□ 0.14
SDF4-206ENST00000478938 RHOHQ15669 191 aa15.9■□□□□ 0.14
SDF4-206ENST00000478938 C5orf38Q86SI9 138 aa15.9■□□□□ 0.14
SDF4-206ENST00000478938 DCANP1Q8TF63 244 aa15.9■□□□□ 0.14
SDF4-206ENST00000478938 SDHAF1A6NFY7 115 aa15.89■□□□□ 0.13
SDF4-206ENST00000478938 SEM1Q6ZVN7 128 aa15.89■□□□□ 0.13
SDF4-206ENST00000478938 NSUN5P1Q3KNT7 163 aa15.88■□□□□ 0.13
SDF4-206ENST00000478938 C9orf47Q6ZRZ4 202 aa15.88■□□□□ 0.13
SDF4-206ENST00000478938 SPANXDQ9BXN6 97 aa15.88■□□□□ 0.13
SDF4-206ENST00000478938 TRAV12-3A0A0B4J271 114 aa15.88■□□□□ 0.13
SDF4-206ENST00000478938 A0A0J9YX75 114 aa15.88■□□□□ 0.13
SDF4-206ENST00000478938 A0A0J9YXV3 536 aa15.88■□□□□ 0.13
SDF4-206ENST00000478938 PPP1R17O96001 155 aa15.88■□□□□ 0.13
SDF4-206ENST00000478938 POLR2KP53803 58 aaKnown RBP15.88■□□□□ 0.13
SDF4-206ENST00000478938 ZFAND3Q9H8U3 227 aa15.88■□□□□ 0.13
SDF4-206ENST00000478938 TRBV7-1A0A0A6YYK4 115 aa15.87■□□□□ 0.13
SDF4-206ENST00000478938 JPT2Q9H910 190 aa15.86■□□□□ 0.13
SDF4-206ENST00000478938 GNRH2O43555 120 aa15.86■□□□□ 0.13
SDF4-206ENST00000478938 COL27A1Q8IZC6 1860 aaPredicted RBP15.86■□□□□ 0.13
SDF4-206ENST00000478938 Q5XG85 94 aa15.85■□□□□ 0.13
SDF4-206ENST00000478938 RNF5Q99942 180 aa15.85■□□□□ 0.13
SDF4-206ENST00000478938 IGHV3-30-3P0DP02 117 aa15.85■□□□□ 0.13
SDF4-206ENST00000478938 SUMO4Q6EEV6 95 aa15.85■□□□□ 0.13
SDF4-206ENST00000478938 TIMM21Q9BVV7 248 aa15.85■□□□□ 0.13
SDF4-206ENST00000478938 MUC4Q99102 2169 aa15.85■□□□□ 0.13
SDF4-206ENST00000478938 PRRC2AP48634 2157 aaKnown RBP15.85■□□□□ 0.13
SDF4-206ENST00000478938 RS1O15537 224 aa15.84■□□□□ 0.13
SDF4-206ENST00000478938 CXCL5P42830 114 aa15.84■□□□□ 0.13
SDF4-206ENST00000478938 LINC00315P59091 139 aa15.84■□□□□ 0.13
SDF4-206ENST00000478938 VCYO14598 125 aa15.84■□□□□ 0.13
SDF4-206ENST00000478938 ASCL5Q7RTU5 278 aa15.84■□□□□ 0.13
SDF4-206ENST00000478938 TMEM61Q8N0U2 210 aa15.84■□□□□ 0.13
SDF4-206ENST00000478938 RNF152Q8N8N0 203 aa15.84■□□□□ 0.13
SDF4-206ENST00000478938 ATOX1O00244 68 aa15.83■□□□□ 0.13
SDF4-206ENST00000478938 DEFB1P60022 68 aa15.83■□□□□ 0.13
SDF4-206ENST00000478938 HIST1H4AP62805 103 aaKnown RBP15.83■□□□□ 0.13
SDF4-206ENST00000478938 NCOR1O75376 2440 aa15.83■□□□□ 0.13
SDF4-206ENST00000478938 CLPSL1A2RUU4 121 aa15.83■□□□□ 0.12
SDF4-206ENST00000478938 SDIM1Q6ZPB5 146 aa15.83■□□□□ 0.12
SDF4-206ENST00000478938 SPANXCQ9NY87 97 aa15.83■□□□□ 0.12
SDF4-206ENST00000478938 A0A087WWL8 130 aa15.82■□□□□ 0.12
SDF4-206ENST00000478938 TMEM258P61165 79 aa15.82■□□□□ 0.12
SDF4-206ENST00000478938 FAM19A4Q96LR4 140 aa15.82■□□□□ 0.12
SDF4-206ENST00000478938 TRAV13-1A0A0B4J241 112 aa15.82■□□□□ 0.12
SDF4-206ENST00000478938 LY6LH3BQJ8 138 aa15.82■□□□□ 0.12
SDF4-206ENST00000478938 ZFAND2AQ8N6M9 145 aa15.82■□□□□ 0.12
SDF4-206ENST00000478938 ABCA4P78363 2273 aa15.82■□□□□ 0.12
SDF4-206ENST00000478938 F5H697 171 aa15.82■□□□□ 0.12
SDF4-206ENST00000478938 RNASE3P12724 160 aaKnown RBP15.82■□□□□ 0.12
SDF4-206ENST00000478938 FAM27E3Q08E93 113 aa15.82■□□□□ 0.12
SDF4-206ENST00000478938 KIF25-AS1Q9Y6Z4 181 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms