RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 SPINK4O60575 86 aa2.07□□□□□ -2.08
LINC00393-201ENST00000443621 SAP30O75446 220 aa2.07□□□□□ -2.08
LINC00393-201ENST00000443621 IGHV3-53P01767 116 aa2.07□□□□□ -2.08
LINC00393-201ENST00000443621 CRYGDP07320 174 aa2.07□□□□□ -2.08
LINC00393-201ENST00000443621 FRMD6-AS1P0C7T7 363 aa2.07□□□□□ -2.08
LINC00393-201ENST00000443621 C3orf79P0CE67 100 aa2.07□□□□□ -2.08
LINC00393-201ENST00000443621 ZNF705DP0CH99 300 aaPredicted RBP2.07□□□□□ -2.08
LINC00393-201ENST00000443621 ZNF705BP0CI00 300 aaPredicted RBP2.07□□□□□ -2.08
LINC00393-201ENST00000443621 EVI2AP22794 236 aa2.07□□□□□ -2.08
LINC00393-201ENST00000443621 APOC4P55056 127 aa2.07□□□□□ -2.08
LINC00393-201ENST00000443621 RIPPLY3P57055 190 aa2.07□□□□□ -2.08
LINC00393-201ENST00000443621 RHOHQ15669 191 aa2.07□□□□□ -2.08
LINC00393-201ENST00000443621 SPINK13Q1W4C9 94 aa2.07□□□□□ -2.08
LINC00393-201ENST00000443621 DEFB136Q30KP8 78 aa2.07□□□□□ -2.08
LINC00393-201ENST00000443621 KIAA1644Q3SXP7 199 aa2.07□□□□□ -2.08
LINC00393-201ENST00000443621 PDZD11Q5EBL8 140 aa2.07□□□□□ -2.08
LINC00393-201ENST00000443621 PRR9Q5T870 116 aa2.07□□□□□ -2.08
LINC00393-201ENST00000443621 LINC01545Q5VT33 79 aa2.07□□□□□ -2.08
LINC00393-201ENST00000443621 UFSP1Q6NVU6 142 aa2.07□□□□□ -2.08
LINC00393-201ENST00000443621 SHISA2Q6UWI4 295 aa2.07□□□□□ -2.08
LINC00393-201ENST00000443621 Q6ZWC4 215 aa2.07□□□□□ -2.08
LINC00393-201ENST00000443621 ERASQ7Z444 233 aa2.07□□□□□ -2.08
LINC00393-201ENST00000443621 GTSCR1Q86UQ5 136 aa2.07□□□□□ -2.08
LINC00393-201ENST00000443621 Q8N1Y9 231 aa2.07□□□□□ -2.08
LINC00393-201ENST00000443621 C11orf72Q8NBR9 251 aa2.07□□□□□ -2.08
LINC00393-201ENST00000443621 CSNK1G2-AS1Q8NCQ2 148 aa2.07□□□□□ -2.08
LINC00393-201ENST00000443621 RNASE8Q8TDE3 154 aaKnown RBP2.07□□□□□ -2.08
LINC00393-201ENST00000443621 URB1-AS1Q96HZ7 61 aa2.07□□□□□ -2.08
LINC00393-201ENST00000443621 TMEM141Q96I45 108 aa2.07□□□□□ -2.08
LINC00393-201ENST00000443621 RCHY1Q96PM5 261 aa2.07□□□□□ -2.08
LINC00393-201ENST00000443621 TIMM17AQ99595 171 aa2.07□□□□□ -2.08
LINC00393-201ENST00000443621 PMCHL2Q9BQD1 86 aa2.07□□□□□ -2.08
LINC00393-201ENST00000443621 SMIM2Q9BVW6 85 aa2.07□□□□□ -2.08
LINC00393-201ENST00000443621 ST20Q9HBF5 79 aa2.07□□□□□ -2.08
LINC00393-201ENST00000443621 C19orf73Q9NVV2 129 aa2.07□□□□□ -2.08
LINC00393-201ENST00000443621 TP53TG1Q9Y2A0 90 aa2.07□□□□□ -2.08
LINC00393-201ENST00000443621 PYGO1Q9Y3Y4 419 aa2.07□□□□□ -2.08
LINC00393-201ENST00000443621 CSDC2Q9Y534 153 aaKnown RBP2.07□□□□□ -2.08
LINC00393-201ENST00000443621 CCDC168Q8NDH2 2452 aa2.07□□□□□ -2.08
LINC00393-201ENST00000443621 TRAV9-2A0A087WT02 112 aa2.06□□□□□ -2.08
LINC00393-201ENST00000443621 TMSB15BA0A087X1C1 80 aa2.06□□□□□ -2.08
LINC00393-201ENST00000443621 A0A096LNJ9 63 aa2.06□□□□□ -2.08
LINC00393-201ENST00000443621 TRAV4A0A0B4J268 109 aa2.06□□□□□ -2.08
LINC00393-201ENST00000443621 CBY3A6NI87 242 aa2.06□□□□□ -2.08
LINC00393-201ENST00000443621 LYRM9A8MSI8 78 aa2.06□□□□□ -2.08
LINC00393-201ENST00000443621 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.06□□□□□ -2.08
LINC00393-201ENST00000443621 I3L3M4 83 aa2.06□□□□□ -2.08
LINC00393-201ENST00000443621 ZNF561-AS1K7EIQ3 104 aa2.06□□□□□ -2.08
LINC00393-201ENST00000443621 M0QY20 66 aa2.06□□□□□ -2.08
LINC00393-201ENST00000443621 CCL25O15444 150 aa2.06□□□□□ -2.08
LINC00393-201ENST00000443621 RS1O15537 224 aa2.06□□□□□ -2.08
LINC00393-201ENST00000443621 GNRH2O43555 120 aa2.06□□□□□ -2.08
LINC00393-201ENST00000443621 NUPR1O60356 82 aa2.06□□□□□ -2.08
LINC00393-201ENST00000443621 NPYP01303 97 aa2.06□□□□□ -2.08
LINC00393-201ENST00000443621 PLNP26678 52 aa2.06□□□□□ -2.08
LINC00393-201ENST00000443621 IFI27P40305 119 aaPredicted RBP2.06□□□□□ -2.08
LINC00393-201ENST00000443621 EGFEM1PQ0D2K5 195 aa2.06□□□□□ -2.08
LINC00393-201ENST00000443621 NSUN5P1Q3KNT7 163 aa2.06□□□□□ -2.08
LINC00393-201ENST00000443621 ZNF876PQ49A33 203 aa2.06□□□□□ -2.08
LINC00393-201ENST00000443621 HIST2H2BCQ6DN03 193 aa2.06□□□□□ -2.08
LINC00393-201ENST00000443621 RNASEKQ6P5S7 137 aaKnown RBP2.06□□□□□ -2.08
LINC00393-201ENST00000443621 C18orf65Q6ZTR6 163 aa2.06□□□□□ -2.08
LINC00393-201ENST00000443621 SH2D6Q7Z4S9 175 aa2.06□□□□□ -2.08
LINC00393-201ENST00000443621 DAZ4Q86SG3 579 aaKnown RBP2.06□□□□□ -2.08
LINC00393-201ENST00000443621 WFDC3Q8IUB2 231 aa2.06□□□□□ -2.08
LINC00393-201ENST00000443621 LINC00612Q8N6U2 182 aa2.06□□□□□ -2.08
LINC00393-201ENST00000443621 TOMM6Q96B49 74 aa2.06□□□□□ -2.08
LINC00393-201ENST00000443621 IFI27L1Q96BM0 104 aa2.06□□□□□ -2.08
LINC00393-201ENST00000443621 LINC01587Q99440 93 aa2.06□□□□□ -2.08
LINC00393-201ENST00000443621 VAMP8Q9BV40 100 aa2.06□□□□□ -2.08
LINC00393-201ENST00000443621 TIMM21Q9BVV7 248 aa2.06□□□□□ -2.08
LINC00393-201ENST00000443621 CSTL1Q9H114 145 aa2.06□□□□□ -2.08
LINC00393-201ENST00000443621 GTSF1LQ9H1H1 148 aa2.06□□□□□ -2.08
LINC00393-201ENST00000443621 DAZ3Q9NR90 486 aaKnown RBP2.06□□□□□ -2.08
LINC00393-201ENST00000443621 MSRB1Q9NZV6 116 aa2.06□□□□□ -2.08
LINC00393-201ENST00000443621 TIMM8BQ9Y5J9 83 aaPredicted RBP2.06□□□□□ -2.08
LINC00393-201ENST00000443621 HIVEP1P15822 2718 aa2.06□□□□□ -2.08
LINC00393-201ENST00000443621 FASNP49327 2511 aaKnown RBP2.06□□□□□ -2.08
LINC00393-201ENST00000443621 TLN2Q9Y4G6 2542 aa2.06□□□□□ -2.08
LINC00393-201ENST00000443621 CUBNO60494 3623 aa2.05□□□□□ -2.08
LINC00393-201ENST00000443621 MUC4Q99102 2169 aa2.05□□□□□ -2.08
LINC00393-201ENST00000443621 IGKV3-7A0A075B6H7 116 aa2.05□□□□□ -2.08
LINC00393-201ENST00000443621 SDHAF1A6NFY7 115 aa2.05□□□□□ -2.08
LINC00393-201ENST00000443621 PCP4L1A6NKN8 68 aa2.05□□□□□ -2.08
LINC00393-201ENST00000443621 F8VRH5 84 aa2.05□□□□□ -2.08
LINC00393-201ENST00000443621 H3BNG1 76 aa2.05□□□□□ -2.08
LINC00393-201ENST00000443621 SPRY2O43597 315 aa2.05□□□□□ -2.08
LINC00393-201ENST00000443621 MIFP14174 115 aa2.05□□□□□ -2.08
LINC00393-201ENST00000443621 ZNF25P17030 456 aaPredicted RBP2.05□□□□□ -2.08
LINC00393-201ENST00000443621 CD33P20138 364 aa2.05□□□□□ -2.08
LINC00393-201ENST00000443621 MALP21145 153 aa2.05□□□□□ -2.08
LINC00393-201ENST00000443621 DDTP30046 118 aa2.05□□□□□ -2.08
LINC00393-201ENST00000443621 TFPI2P48307 235 aa2.05□□□□□ -2.08
LINC00393-201ENST00000443621 SEC11AP67812 179 aa2.05□□□□□ -2.08
LINC00393-201ENST00000443621 MRPS36P82909 103 aaKnown RBP2.05□□□□□ -2.08
LINC00393-201ENST00000443621 RRN3P1Q2M238 152 aa2.05□□□□□ -2.08
LINC00393-201ENST00000443621 PRR31Q5SQ13 230 aa2.05□□□□□ -2.08
LINC00393-201ENST00000443621 MUC21Q5SSG8 566 aa2.05□□□□□ -2.08
LINC00393-201ENST00000443621 CFAP126Q5VTH2 177 aa2.05□□□□□ -2.08
LINC00393-201ENST00000443621 DGAT2L7PQ6IED9 249 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms