RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 MUC21A0A0G2JKD1 596 aa11.15□□□□□ -0.62
CALD1-206ENST00000424922 MUC21A0A140T8X8 626 aa11.15□□□□□ -0.62
CALD1-206ENST00000424922 MUC21Q5SSG8 566 aa11.15□□□□□ -0.62
CALD1-206ENST00000424922 SPAG8Q99932 426 aaPredicted RBP11.15□□□□□ -0.62
CALD1-206ENST00000424922 TRBV7-9A0A0J9YWB2 115 aa11.15□□□□□ -0.62
CALD1-206ENST00000424922 LINC01546A6NGU7 62 aa11.15□□□□□ -0.62
CALD1-206ENST00000424922 TSPOP30536 169 aa11.15□□□□□ -0.62
CALD1-206ENST00000424922 HINT1P49773 126 aaPredicted RBP11.15□□□□□ -0.62
CALD1-206ENST00000424922 OR11H12B2RN74 326 aa11.14□□□□□ -0.63
CALD1-206ENST00000424922 SNAI2O43623 268 aa11.14□□□□□ -0.63
CALD1-206ENST00000424922 TSPAN13O95857 204 aa11.14□□□□□ -0.63
CALD1-206ENST00000424922 NPYP01303 97 aa11.14□□□□□ -0.63
CALD1-206ENST00000424922 IGLV1-51P01701 117 aa11.14□□□□□ -0.63
CALD1-206ENST00000424922 CACNG7P62955 275 aa11.14□□□□□ -0.63
CALD1-206ENST00000424922 OR11H2Q8NH07 326 aa11.14□□□□□ -0.63
CALD1-206ENST00000424922 SPATA3Q8NHX4 192 aa11.14□□□□□ -0.63
CALD1-206ENST00000424922 MSRB1Q9NZV6 116 aa11.14□□□□□ -0.63
CALD1-206ENST00000424922 ZNF256Q9Y2P7 627 aaPredicted RBP11.14□□□□□ -0.63
CALD1-206ENST00000424922 A0A096LNJ9 63 aa11.14□□□□□ -0.63
CALD1-206ENST00000424922 DEFB131AP59861 70 aa11.14□□□□□ -0.63
CALD1-206ENST00000424922 C3orf56Q8N813 242 aa11.14□□□□□ -0.63
CALD1-206ENST00000424922 Q6ZVH6 145 aa11.13□□□□□ -0.63
CALD1-206ENST00000424922 FAM19A4Q96LR4 140 aa11.13□□□□□ -0.63
CALD1-206ENST00000424922 MAP1LC3AQ9H492 121 aa11.13□□□□□ -0.63
CALD1-206ENST00000424922 LOC389332A0A1B0GUA5 103 aa11.12□□□□□ -0.63
CALD1-206ENST00000424922 HBDP02042 147 aa11.12□□□□□ -0.63
CALD1-206ENST00000424922 AZU1P20160 251 aa11.12□□□□□ -0.63
CALD1-206ENST00000424922 APRG1Q8IVJ8 170 aa11.12□□□□□ -0.63
CALD1-206ENST00000424922 ZFAND2AQ8N6M9 145 aa11.12□□□□□ -0.63
CALD1-206ENST00000424922 A0A0J9YX75 114 aa11.12□□□□□ -0.63
CALD1-206ENST00000424922 TMEM158Q8WZ71 300 aa11.12□□□□□ -0.63
CALD1-206ENST00000424922 MAP6D1Q9H9H5 199 aa11.12□□□□□ -0.63
CALD1-206ENST00000424922 TNFRSF18Q9Y5U5 241 aa11.12□□□□□ -0.63
CALD1-206ENST00000424922 TRRAPQ9Y4A5 3859 aa11.12□□□□□ -0.63
CALD1-206ENST00000424922 C12orf54Q6X4T0 127 aa11.11□□□□□ -0.63
CALD1-206ENST00000424922 MRAP2Q96G30 205 aa11.11□□□□□ -0.63
CALD1-206ENST00000424922 NXT2Q9NPJ8 142 aaKnown RBP11.11□□□□□ -0.63
CALD1-206ENST00000424922 TRAV21A0A0B4J279 112 aa11.11□□□□□ -0.63
CALD1-206ENST00000424922 SMKR1H3BMG3 65 aa11.11□□□□□ -0.63
CALD1-206ENST00000424922 TAX1BP3O14907 124 aa11.11□□□□□ -0.63
CALD1-206ENST00000424922 IGKV3-20P01619 116 aa11.11□□□□□ -0.63
CALD1-206ENST00000424922 PRR9Q5T870 116 aa11.11□□□□□ -0.63
CALD1-206ENST00000424922 FOXI2Q6ZQN5 318 aa11.11□□□□□ -0.63
CALD1-206ENST00000424922 DEFB125Q8N687 156 aa11.11□□□□□ -0.63
CALD1-206ENST00000424922 KNCNA6PVL3 124 aa11.1□□□□□ -0.63
CALD1-206ENST00000424922 NCR2O95944 276 aa11.1□□□□□ -0.63
CALD1-206ENST00000424922 MED14OSP0DP75 135 aa11.1□□□□□ -0.63
CALD1-206ENST00000424922 OR2K2Q8NGT1 345 aa11.1□□□□□ -0.63
CALD1-206ENST00000424922 TNFRSF6BO95407 300 aa11.09□□□□□ -0.63
CALD1-206ENST00000424922 LGALS9BQ3B8N2 356 aa11.09□□□□□ -0.63
CALD1-206ENST00000424922 LGALS9CQ6DKI2 356 aa11.09□□□□□ -0.63
CALD1-206ENST00000424922 ODF3L2Q3SX64 289 aa11.09□□□□□ -0.63
CALD1-206ENST00000424922 GTF2H5Q6ZYL4 71 aa11.09□□□□□ -0.63
CALD1-206ENST00000424922 NEGR1Q7Z3B1 354 aa11.09□□□□□ -0.63
CALD1-206ENST00000424922 hDV102S1A0JD36 115 aa11.08□□□□□ -0.64
CALD1-206ENST00000424922 DUSP14O95147 198 aaKnown RBP11.08□□□□□ -0.64
CALD1-206ENST00000424922 AMMECR1LQ6DCA0 310 aa11.08□□□□□ -0.64
CALD1-206ENST00000424922 KIR3DS1Q14943 382 aa11.08□□□□□ -0.64
CALD1-206ENST00000424922 C9orf66Q5T8R8 295 aa11.08□□□□□ -0.64
CALD1-206ENST00000424922 Q6ZQT7 251 aa11.08□□□□□ -0.64
CALD1-206ENST00000424922 SCRT2Q9NQ03 307 aa11.08□□□□□ -0.64
CALD1-206ENST00000424922 TIMM8BQ9Y5J9 83 aaPredicted RBP11.08□□□□□ -0.64
CALD1-206ENST00000424922 HLA-DRB4P13762 266 aa11.07□□□□□ -0.64
CALD1-206ENST00000424922 INSL3P51460 131 aa11.07□□□□□ -0.64
CALD1-206ENST00000424922 SPANXN1Q5VSR9 72 aa11.07□□□□□ -0.64
CALD1-206ENST00000424922 Q8N8P6 123 aa11.07□□□□□ -0.64
CALD1-206ENST00000424922 HLA-DRB4X5D2U9 266 aa11.07□□□□□ -0.64
CALD1-206ENST00000424922 EVI2AP22794 236 aa11.06□□□□□ -0.64
CALD1-206ENST00000424922 FCER1GP30273 86 aa11.06□□□□□ -0.64
CALD1-206ENST00000424922 RNASE4P34096 147 aaKnown RBP11.06□□□□□ -0.64
CALD1-206ENST00000424922 HERV-K104P63124 156 aa11.06□□□□□ -0.64
CALD1-206ENST00000424922 SLC25A34Q6PIV7 304 aa11.06□□□□□ -0.64
CALD1-206ENST00000424922 IFI27L1Q96BM0 104 aa11.06□□□□□ -0.64
CALD1-206ENST00000424922 H3BMM0 161 aa11.06□□□□□ -0.64
CALD1-206ENST00000424922 CD7P09564 240 aa11.06□□□□□ -0.64
CALD1-206ENST00000424922 BEAN1Q3B7T3 259 aa11.06□□□□□ -0.64
CALD1-206ENST00000424922 GEMIN7Q9H840 131 aaKnown RBP11.06□□□□□ -0.64
CALD1-206ENST00000424922 IGLV2-18A0A075B6J9 118 aa11.05□□□□□ -0.64
CALD1-206ENST00000424922 H3BVH4 76 aa11.05□□□□□ -0.64
CALD1-206ENST00000424922 ASIPP42127 132 aa11.05□□□□□ -0.64
CALD1-206ENST00000424922 WFDC9Q8NEX5 89 aa11.05□□□□□ -0.64
CALD1-206ENST00000424922 ODF3Q96PU9 254 aa11.05□□□□□ -0.64
CALD1-206ENST00000424922 PMCHL2Q9BQD1 86 aa11.05□□□□□ -0.64
CALD1-206ENST00000424922 KLLNB2CW77 178 aa11.05□□□□□ -0.64
CALD1-206ENST00000424922 GAS8-AS1O95177 125 aa11.05□□□□□ -0.64
CALD1-206ENST00000424922 LEPP41159 167 aa11.05□□□□□ -0.64
CALD1-206ENST00000424922 SMAGPQ0VAQ4 97 aa11.05□□□□□ -0.64
CALD1-206ENST00000424922 AMTNQ6UX39 209 aa11.05□□□□□ -0.64
CALD1-206ENST00000424922 NRACQ8N912 160 aa11.05□□□□□ -0.64
CALD1-206ENST00000424922 MCRIP2Q9BUT9 160 aaKnown RBP11.05□□□□□ -0.64
CALD1-206ENST00000424922 SPINK13Q1W4C9 94 aa11.04□□□□□ -0.64
CALD1-206ENST00000424922 UFSP1Q6NVU6 142 aa11.04□□□□□ -0.64
CALD1-206ENST00000424922 TRAV12-2A0A075B6T6 113 aa11.03□□□□□ -0.64
CALD1-206ENST00000424922 CMC4P56277 68 aaPredicted RBP11.03□□□□□ -0.64
CALD1-206ENST00000424922 FXYD7P58549 80 aa11.03□□□□□ -0.64
CALD1-206ENST00000424922 ANXA2RQ3ZCQ2 193 aa11.03□□□□□ -0.64
CALD1-206ENST00000424922 RBMY1BA6NDE4 496 aaKnown RBP11.03□□□□□ -0.64
CALD1-206ENST00000424922 RBMY1EA6NEQ0 496 aaKnown RBP11.03□□□□□ -0.64
CALD1-206ENST00000424922 GAGE10A6NGK3 116 aa11.03□□□□□ -0.64
CALD1-206ENST00000424922 RBMY1DP0C7P1 496 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms