RNA–Protein interactions for RNA: ENST00000413553.1

SIK3-202, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-202ENST00000413553 PRO1854Q9UHT4 67 aa6.75□□□□□ -1.33
SIK3-202ENST00000413553 IGLV4-69A0A075B6H9 119 aa6.75□□□□□ -1.33
SIK3-202ENST00000413553 TRAV21A0A0B4J279 112 aa6.75□□□□□ -1.33
SIK3-202ENST00000413553 M0R1W7 72 aa6.75□□□□□ -1.33
SIK3-202ENST00000413553 IGHV3-30P01768 117 aa6.75□□□□□ -1.33
SIK3-202ENST00000413553 IGHV3-30-5P0DP03 117 aa6.75□□□□□ -1.33
SIK3-202ENST00000413553 TSPEAR-AS2P59090 65 aa6.75□□□□□ -1.33
SIK3-202ENST00000413553 ANXA2RQ3ZCQ2 193 aa6.75□□□□□ -1.33
SIK3-202ENST00000413553 Q8N6K4 173 aa6.75□□□□□ -1.33
SIK3-202ENST00000413553 BPESC1Q9GZL8 116 aa6.75□□□□□ -1.33
SIK3-202ENST00000413553 POLQO75417 2590 aa6.74□□□□□ -1.33
SIK3-202ENST00000413553 B5MCH6 92 aa6.74□□□□□ -1.33
SIK3-202ENST00000413553 RNF223E7ERA6 249 aa6.74□□□□□ -1.33
SIK3-202ENST00000413553 ATP5J2P56134 94 aa6.74□□□□□ -1.33
SIK3-202ENST00000413553 RPL39P62891 51 aaKnown RBP6.74□□□□□ -1.33
SIK3-202ENST00000413553 PAPPA-AS1Q5QFB9 102 aa6.74□□□□□ -1.33
SIK3-202ENST00000413553 EEF1AKMT3Q96AZ1 226 aa6.74□□□□□ -1.33
SIK3-202ENST00000413553 PTPN13Q12923 2485 aa6.74□□□□□ -1.33
SIK3-202ENST00000413553 LGALS3P17931 250 aaKnown RBP6.74□□□□□ -1.33
SIK3-202ENST00000413553 RNASE4P34096 147 aaKnown RBP6.74□□□□□ -1.33
SIK3-202ENST00000413553 PMVKQ15126 192 aa6.74□□□□□ -1.33
SIK3-202ENST00000413553 Q1RN00 199 aa6.74□□□□□ -1.33
SIK3-202ENST00000413553 TRPT1Q86TN4 253 aaKnown RBP6.74□□□□□ -1.33
SIK3-202ENST00000413553 OR10J6PQ8NGY7 276 aa6.74□□□□□ -1.33
SIK3-202ENST00000413553 C20orf173Q96LM9 149 aa6.74□□□□□ -1.33
SIK3-202ENST00000413553 VPS13CQ709C8 3753 aa6.73□□□□□ -1.33
SIK3-202ENST00000413553 DOPEY2Q9Y3R5 2298 aa6.73□□□□□ -1.33
SIK3-202ENST00000413553 USP9YO00507 2555 aaPredicted RBP6.73□□□□□ -1.33
SIK3-202ENST00000413553 GNRH2O43555 120 aa6.73□□□□□ -1.33
SIK3-202ENST00000413553 SNCGO76070 127 aa6.73□□□□□ -1.33
SIK3-202ENST00000413553 GAGE5Q13069 117 aa6.73□□□□□ -1.33
SIK3-202ENST00000413553 GAGE6Q13070 117 aa6.73□□□□□ -1.33
SIK3-202ENST00000413553 IGKV3-7A0A075B6H7 116 aa6.73□□□□□ -1.33
SIK3-202ENST00000413553 TSHBP01222 138 aa6.73□□□□□ -1.33
SIK3-202ENST00000413553 CRIP2P52943 208 aaPredicted RBP6.73□□□□□ -1.33
SIK3-202ENST00000413553 RPL11P62913 178 aaKnown RBP6.73□□□□□ -1.33
SIK3-202ENST00000413553 C9orf139Q6ZV77 190 aa6.73□□□□□ -1.33
SIK3-202ENST00000413553 SBSPONQ8IVN8 264 aa6.73□□□□□ -1.33
SIK3-202ENST00000413553 SLC25A29Q8N8R3 303 aa6.73□□□□□ -1.33
SIK3-202ENST00000413553 MUC4Q99102 2169 aa6.73□□□□□ -1.33
SIK3-202ENST00000413553 ABCA12Q86UK0 2595 aa6.73□□□□□ -1.33
SIK3-202ENST00000413553 A4D1N5 150 aa6.73□□□□□ -1.33
SIK3-202ENST00000413553 F5H697 171 aa6.73□□□□□ -1.33
SIK3-202ENST00000413553 PPP1R17O96001 155 aa6.73□□□□□ -1.33
SIK3-202ENST00000413553 ZFAND2AQ8N6M9 145 aa6.73□□□□□ -1.33
SIK3-202ENST00000413553 NRGNQ92686 78 aa6.73□□□□□ -1.33
SIK3-202ENST00000413553 UBR5O95071 2799 aaPredicted RBP6.72□□□□□ -1.33
SIK3-202ENST00000413553 IGHV3-64A0A075B6Q5 118 aa6.72□□□□□ -1.33
SIK3-202ENST00000413553 TRAV2A0A0B4J234 112 aa6.72□□□□□ -1.33
SIK3-202ENST00000413553 J3QQQ9 107 aa6.72□□□□□ -1.33
SIK3-202ENST00000413553 IGHV4-39P01824 125 aa6.72□□□□□ -1.33
SIK3-202ENST00000413553 GAGE2BQ13066 116 aa6.72□□□□□ -1.33
SIK3-202ENST00000413553 GAGE2EQ4V326 116 aa6.72□□□□□ -1.33
SIK3-202ENST00000413553 GAGE2DQ9UEU5 116 aa6.72□□□□□ -1.33
SIK3-202ENST00000413553 CELSR2Q9HCU4 2923 aa6.72□□□□□ -1.33
SIK3-202ENST00000413553 CSMD2Q7Z408 3487 aa6.72□□□□□ -1.33
SIK3-202ENST00000413553 IGHV1-69DA0A0B4J2H0 117 aa6.72□□□□□ -1.33
SIK3-202ENST00000413553 F6UB75 175 aa6.72□□□□□ -1.33
SIK3-202ENST00000413553 EBI3Q14213 229 aa6.72□□□□□ -1.33
SIK3-202ENST00000413553 NTN5Q8WTR8 489 aaPredicted RBP6.72□□□□□ -1.33
SIK3-202ENST00000413553 LINC00477Q96M19 166 aa6.72□□□□□ -1.33
SIK3-202ENST00000413553 BEX4Q9NWD9 120 aaPredicted RBP6.72□□□□□ -1.33
SIK3-202ENST00000413553 LENEPQ9Y5L5 61 aa6.72□□□□□ -1.33
SIK3-202ENST00000413553 CENPVL3A0A0U1RRI6 287 aa6.71□□□□□ -1.33
SIK3-202ENST00000413553 OOSP1A8MZH6 123 aa6.71□□□□□ -1.33
SIK3-202ENST00000413553 GPHB5Q86YW7 130 aa6.71□□□□□ -1.33
SIK3-202ENST00000413553 PIMREGQ9BSJ6 248 aa6.71□□□□□ -1.33
SIK3-202ENST00000413553 CELSR1Q9NYQ6 3014 aa6.71□□□□□ -1.34
SIK3-202ENST00000413553 A0A087WWL8 130 aa6.71□□□□□ -1.34
SIK3-202ENST00000413553 IGIPA6NJ69 53 aa6.71□□□□□ -1.34
SIK3-202ENST00000413553 MINOS1Q5TGZ0 78 aa6.71□□□□□ -1.34
SIK3-202ENST00000413553 ZNRF2Q8NHG8 242 aa6.71□□□□□ -1.34
SIK3-202ENST00000413553 LINC00527Q9UJ94 153 aa6.71□□□□□ -1.34
SIK3-202ENST00000413553 MINOS1-NBL1R4GNA1 71 aa6.71□□□□□ -1.34
SIK3-202ENST00000413553 ANKRD17O75179 2603 aaKnown RBP6.71□□□□□ -1.34
SIK3-202ENST00000413553 TRBV7-1A0A0A6YYK4 115 aa6.7□□□□□ -1.34
SIK3-202ENST00000413553 TRAV4A0A0B4J268 109 aa6.7□□□□□ -1.34
SIK3-202ENST00000413553 TTC32Q5I0X7 151 aa6.7□□□□□ -1.34
SIK3-202ENST00000413553 AJUBAQ96IF1 538 aa6.7□□□□□ -1.34
SIK3-202ENST00000413553 CITED1Q99966 193 aa6.7□□□□□ -1.34
SIK3-202ENST00000413553 JPT2Q9H910 190 aa6.7□□□□□ -1.34
SIK3-202ENST00000413553 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.7□□□□□ -1.342e-6■■■■□ 24.4
SIK3-202ENST00000413553 NAV2Q8IVL1 2488 aa6.7□□□□□ -1.34
SIK3-202ENST00000413553 RNASE3P12724 160 aaKnown RBP6.7□□□□□ -1.34
SIK3-202ENST00000413553 ZFP36P26651 326 aaKnown RBP6.7□□□□□ -1.34
SIK3-202ENST00000413553 FAM74A4Q5TZK3 123 aa6.7□□□□□ -1.34
SIK3-202ENST00000413553 ZNF256Q9Y2P7 627 aaPredicted RBP6.7□□□□□ -1.34
SIK3-202ENST00000413553 SDHAF1A6NFY7 115 aa6.7□□□□□ -1.34
SIK3-202ENST00000413553 OVOL1O14753 267 aa6.7□□□□□ -1.34
SIK3-202ENST00000413553 IGHV3-33P01772 117 aa6.7□□□□□ -1.34
SIK3-202ENST00000413553 SUMO4Q6EEV6 95 aa6.7□□□□□ -1.34
SIK3-202ENST00000413553 TMEM141Q96I45 108 aa6.7□□□□□ -1.34
SIK3-202ENST00000413553 RHODO00212 210 aa6.69□□□□□ -1.34
SIK3-202ENST00000413553 CRLF1O75462 422 aa6.69□□□□□ -1.34
SIK3-202ENST00000413553 NDUFV3P56181 108 aaKnown RBP6.69□□□□□ -1.34
SIK3-202ENST00000413553 U3KQE9 123 aa6.69□□□□□ -1.34
SIK3-202ENST00000413553 HELZ2Q9BYK8 2649 aaKnown RBP6.69□□□□□ -1.34
SIK3-202ENST00000413553 VCYO14598 125 aa6.69□□□□□ -1.34
SIK3-202ENST00000413553 NHLRC4P0CG21 123 aaPredicted RBP6.69□□□□□ -1.34
SIK3-202ENST00000413553 SRD5A1P18405 259 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms