RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 PYYP10082 97 aa2.57□□□□□ -2
HMGB3P23-201ENST00000414981 SLC25A16P16260 332 aa2.57□□□□□ -2
HMGB3P23-201ENST00000414981 ASIPP42127 132 aa2.57□□□□□ -2
HMGB3P23-201ENST00000414981 DAD1P61803 113 aa2.57□□□□□ -2
HMGB3P23-201ENST00000414981 WT1-ASQ06250 92 aa2.57□□□□□ -2
HMGB3P23-201ENST00000414981 C11orf71Q6IPW1 123 aa2.57□□□□□ -2
HMGB3P23-201ENST00000414981 Q6Q795 121 aa2.57□□□□□ -2
HMGB3P23-201ENST00000414981 CLEC19AQ6UXS0 136 aa2.57□□□□□ -2
HMGB3P23-201ENST00000414981 SCGB1D4Q6XE38 83 aa2.57□□□□□ -2
HMGB3P23-201ENST00000414981 LINC00322Q6ZN03 302 aaPredicted RBP2.57□□□□□ -2
HMGB3P23-201ENST00000414981 ZNF826PQ6ZT77 177 aa2.57□□□□□ -2
HMGB3P23-201ENST00000414981 LINC00173Q6ZV60 143 aa2.57□□□□□ -2
HMGB3P23-201ENST00000414981 AMN1Q8IY45 258 aa2.57□□□□□ -2
HMGB3P23-201ENST00000414981 ANKRD29Q8N6D5 301 aa2.57□□□□□ -2
HMGB3P23-201ENST00000414981 LY6G5BQ8NDX9 201 aa2.57□□□□□ -2
HMGB3P23-201ENST00000414981 UBALD1Q8TB05 177 aa2.57□□□□□ -2
HMGB3P23-201ENST00000414981 TMEM158Q8WZ71 300 aa2.57□□□□□ -2
HMGB3P23-201ENST00000414981 LINC01587Q99440 93 aa2.57□□□□□ -2
HMGB3P23-201ENST00000414981 NAA38Q9BRA0 125 aaKnown RBP2.57□□□□□ -2
HMGB3P23-201ENST00000414981 SHANK2-AS3Q9BTD1 123 aa2.57□□□□□ -2
HMGB3P23-201ENST00000414981 CHAC1Q9BUX1 264 aa2.57□□□□□ -2
HMGB3P23-201ENST00000414981 TMEM133Q9H2Q1 129 aa2.57□□□□□ -2
HMGB3P23-201ENST00000414981 PRO0461Q9UI25 63 aa2.57□□□□□ -2
HMGB3P23-201ENST00000414981 HHLA3Q9XRX5 114 aa2.57□□□□□ -2
HMGB3P23-201ENST00000414981 OBSCNQ5VST9 7968 aa2.57□□□□□ -2
HMGB3P23-201ENST00000414981 GON4LQ3T8J9 2241 aa2.57□□□□□ -2
HMGB3P23-201ENST00000414981 ASCC3Q8N3C0 2202 aaKnown RBP2.57□□□□□ -2
HMGB3P23-201ENST00000414981 HTTP42858 3142 aa2.57□□□□□ -2
HMGB3P23-201ENST00000414981 CENPFP49454 3210 aa2.57□□□□□ -2
HMGB3P23-201ENST00000414981 MED12LQ86YW9 2145 aa2.56□□□□□ -2
HMGB3P23-201ENST00000414981 IGHV3OR16-12A0A075B7B8 117 aa2.56□□□□□ -2
HMGB3P23-201ENST00000414981 SMIM26A0A096LP01 95 aa2.56□□□□□ -2
HMGB3P23-201ENST00000414981 TRAV4A0A0B4J268 109 aa2.56□□□□□ -2
HMGB3P23-201ENST00000414981 A0A0J9YXV3 536 aa2.56□□□□□ -2
HMGB3P23-201ENST00000414981 KNCNA6PVL3 124 aa2.56□□□□□ -2
HMGB3P23-201ENST00000414981 D6R8Y8 96 aa2.56□□□□□ -2
HMGB3P23-201ENST00000414981 H3BRN7 92 aa2.56□□□□□ -2
HMGB3P23-201ENST00000414981 RTL8CO15255 209 aa2.56□□□□□ -2
HMGB3P23-201ENST00000414981 PPP1R17O96001 155 aa2.56□□□□□ -2
HMGB3P23-201ENST00000414981 IGLV2-23P01705 113 aa2.56□□□□□ -2
HMGB3P23-201ENST00000414981 TRBV12-3P01733 135 aa2.56□□□□□ -2
HMGB3P23-201ENST00000414981 IGKV1-16P04430 117 aa2.56□□□□□ -2
HMGB3P23-201ENST00000414981 ARMS2P0C7Q2 107 aa2.56□□□□□ -2
HMGB3P23-201ENST00000414981 CECR9P0C854 216 aa2.56□□□□□ -2
HMGB3P23-201ENST00000414981 IGLC6P0CF74 106 aa2.56□□□□□ -2
HMGB3P23-201ENST00000414981 CKS2P33552 79 aa2.56□□□□□ -2
HMGB3P23-201ENST00000414981 IFI27P40305 119 aaPredicted RBP2.56□□□□□ -2
HMGB3P23-201ENST00000414981 RPL27AP46776 148 aaKnown RBP2.56□□□□□ -2
HMGB3P23-201ENST00000414981 REG3AQ06141 175 aa2.56□□□□□ -2
HMGB3P23-201ENST00000414981 LOXL1Q08397 574 aaPredicted RBP2.56□□□□□ -2
HMGB3P23-201ENST00000414981 RRN3P1Q2M238 152 aa2.56□□□□□ -2
HMGB3P23-201ENST00000414981 MRPL51Q4U2R6 128 aaKnown RBP2.56□□□□□ -2
HMGB3P23-201ENST00000414981 PRNTQ86SH4 94 aa2.56□□□□□ -2
HMGB3P23-201ENST00000414981 SBSPONQ8IVN8 264 aa2.56□□□□□ -2
HMGB3P23-201ENST00000414981 DEFB119Q8N690 84 aa2.56□□□□□ -2
HMGB3P23-201ENST00000414981 Q8N8P6 123 aa2.56□□□□□ -2
HMGB3P23-201ENST00000414981 OR8A1Q8NGG7 326 aa2.56□□□□□ -2
HMGB3P23-201ENST00000414981 MYOZ3Q8TDC0 251 aa2.56□□□□□ -2
HMGB3P23-201ENST00000414981 PPDPFLQ8WWR9 84 aa2.56□□□□□ -2
HMGB3P23-201ENST00000414981 ZC2HC1AQ96GY0 325 aa2.56□□□□□ -2
HMGB3P23-201ENST00000414981 GTSF1LQ9H1H1 148 aa2.56□□□□□ -2
HMGB3P23-201ENST00000414981 EDA2RQ9HAV5 297 aa2.56□□□□□ -2
HMGB3P23-201ENST00000414981 KAAG1Q9UBP8 84 aa2.56□□□□□ -2
HMGB3P23-201ENST00000414981 TP73-AS1Q9UF72 201 aa2.56□□□□□ -2
HMGB3P23-201ENST00000414981 F11RQ9Y624 299 aaKnown RBP2.56□□□□□ -2
HMGB3P23-201ENST00000414981 A0A0C4DFX4 3053 aa2.56□□□□□ -2
HMGB3P23-201ENST00000414981 TANC2Q9HCD6 1990 aa2.56□□□□□ -2
HMGB3P23-201ENST00000414981 TET2Q6N021 2002 aaPredicted RBP2.56□□□□□ -2
HMGB3P23-201ENST00000414981 DYSFO75923 2080 aa2.56□□□□□ -2
HMGB3P23-201ENST00000414981 ESPL1Q14674 2120 aa2.56□□□□□ -2
HMGB3P23-201ENST00000414981 CACNA1DQ01668 2161 aa2.56□□□□□ -2
HMGB3P23-201ENST00000414981 ASXL3Q9C0F0 2248 aa2.56□□□□□ -2
HMGB3P23-201ENST00000414981 TRBV7-3A0A075B6L6 115 aa2.55□□□□□ -2
HMGB3P23-201ENST00000414981 TRAV8-3A0A0A6YYJ7 113 aa2.55□□□□□ -2
HMGB3P23-201ENST00000414981 IGHV1-18A0A0C4DH31 117 aa2.55□□□□□ -2
HMGB3P23-201ENST00000414981 MYMXA0A1B0GTQ4 84 aa2.55□□□□□ -2
HMGB3P23-201ENST00000414981 LY6LH3BQJ8 138 aa2.55□□□□□ -2
HMGB3P23-201ENST00000414981 APOMO95445 188 aa2.55□□□□□ -2
HMGB3P23-201ENST00000414981 NCR2O95944 276 aa2.55□□□□□ -2
HMGB3P23-201ENST00000414981 IL4P05112 153 aa2.55□□□□□ -2
HMGB3P23-201ENST00000414981 LINC00694P0DN24 101 aa2.55□□□□□ -2
HMGB3P23-201ENST00000414981 CCL4P13236 92 aa2.55□□□□□ -2
HMGB3P23-201ENST00000414981 NMUP48645 174 aa2.55□□□□□ -2
HMGB3P23-201ENST00000414981 ZNF138P52744 262 aa2.55□□□□□ -2
HMGB3P23-201ENST00000414981 FXYD2P54710 66 aa2.55□□□□□ -2
HMGB3P23-201ENST00000414981 ERCC8Q13216 396 aa2.55□□□□□ -2
HMGB3P23-201ENST00000414981 CACNA1EQ15878 2313 aa2.55□□□□□ -2
HMGB3P23-201ENST00000414981 C6orf99Q4VX62 202 aa2.55□□□□□ -2
HMGB3P23-201ENST00000414981 ORMDL2Q53FV1 153 aa2.55□□□□□ -2
HMGB3P23-201ENST00000414981 CFAP126Q5VTH2 177 aa2.55□□□□□ -2
HMGB3P23-201ENST00000414981 LYZL1Q6UWQ5 148 aa2.55□□□□□ -2
HMGB3P23-201ENST00000414981 TEN1Q86WV5 123 aa2.55□□□□□ -2
HMGB3P23-201ENST00000414981 GAFA1Q96PS6 74 aa2.55□□□□□ -2
HMGB3P23-201ENST00000414981 PRADC1Q9BSG0 188 aa2.55□□□□□ -2
HMGB3P23-201ENST00000414981 MRPL20Q9BYC9 149 aaKnown RBP2.55□□□□□ -2
HMGB3P23-201ENST00000414981 LENEPQ9Y5L5 61 aa2.55□□□□□ -2
HMGB3P23-201ENST00000414981 SLC25A15Q9Y619 301 aa2.55□□□□□ -2
HMGB3P23-201ENST00000414981 ATRXP46100 2492 aa2.54□□□□□ -2
HMGB3P23-201ENST00000414981 KNL1Q8NG31 2342 aa2.54□□□□□ -2
HMGB3P23-201ENST00000414981 MED12Q93074 2177 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms