RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 ACACAQ13085 2346 aa12.1□□□□□ -0.47
CNOT3-204ENST00000447684 IGHV7-81A0A0B4J1V7 117 aa12.1□□□□□ -0.47
CNOT3-204ENST00000447684 TRAV21A0A0B4J279 112 aa12.1□□□□□ -0.47
CNOT3-204ENST00000447684 Q6Q795 121 aa12.1□□□□□ -0.47
CNOT3-204ENST00000447684 TRIAP1O43715 76 aa12.09□□□□□ -0.47
CNOT3-204ENST00000447684 C20orf173Q96LM9 149 aa12.09□□□□□ -0.47
CNOT3-204ENST00000447684 TRBV10-2A0A0K0K1G8 114 aa12.09□□□□□ -0.47
CNOT3-204ENST00000447684 RPL11P62913 178 aaKnown RBP12.09□□□□□ -0.47
CNOT3-204ENST00000447684 LGALS9O00182 355 aa12.08□□□□□ -0.48
CNOT3-204ENST00000447684 P0DMU3 169 aa12.08□□□□□ -0.48
CNOT3-204ENST00000447684 FAM231AP0DMU4 169 aa12.08□□□□□ -0.48
CNOT3-204ENST00000447684 FAM231CP0DMU5 169 aa12.08□□□□□ -0.48
CNOT3-204ENST00000447684 NPC2P61916 151 aa12.08□□□□□ -0.48
CNOT3-204ENST00000447684 FAM74A4Q5TZK3 123 aa12.08□□□□□ -0.48
CNOT3-204ENST00000447684 ZNF580Q9UK33 172 aa12.08□□□□□ -0.48
CNOT3-204ENST00000447684 IGHV1-69DA0A0B4J2H0 117 aa12.07□□□□□ -0.48
CNOT3-204ENST00000447684 G3V318 75 aa12.07□□□□□ -0.48
CNOT3-204ENST00000447684 PPP1R17O96001 155 aa12.07□□□□□ -0.48
CNOT3-204ENST00000447684 A0A0B4J2C4 111 aa12.07□□□□□ -0.48
CNOT3-204ENST00000447684 F6UB75 175 aa12.07□□□□□ -0.48
CNOT3-204ENST00000447684 M0QXV9 152 aa12.07□□□□□ -0.48
CNOT3-204ENST00000447684 ZNF876PQ49A33 203 aa12.07□□□□□ -0.48
CNOT3-204ENST00000447684 ZFAND2AQ8N6M9 145 aa12.07□□□□□ -0.48
CNOT3-204ENST00000447684 TMEM141Q96I45 108 aa12.07□□□□□ -0.48
CNOT3-204ENST00000447684 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.06□□□□□ -0.48
CNOT3-204ENST00000447684 SDHAF1A6NFY7 115 aa12.06□□□□□ -0.48
CNOT3-204ENST00000447684 RPL13AP40429 203 aaKnown RBP12.06□□□□□ -0.48
CNOT3-204ENST00000447684 CCDC140Q96MF4 163 aa12.06□□□□□ -0.48
CNOT3-204ENST00000447684 PPDPFQ9H3Y8 114 aa12.06□□□□□ -0.48
CNOT3-204ENST00000447684 TMEM95Q3KNT9 176 aa12.06□□□□□ -0.48
CNOT3-204ENST00000447684 CLEC2BQ92478 149 aa12.06□□□□□ -0.48
CNOT3-204ENST00000447684 ATP6V0E1O15342 81 aa12.05□□□□□ -0.48
CNOT3-204ENST00000447684 SUMO4Q6EEV6 95 aa12.05□□□□□ -0.48
CNOT3-204ENST00000447684 TNFRSF18Q9Y5U5 241 aa12.05□□□□□ -0.48
CNOT3-204ENST00000447684 VCYO14598 125 aa12.05□□□□□ -0.48
CNOT3-204ENST00000447684 Q6ZSV7 163 aa12.05□□□□□ -0.48
CNOT3-204ENST00000447684 VMO1Q7Z5L0 202 aa12.05□□□□□ -0.48
CNOT3-204ENST00000447684 LY6G5BQ8NDX9 201 aa12.05□□□□□ -0.48
CNOT3-204ENST00000447684 SPTBN2O15020 2390 aa12.05□□□□□ -0.48
CNOT3-204ENST00000447684 H7C423 109 aa12.04□□□□□ -0.48
CNOT3-204ENST00000447684 RNASE3P12724 160 aaKnown RBP12.04□□□□□ -0.48
CNOT3-204ENST00000447684 MRPL53Q96EL3 112 aaKnown RBP12.04□□□□□ -0.48
CNOT3-204ENST00000447684 B9A039 149 aa12.04□□□□□ -0.48
CNOT3-204ENST00000447684 LEPROTO15243 131 aa12.04□□□□□ -0.48
CNOT3-204ENST00000447684 UBE2E1P51965 193 aa12.04□□□□□ -0.48
CNOT3-204ENST00000447684 PRR30Q53SZ7 412 aaPredicted RBP12.04□□□□□ -0.48
CNOT3-204ENST00000447684 TIMM17AQ99595 171 aa12.04□□□□□ -0.48
CNOT3-204ENST00000447684 M0R2P5 195 aa12.03□□□□□ -0.48
CNOT3-204ENST00000447684 MDFICQ9P1T7 246 aa12.03□□□□□ -0.48
CNOT3-204ENST00000447684 A0A0J9YXV3 536 aa12.03□□□□□ -0.48
CNOT3-204ENST00000447684 ID1P41134 155 aa12.03□□□□□ -0.48
CNOT3-204ENST00000447684 MUC4Q99102 2169 aa12.03□□□□□ -0.48
CNOT3-204ENST00000447684 LINC00527Q9UJ94 153 aa12.03□□□□□ -0.48
CNOT3-204ENST00000447684 VPREB3Q9UKI3 123 aa12.03□□□□□ -0.48
CNOT3-204ENST00000447684 ODF3BA8MYP8 253 aa12.02□□□□□ -0.48
CNOT3-204ENST00000447684 FAM110DQ8TAY7 271 aaPredicted RBP12.02□□□□□ -0.48
CNOT3-204ENST00000447684 LINC00477Q96M19 166 aa12.02□□□□□ -0.48
CNOT3-204ENST00000447684 SPXQ9BT56 116 aa12.02□□□□□ -0.48
CNOT3-204ENST00000447684 ICOSQ9Y6W8 199 aa12.02□□□□□ -0.48
CNOT3-204ENST00000447684 ANKRD11Q6UB99 2663 aaPredicted RBP12.02□□□□□ -0.49
CNOT3-204ENST00000447684 ANKHD1Q8IWZ3 2542 aaKnown RBP12.02□□□□□ -0.49
CNOT3-204ENST00000447684 FAM236AA0A1B0GUQ0 79 aa12.02□□□□□ -0.49
CNOT3-204ENST00000447684 FAM236BA0A1B0GV22 79 aa12.02□□□□□ -0.49
CNOT3-204ENST00000447684 TMEM223A0PJW6 202 aa12.02□□□□□ -0.49
CNOT3-204ENST00000447684 POLR2KP53803 58 aaKnown RBP12.02□□□□□ -0.49
CNOT3-204ENST00000447684 Q8N9W7 124 aa12.02□□□□□ -0.49
CNOT3-204ENST00000447684 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.01□□□□□ -0.49
CNOT3-204ENST00000447684 CD3EP07766 207 aa12.01□□□□□ -0.49
CNOT3-204ENST00000447684 COX6CP09669 75 aa12.01□□□□□ -0.49
CNOT3-204ENST00000447684 ZNF22P17026 224 aaPredicted RBP12.01□□□□□ -0.49
CNOT3-204ENST00000447684 C9orf139Q6ZV77 190 aa12.01□□□□□ -0.49
CNOT3-204ENST00000447684 EEF1AKMT3Q96AZ1 226 aa12.01□□□□□ -0.49
CNOT3-204ENST00000447684 YAE1D1Q9NRH1 226 aa12.01□□□□□ -0.49
CNOT3-204ENST00000447684 NBASA2RRP1 2371 aa12.01□□□□□ -0.49
CNOT3-204ENST00000447684 AKAP6Q13023 2319 aa12.01□□□□□ -0.49
CNOT3-204ENST00000447684 TRAV8-3A0A0A6YYJ7 113 aa12.01□□□□□ -0.49
CNOT3-204ENST00000447684 A0A0J9YXY3 114 aa12.01□□□□□ -0.49
CNOT3-204ENST00000447684 TRBV30A0A0K0K1B3 111 aa12.01□□□□□ -0.49
CNOT3-204ENST00000447684 Q8N6K4 173 aa12.01□□□□□ -0.49
CNOT3-204ENST00000447684 DEFB124Q8NES8 71 aa12.01□□□□□ -0.49
CNOT3-204ENST00000447684 TRGV11A0A075B6L2 103 aa12□□□□□ -0.49
CNOT3-204ENST00000447684 LENEPQ9Y5L5 61 aa12□□□□□ -0.49
CNOT3-204ENST00000447684 LINC00315P59091 139 aa11.99□□□□□ -0.49
CNOT3-204ENST00000447684 LINC01560Q8TB33 94 aa11.99□□□□□ -0.49
CNOT3-204ENST00000447684 LINC01587Q99440 93 aa11.98□□□□□ -0.49
CNOT3-204ENST00000447684 SPANXA1Q9NS26 97 aa11.98□□□□□ -0.49
CNOT3-204ENST00000447684 SPTA1P02549 2419 aa11.98□□□□□ -0.49
CNOT3-204ENST00000447684 ITLN2Q8WWU7 325 aaPredicted RBP11.98□□□□□ -0.49
CNOT3-204ENST00000447684 TMEM101Q96IK0 257 aa11.98□□□□□ -0.49
CNOT3-204ENST00000447684 TMEM126AQ9H061 195 aa11.98□□□□□ -0.49
CNOT3-204ENST00000447684 KIF25-AS1Q9Y6Z4 181 aa11.98□□□□□ -0.49
CNOT3-204ENST00000447684 IGHV4OR15-8A0A075B7B6 117 aa11.97□□□□□ -0.49
CNOT3-204ENST00000447684 A0A087WW49 117 aa11.97□□□□□ -0.49
CNOT3-204ENST00000447684 M0R1W7 72 aa11.97□□□□□ -0.49
CNOT3-204ENST00000447684 OVOL1O14753 267 aa11.97□□□□□ -0.49
CNOT3-204ENST00000447684 C9orf153Q5TBE3 101 aa11.97□□□□□ -0.49
CNOT3-204ENST00000447684 CEMP1Q6PRD7 247 aaPredicted RBP11.97□□□□□ -0.49
CNOT3-204ENST00000447684 PRRC2AP48634 2157 aaKnown RBP11.97□□□□□ -0.49
CNOT3-204ENST00000447684 LINC00694P0DN24 101 aa11.96□□□□□ -0.49
CNOT3-204ENST00000447684 EBI3Q14213 229 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms