RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 AHDC1Q5TGY3 1603 aaPredicted RBP12.95□□□□□ -0.34
RIF1-204ENST00000430328 WFDC10BQ8IUB3 73 aa12.95□□□□□ -0.34
RIF1-204ENST00000430328 TIMM17BO60830 172 aa12.95□□□□□ -0.34
RIF1-204ENST00000430328 PRR4Q16378 134 aa12.95□□□□□ -0.34
RIF1-204ENST00000430328 IGHV3-30P01768 117 aa12.95□□□□□ -0.34
RIF1-204ENST00000430328 IGHV3-33P01772 117 aa12.95□□□□□ -0.34
RIF1-204ENST00000430328 IGHV3-30-3P0DP02 117 aa12.95□□□□□ -0.34
RIF1-204ENST00000430328 IGHV3-30-5P0DP03 117 aa12.95□□□□□ -0.34
RIF1-204ENST00000430328 PINLYPA6NC86 204 aa12.95□□□□□ -0.34
RIF1-204ENST00000430328 ASPHD1Q5U4P2 390 aa12.95□□□□□ -0.34
RIF1-204ENST00000430328 RNF223E7ERA6 249 aa12.94□□□□□ -0.34
RIF1-204ENST00000430328 SPART-AS1P0CW21 52 aa12.94□□□□□ -0.34
RIF1-204ENST00000430328 TRBV7-3A0A075B6L6 115 aa12.94□□□□□ -0.34
RIF1-204ENST00000430328 Q8N1Y9 231 aa12.94□□□□□ -0.34
RIF1-204ENST00000430328 COLQQ9Y215 455 aaPredicted RBP12.94□□□□□ -0.34
RIF1-204ENST00000430328 PMAIP1Q13794 54 aa12.93□□□□□ -0.34
RIF1-204ENST00000430328 ZNRD1Q9P1U0 126 aa12.93□□□□□ -0.34
RIF1-204ENST00000430328 TEX49A0A1B0GTD5 131 aa12.93□□□□□ -0.34
RIF1-204ENST00000430328 LY6HO94772 140 aa12.93□□□□□ -0.34
RIF1-204ENST00000430328 ZNF726P1Q15940 193 aa12.93□□□□□ -0.34
RIF1-204ENST00000430328 ARTNQ5T4W7 220 aa12.93□□□□□ -0.34
RIF1-204ENST00000430328 E9PLD3 99 aa12.93□□□□□ -0.34
RIF1-204ENST00000430328 IGHV1-58A0A0C4DH39 117 aa12.92□□□□□ -0.34
RIF1-204ENST00000430328 C2orf16Q68DN1 1984 aa12.92□□□□□ -0.34
RIF1-204ENST00000430328 K7EN84 100 aa12.92□□□□□ -0.34
RIF1-204ENST00000430328 MIR7-3HGQ8N6C7 128 aa12.92□□□□□ -0.34
RIF1-204ENST00000430328 TICRRQ7Z2Z1 1910 aa12.92□□□□□ -0.34
RIF1-204ENST00000430328 IGLV3-9A0A075B6K5 115 aa12.92□□□□□ -0.34
RIF1-204ENST00000430328 PIK3CD-AS1Q5SR53 167 aa12.91□□□□□ -0.34
RIF1-204ENST00000430328 TET2Q6N021 2002 aaPredicted RBP12.91□□□□□ -0.34
RIF1-204ENST00000430328 A0A0J9YXV3 536 aa12.91□□□□□ -0.34
RIF1-204ENST00000430328 SPAG11BQ08648 103 aa12.91□□□□□ -0.34
RIF1-204ENST00000430328 DOPEY1Q5JWR5 2465 aa12.91□□□□□ -0.34
RIF1-204ENST00000430328 VWA8A3KMH1 1905 aa12.91□□□□□ -0.34
RIF1-204ENST00000430328 LOXL1Q08397 574 aaPredicted RBP12.91□□□□□ -0.34
RIF1-204ENST00000430328 CENPVL3A0A0U1RRI6 287 aa12.91□□□□□ -0.34
RIF1-204ENST00000430328 ENHOQ6UWT2 76 aa12.9□□□□□ -0.34
RIF1-204ENST00000430328 DSCAMO60469 2012 aa12.9□□□□□ -0.34
RIF1-204ENST00000430328 A0A0J9YWU9 116 aa12.9□□□□□ -0.34
RIF1-204ENST00000430328 ZNF491Q8N8L2 437 aa12.9□□□□□ -0.34
RIF1-204ENST00000430328 HHLA3Q9XRX5 114 aa12.9□□□□□ -0.34
RIF1-204ENST00000430328 CCL24O00175 119 aa12.9□□□□□ -0.35
RIF1-204ENST00000430328 ANAPC1Q9H1A4 1944 aa12.9□□□□□ -0.35
RIF1-204ENST00000430328 GPHB5Q86YW7 130 aa12.89□□□□□ -0.35
RIF1-204ENST00000430328 Q8N9L7 120 aa12.89□□□□□ -0.35
RIF1-204ENST00000430328 J3QLI3 93 aa12.89□□□□□ -0.35
RIF1-204ENST00000430328 VPREB1P12018 145 aa12.89□□□□□ -0.35
RIF1-204ENST00000430328 SONP18583 2426 aaKnown RBP12.89□□□□□ -0.35
RIF1-204ENST00000430328 GATA1P15976 413 aaPredicted RBP12.89□□□□□ -0.35
RIF1-204ENST00000430328 C11orf86A6NJI1 115 aa12.88□□□□□ -0.35
RIF1-204ENST00000430328 E7EQL1 145 aa12.88□□□□□ -0.35
RIF1-204ENST00000430328 SERP2Q8N6R1 65 aa12.88□□□□□ -0.35
RIF1-204ENST00000430328 H3BUA1 57 aa12.88□□□□□ -0.35
RIF1-204ENST00000430328 TOMM6Q96B49 74 aa12.88□□□□□ -0.35
RIF1-204ENST00000430328 ZNF581Q9P0T4 197 aa12.88□□□□□ -0.35
RIF1-204ENST00000430328 IGHV4-30-2A0A087WSY4 118 aa12.87□□□□□ -0.35
RIF1-204ENST00000430328 NDUFA7O95182 113 aa12.87□□□□□ -0.35
RIF1-204ENST00000430328 PTPN13Q12923 2485 aa12.87□□□□□ -0.35
RIF1-204ENST00000430328 CSRP3P50461 194 aa12.87□□□□□ -0.35
RIF1-204ENST00000430328 WT1-ASQ06250 92 aa12.87□□□□□ -0.35
RIF1-204ENST00000430328 CDPF1Q6NVV7 123 aa12.87□□□□□ -0.35
RIF1-204ENST00000430328 TCL1BO95988 128 aa12.87□□□□□ -0.35
RIF1-204ENST00000430328 Q96MF0 132 aa12.87□□□□□ -0.35
RIF1-204ENST00000430328 PLXNA3P51805 1871 aa12.86□□□□□ -0.35
RIF1-204ENST00000430328 PTH2Q96A98 100 aa12.86□□□□□ -0.35
RIF1-204ENST00000430328 PIFOQ8TCI5 191 aa12.86□□□□□ -0.35
RIF1-204ENST00000430328 MT-ATP8P03928 68 aa12.86□□□□□ -0.35
RIF1-204ENST00000430328 BLCAPP62952 87 aa12.86□□□□□ -0.35
RIF1-204ENST00000430328 FAM19A3Q7Z5A8 133 aa12.86□□□□□ -0.35
RIF1-204ENST00000430328 F8W735 103 aaPredicted RBP12.85□□□□□ -0.35
RIF1-204ENST00000430328 C9orf66Q5T8R8 295 aa12.85□□□□□ -0.35
RIF1-204ENST00000430328 LMO1P25800 156 aa12.85□□□□□ -0.35
RIF1-204ENST00000430328 TDRG1Q3Y452 100 aa12.85□□□□□ -0.35
RIF1-204ENST00000430328 NDUFA11Q86Y39 141 aa12.85□□□□□ -0.35
RIF1-204ENST00000430328 UNQ6494/PRO21346Q6UXR6 183 aa12.85□□□□□ -0.35
RIF1-204ENST00000430328 C9orf85Q96MD7 179 aa12.85□□□□□ -0.35
RIF1-204ENST00000430328 RPL39P62891 51 aaKnown RBP12.84□□□□□ -0.35
RIF1-204ENST00000430328 COA6Q5JTJ3 125 aaKnown RBP12.84□□□□□ -0.35
RIF1-204ENST00000430328 AGPAT4-IT1Q9H0P7 198 aa12.84□□□□□ -0.35
RIF1-204ENST00000430328 DENND4CQ5VZ89 1909 aa12.84□□□□□ -0.35
RIF1-204ENST00000430328 EXPH5Q8NEV8 1989 aa12.84□□□□□ -0.35
RIF1-204ENST00000430328 CTSGP08311 255 aa12.84□□□□□ -0.35
RIF1-204ENST00000430328 MIAQ16674 131 aa12.84□□□□□ -0.35
RIF1-204ENST00000430328 SNURFQ9Y675 71 aa12.84□□□□□ -0.35
RIF1-204ENST00000430328 SCXQ7RTU7 201 aa12.83□□□□□ -0.35
RIF1-204ENST00000430328 C14orf177Q52M58 125 aa12.83□□□□□ -0.36
RIF1-204ENST00000430328 MAPK1IP1LQ8NDC0 245 aa12.83□□□□□ -0.36
RIF1-204ENST00000430328 LINC00311Q8N616 119 aa12.83□□□□□ -0.36
RIF1-204ENST00000430328 IGKV1-6A0A0C4DH72 117 aa12.83□□□□□ -0.36
RIF1-204ENST00000430328 IGLV3-19P01714 112 aa12.83□□□□□ -0.36
RIF1-204ENST00000430328 SIPA1L1O43166 1804 aa12.82□□□□□ -0.36
RIF1-204ENST00000430328 CD59P13987 128 aa12.82□□□□□ -0.36
RIF1-204ENST00000430328 RNF144BQ7Z419 303 aa12.82□□□□□ -0.36
RIF1-204ENST00000430328 HIGD2AQ9BW72 106 aa12.82□□□□□ -0.36
RIF1-204ENST00000430328 CSRP1P21291 193 aaKnown RBP12.82□□□□□ -0.36
RIF1-204ENST00000430328 C17orf58Q2M2W7 97 aa12.82□□□□□ -0.36
RIF1-204ENST00000430328 A0A0G2JMZ2 1700 aa12.82□□□□□ -0.36
RIF1-204ENST00000430328 LRRC37A2A6NM11 1700 aa12.82□□□□□ -0.36
RIF1-204ENST00000430328 LRRC37AA6NMS7 1700 aa12.82□□□□□ -0.36
RIF1-204ENST00000430328 APRG1Q8IVJ8 170 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms