RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 BPESC1Q9GZL8 116 aa3.52□□□□□ -1.85
PTPN13-202ENST00000411767 SMAD5-AS1Q9Y6J3 95 aa3.52□□□□□ -1.85
PTPN13-202ENST00000411767 KIAA2026Q5HYC2 2103 aa3.52□□□□□ -1.85
PTPN13-202ENST00000411767 ZNF672Q499Z4 452 aaPredicted RBP3.52□□□□□ -1.85
PTPN13-202ENST00000411767 KNL1Q8NG31 2342 aa3.52□□□□□ -1.85
PTPN13-202ENST00000411767 CHD5Q8TDI0 1954 aa3.52□□□□□ -1.85
PTPN13-202ENST00000411767 NCKAP5O14513 1909 aa3.52□□□□□ -1.85
PTPN13-202ENST00000411767 ANK1P16157 1881 aa3.52□□□□□ -1.85
PTPN13-202ENST00000411767 DDX60Q8IY21 1712 aaKnown RBP3.52□□□□□ -1.85
PTPN13-202ENST00000411767 RREB1Q92766 1687 aa3.52□□□□□ -1.85
PTPN13-202ENST00000411767 AHDC1Q5TGY3 1603 aaPredicted RBP3.52□□□□□ -1.85
PTPN13-202ENST00000411767 A0A0J9YXV3 536 aa3.52□□□□□ -1.85
PTPN13-202ENST00000411767 AKAP11Q9UKA4 1901 aa3.52□□□□□ -1.85
PTPN13-202ENST00000411767 SLPIP03973 132 aa3.52□□□□□ -1.85
PTPN13-202ENST00000411767 CD24P25063 80 aa3.52□□□□□ -1.85
PTPN13-202ENST00000411767 UQCR11O14957 56 aa3.52□□□□□ -1.85
PTPN13-202ENST00000411767 FAM27E3Q08E93 113 aa3.52□□□□□ -1.85
PTPN13-202ENST00000411767 PRO0255Q9UI72 69 aa3.52□□□□□ -1.85
PTPN13-202ENST00000411767 SNED1Q8TER0 1413 aa3.51□□□□□ -1.85
PTPN13-202ENST00000411767 CCL24O00175 119 aa3.51□□□□□ -1.85
PTPN13-202ENST00000411767 C11orf45Q8TAV5 145 aa3.51□□□□□ -1.85
PTPN13-202ENST00000411767 CYP4F30PQ9H0H9 118 aa3.51□□□□□ -1.85
PTPN13-202ENST00000411767 C6orf48Q9UBA6 75 aa3.51□□□□□ -1.85
PTPN13-202ENST00000411767 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.51□□□□□ -1.85
PTPN13-202ENST00000411767 NWD2Q9ULI1 1742 aa3.51□□□□□ -1.85
PTPN13-202ENST00000411767 AVPP01185 164 aa3.51□□□□□ -1.85
PTPN13-202ENST00000411767 PCOTHQ58A44 107 aa3.51□□□□□ -1.85
PTPN13-202ENST00000411767 LINC00575Q6W349 94 aa3.51□□□□□ -1.85
PTPN13-202ENST00000411767 LINC00308Q8TCZ7 52 aa3.51□□□□□ -1.85
PTPN13-202ENST00000411767 ESPL1Q14674 2120 aa3.51□□□□□ -1.85
PTPN13-202ENST00000411767 KIAA1217Q5T5P2 1943 aa3.51□□□□□ -1.85
PTPN13-202ENST00000411767 CDK5RAP2Q96SN8 1893 aa3.51□□□□□ -1.85
PTPN13-202ENST00000411767 NRAPQ86VF7 1730 aa3.51□□□□□ -1.85
PTPN13-202ENST00000411767 ELOF1P60002 83 aaKnown RBP3.51□□□□□ -1.85
PTPN13-202ENST00000411767 HCG22E2RYF7 251 aa3.51□□□□□ -1.85
PTPN13-202ENST00000411767 REG3AQ06141 175 aa3.51□□□□□ -1.85
PTPN13-202ENST00000411767 CIRBP-AS1Q8TBR5 109 aa3.51□□□□□ -1.85
PTPN13-202ENST00000411767 LAMB2P55268 1798 aa3.51□□□□□ -1.85
PTPN13-202ENST00000411767 SHROOM3Q8TF72 1996 aa3.51□□□□□ -1.85
PTPN13-202ENST00000411767 ARAP2Q8WZ64 1704 aa3.51□□□□□ -1.85
PTPN13-202ENST00000411767 SCN5AQ14524 2016 aa3.5□□□□□ -1.85
PTPN13-202ENST00000411767 ZFAND2AQ8N6M9 145 aa3.5□□□□□ -1.85
PTPN13-202ENST00000411767 TNRC6BQ9UPQ9 1833 aaKnown RBP3.5□□□□□ -1.85
PTPN13-202ENST00000411767 COL16A1Q07092 1604 aaPredicted RBP3.5□□□□□ -1.85
PTPN13-202ENST00000411767 EPM2AB3EWF7 344 aa3.5□□□□□ -1.85
PTPN13-202ENST00000411767 LINC01547P58512 204 aaPredicted RBP3.5□□□□□ -1.85
PTPN13-202ENST00000411767 SYCNQ0VAF6 134 aa3.5□□□□□ -1.85
PTPN13-202ENST00000411767 EIF4EBP1Q13541 118 aaPredicted RBP3.5□□□□□ -1.85
PTPN13-202ENST00000411767 LCA10Q71F78 164 aa3.5□□□□□ -1.85
PTPN13-202ENST00000411767 MYO16Q9Y6X6 1858 aa3.5□□□□□ -1.85
PTPN13-202ENST00000411767 TRBV6-5A0A0K0K1A5 114 aa3.5□□□□□ -1.85
PTPN13-202ENST00000411767 C4orf51C9J302 202 aa3.5□□□□□ -1.85
PTPN13-202ENST00000411767 VWCEQ96DN2 955 aa3.5□□□□□ -1.85
PTPN13-202ENST00000411767 CDC42SE1Q9NRR8 79 aa3.5□□□□□ -1.85
PTPN13-202ENST00000411767 SCN2AQ99250 2005 aa3.5□□□□□ -1.85
PTPN13-202ENST00000411767 IGKV1-12A0A0C4DH73 117 aa3.5□□□□□ -1.85
PTPN13-202ENST00000411767 PHLPP1O60346 1717 aa3.5□□□□□ -1.85
PTPN13-202ENST00000411767 ATP6V0E1O15342 81 aa3.5□□□□□ -1.85
PTPN13-202ENST00000411767 SPACA3Q8IXA5 215 aa3.5□□□□□ -1.85
PTPN13-202ENST00000411767 NRGNQ92686 78 aa3.5□□□□□ -1.85
PTPN13-202ENST00000411767 LOC100131303A0A0U1RQF7 123 aa3.5□□□□□ -1.85
PTPN13-202ENST00000411767 IGFL4Q6B9Z1 124 aa3.5□□□□□ -1.85
PTPN13-202ENST00000411767 KIF13BQ9NQT8 1826 aa3.5□□□□□ -1.85
PTPN13-202ENST00000411767 IGLV4-69A0A075B6H9 119 aa3.49□□□□□ -1.85
PTPN13-202ENST00000411767 IGLV7-43P04211 117 aa3.49□□□□□ -1.85
PTPN13-202ENST00000411767 SLURP1P55000 103 aa3.49□□□□□ -1.85
PTPN13-202ENST00000411767 XGP55808 180 aa3.49□□□□□ -1.85
PTPN13-202ENST00000411767 C1orf64Q8NEQ6 169 aa3.49□□□□□ -1.85
PTPN13-202ENST00000411767 CDIP1Q9H305 208 aa3.49□□□□□ -1.85
PTPN13-202ENST00000411767 DOCK8Q8NF50 2099 aa3.49□□□□□ -1.85
PTPN13-202ENST00000411767 DNAJC13O75165 2243 aa3.49□□□□□ -1.85
PTPN13-202ENST00000411767 SSC5DA1L4H1 1573 aa3.49□□□□□ -1.85
PTPN13-202ENST00000411767 C6orf223Q8N319 242 aa3.49□□□□□ -1.85
PTPN13-202ENST00000411767 DOCK2Q92608 1830 aa3.49□□□□□ -1.85
PTPN13-202ENST00000411767 PDE4DIPQ5VU43 2346 aa3.49□□□□□ -1.85
PTPN13-202ENST00000411767 GNRH2O43555 120 aa3.49□□□□□ -1.85
PTPN13-202ENST00000411767 IGHV1-46P01743 117 aa3.49□□□□□ -1.85
PTPN13-202ENST00000411767 C17orf82Q86X59 251 aaPredicted RBP3.49□□□□□ -1.85
PTPN13-202ENST00000411767 LRP5O75197 1615 aa3.49□□□□□ -1.85
PTPN13-202ENST00000411767 MYO5AQ9Y4I1 1855 aaKnown RBP3.49□□□□□ -1.85
PTPN13-202ENST00000411767 SRRM5B3KS81 715 aa3.49□□□□□ -1.85
PTPN13-202ENST00000411767 C11orf71Q6IPW1 123 aa3.49□□□□□ -1.85
PTPN13-202ENST00000411767 A0A1B0GUL6 1792 aa3.49□□□□□ -1.85
PTPN13-202ENST00000411767 LDLRAD1Q5T700 205 aa3.49□□□□□ -1.85
PTPN13-202ENST00000411767 A0A1B0GW54 56 aa3.49□□□□□ -1.85
PTPN13-202ENST00000411767 COL5A3P25940 1745 aaPredicted RBP3.49□□□□□ -1.85
PTPN13-202ENST00000411767 F8WDY8 70 aa3.49□□□□□ -1.85
PTPN13-202ENST00000411767 B3GALT5-AS1P59052 145 aa3.49□□□□□ -1.85
PTPN13-202ENST00000411767 FXYD2P54710 66 aa3.48□□□□□ -1.85
PTPN13-202ENST00000411767 MSMPQ1L6U9 139 aa3.48□□□□□ -1.85
PTPN13-202ENST00000411767 APLNQ9ULZ1 77 aa3.48□□□□□ -1.85
PTPN13-202ENST00000411767 ROBO1Q9Y6N7 1651 aa3.48□□□□□ -1.85
PTPN13-202ENST00000411767 DOT1LQ8TEK3 1739 aa3.48□□□□□ -1.85
PTPN13-202ENST00000411767 SMIM1B2RUZ4 78 aa3.48□□□□□ -1.85
PTPN13-202ENST00000411767 C22orf34Q6ZV56 151 aa3.48□□□□□ -1.85
PTPN13-202ENST00000411767 BCORQ6W2J9 1755 aa3.48□□□□□ -1.85
PTPN13-202ENST00000411767 IGKV2D-30A0A075B6S6 120 aa3.48□□□□□ -1.85
PTPN13-202ENST00000411767 IGKV2-30P06310 120 aa3.48□□□□□ -1.85
PTPN13-202ENST00000411767 LINC01555Q8NAE3 123 aa3.48□□□□□ -1.85
PTPN13-202ENST00000411767 PPDPFQ9H3Y8 114 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms