RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 SAV1Q9H4B6 383 aaPredicted RBP2.51□□□□□ -2.01
UBR3-209ENST00000477461 SMDT1Q9H4I9 107 aa2.51□□□□□ -2.01
UBR3-209ENST00000477461 EPDR1Q9UM22 224 aa2.51□□□□□ -2.01
UBR3-209ENST00000477461 AKAP9Q99996 3911 aa2.51□□□□□ -2.01
UBR3-209ENST00000477461 STAB1Q9NY15 2570 aa2.51□□□□□ -2.01
UBR3-209ENST00000477461 VPS13CQ709C8 3753 aa2.5□□□□□ -2.01
UBR3-209ENST00000477461 NF1P21359 2839 aa2.5□□□□□ -2.01
UBR3-209ENST00000477461 NIPBLQ6KC79 2804 aaeCLIP2.5□□□□□ -2.01
UBR3-209ENST00000477461 F6UB75 175 aa2.5□□□□□ -2.01
UBR3-209ENST00000477461 NDUFS6O75380 124 aaKnown RBP2.5□□□□□ -2.01
UBR3-209ENST00000477461 SNAPINO95295 136 aa2.5□□□□□ -2.01
UBR3-209ENST00000477461 GPX1P07203 203 aa2.5□□□□□ -2.01
UBR3-209ENST00000477461 SRP19P09132 144 aaKnown RBP2.5□□□□□ -2.01
UBR3-209ENST00000477461 ZNF705DP0CH99 300 aaPredicted RBP2.5□□□□□ -2.01
UBR3-209ENST00000477461 ZNF705BP0CI00 300 aaPredicted RBP2.5□□□□□ -2.01
UBR3-209ENST00000477461 PRB4P10163 310 aaPredicted RBP2.5□□□□□ -2.01
UBR3-209ENST00000477461 HLA-DRB4P13762 266 aa2.5□□□□□ -2.01
UBR3-209ENST00000477461 GNG4P50150 75 aa2.5□□□□□ -2.01
UBR3-209ENST00000477461 ZNF138P52744 262 aa2.5□□□□□ -2.01
UBR3-209ENST00000477461 APOC4P55056 127 aa2.5□□□□□ -2.01
UBR3-209ENST00000477461 DEFB1P60022 68 aa2.5□□□□□ -2.01
UBR3-209ENST00000477461 NDUFA5Q16718 116 aa2.5□□□□□ -2.01
UBR3-209ENST00000477461 DEFB121Q5J5C9 76 aa2.5□□□□□ -2.01
UBR3-209ENST00000477461 SOHLH1Q5JUK2 328 aa2.5□□□□□ -2.01
UBR3-209ENST00000477461 SAPCD1Q5SSQ6 148 aa2.5□□□□□ -2.01
UBR3-209ENST00000477461 MORN3Q6PF18 240 aaPredicted RBP2.5□□□□□ -2.01
UBR3-209ENST00000477461 UQCC3Q6UW78 93 aa2.5□□□□□ -2.01
UBR3-209ENST00000477461 PRNTQ86SH4 94 aa2.5□□□□□ -2.01
UBR3-209ENST00000477461 DEFB125Q8N687 156 aa2.5□□□□□ -2.01
UBR3-209ENST00000477461 TMEM75Q8N9X5 138 aa2.5□□□□□ -2.01
UBR3-209ENST00000477461 TMEM101Q96IK0 257 aa2.5□□□□□ -2.01
UBR3-209ENST00000477461 LINC00477Q96M19 166 aa2.5□□□□□ -2.01
UBR3-209ENST00000477461 SMIM7Q9BQ49 75 aa2.5□□□□□ -2.01
UBR3-209ENST00000477461 SLC35B3Q9H1N7 401 aa2.5□□□□□ -2.01
UBR3-209ENST00000477461 BIN3Q9NQY0 253 aa2.5□□□□□ -2.01
UBR3-209ENST00000477461 PSG8Q9UQ74 426 aa2.5□□□□□ -2.01
UBR3-209ENST00000477461 HLA-DRB4X5D2U9 266 aa2.5□□□□□ -2.01
UBR3-209ENST00000477461 LOC102724200A0A096LPH7 203 aaPredicted RBP2.49□□□□□ -2.01
UBR3-209ENST00000477461 TRAV8-1A0A0A6YYK1 113 aa2.49□□□□□ -2.01
UBR3-209ENST00000477461 LINC00862A6NCI5 91 aa2.49□□□□□ -2.01
UBR3-209ENST00000477461 ZNF727A8MUV8 499 aa2.49□□□□□ -2.01
UBR3-209ENST00000477461 F8W036 122 aa2.49□□□□□ -2.01
UBR3-209ENST00000477461 H3BMM0 161 aa2.49□□□□□ -2.01
UBR3-209ENST00000477461 INSP01308 110 aa2.49□□□□□ -2.01
UBR3-209ENST00000477461 SFTA3P0C7M3 94 aa2.49□□□□□ -2.01
UBR3-209ENST00000477461 MGST1P10620 155 aaKnown RBP2.49□□□□□ -2.01
UBR3-209ENST00000477461 RPL35P42766 123 aaKnown RBP2.49□□□□□ -2.01
UBR3-209ENST00000477461 CDKN1BP46527 198 aa2.49□□□□□ -2.01
UBR3-209ENST00000477461 FXYD7P58549 80 aa2.49□□□□□ -2.01
UBR3-209ENST00000477461 TAS2R60P59551 318 aa2.49□□□□□ -2.01
UBR3-209ENST00000477461 DAZ2Q13117 558 aaKnown RBP2.49□□□□□ -2.01
UBR3-209ENST00000477461 ERCC8Q13216 396 aa2.49□□□□□ -2.01
UBR3-209ENST00000477461 TMEM183BQ1AE95 376 aa2.49□□□□□ -2.01
UBR3-209ENST00000477461 SPINK13Q1W4C9 94 aa2.49□□□□□ -2.01
UBR3-209ENST00000477461 CENPWQ5EE01 88 aa2.49□□□□□ -2.01
UBR3-209ENST00000477461 CASC10Q5T4H9 136 aa2.49□□□□□ -2.01
UBR3-209ENST00000477461 GDF5OSQ5U4N7 250 aa2.49□□□□□ -2.01
UBR3-209ENST00000477461 Q86TA4 180 aa2.49□□□□□ -2.01
UBR3-209ENST00000477461 BAGE2Q86Y30 109 aa2.49□□□□□ -2.01
UBR3-209ENST00000477461 Q8TAT8 98 aa2.49□□□□□ -2.01
UBR3-209ENST00000477461 ODF3Q96PU9 254 aa2.49□□□□□ -2.01
UBR3-209ENST00000477461 NIPSNAP3BQ9BS92 247 aa2.49□□□□□ -2.01
UBR3-209ENST00000477461 TMEM208Q9BTX3 173 aa2.49□□□□□ -2.01
UBR3-209ENST00000477461 AGPAT4-IT1Q9H0P7 198 aa2.49□□□□□ -2.01
UBR3-209ENST00000477461 WFDC10AQ9H1F0 79 aa2.49□□□□□ -2.01
UBR3-209ENST00000477461 DAZ3Q9NR90 486 aaKnown RBP2.49□□□□□ -2.01
UBR3-209ENST00000477461 ZNF492Q9P255 531 aa2.49□□□□□ -2.01
UBR3-209ENST00000477461 ZFP30Q9Y2G7 519 aa2.49□□□□□ -2.01
UBR3-209ENST00000477461 LENEPQ9Y5L5 61 aa2.49□□□□□ -2.01
UBR3-209ENST00000477461 KIR2DL5BA0A0G2JN68 375 aa2.48□□□□□ -2.01
UBR3-209ENST00000477461 KIR2DL5BA0A0G2JPC4 375 aa2.48□□□□□ -2.01
UBR3-209ENST00000477461 A0A0J9YXY3 114 aa2.48□□□□□ -2.01
UBR3-209ENST00000477461 TRBV6-1A0A0K0K1D8 114 aa2.48□□□□□ -2.01
UBR3-209ENST00000477461 C7orf71A4D174 169 aa2.48□□□□□ -2.01
UBR3-209ENST00000477461 C9JCJ5 164 aa2.48□□□□□ -2.01
UBR3-209ENST00000477461 M0R036 132 aa2.48□□□□□ -2.01
UBR3-209ENST00000477461 M0R2Z0 102 aa2.48□□□□□ -2.01
UBR3-209ENST00000477461 CA1P00915 261 aaPredicted RBP2.48□□□□□ -2.01
UBR3-209ENST00000477461 GCGP01275 180 aa2.48□□□□□ -2.01
UBR3-209ENST00000477461 LTAP01374 205 aa2.48□□□□□ -2.01
UBR3-209ENST00000477461 RNASE4P34096 147 aaKnown RBP2.48□□□□□ -2.01
UBR3-209ENST00000477461 ADIRFQ15847 76 aa2.48□□□□□ -2.01
UBR3-209ENST00000477461 TMEM241Q24JQ0 296 aa2.48□□□□□ -2.01
UBR3-209ENST00000477461 SMUG1Q53HV7 270 aa2.48□□□□□ -2.01
UBR3-209ENST00000477461 KPRPQ5T749 579 aaPredicted RBP2.48□□□□□ -2.01
UBR3-209ENST00000477461 TMEM183AQ8IXX5 376 aa2.48□□□□□ -2.01
UBR3-209ENST00000477461 KIR2DL5AQ8N109 375 aa2.48□□□□□ -2.01
UBR3-209ENST00000477461 EIF4E3Q8N5X7 224 aaKnown RBP2.48□□□□□ -2.01
UBR3-209ENST00000477461 Q8N9L7 120 aa2.48□□□□□ -2.01
UBR3-209ENST00000477461 KIR2DL5BQ8NHK3 375 aa2.48□□□□□ -2.01
UBR3-209ENST00000477461 TVP23CQ96ET8 276 aa2.48□□□□□ -2.01
UBR3-209ENST00000477461 SMIM12Q96EX1 92 aa2.48□□□□□ -2.01
UBR3-209ENST00000477461 IGF2BP2-AS1Q96M15 143 aa2.48□□□□□ -2.01
UBR3-209ENST00000477461 LINC01587Q99440 93 aa2.48□□□□□ -2.01
UBR3-209ENST00000477461 C20orf144Q9BQM9 153 aa2.48□□□□□ -2.01
UBR3-209ENST00000477461 DERL1Q9BUN8 251 aa2.48□□□□□ -2.01
UBR3-209ENST00000477461 XCL2Q9UBD3 114 aa2.48□□□□□ -2.01
UBR3-209ENST00000477461 NAT8Q9UHE5 227 aa2.48□□□□□ -2.01
UBR3-209ENST00000477461 NAGKQ9UJ70 344 aa2.48□□□□□ -2.01
UBR3-209ENST00000477461 GOLT1BQ9Y3E0 138 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms