RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 HIVEP1P15822 2718 aa11.91□□□□□ -0.5
SMARCD1-202ENST00000394963 ARL6IP6Q8N6S5 226 aa11.91□□□□□ -0.5
SMARCD1-202ENST00000394963 CTRLP40313 264 aa11.91□□□□□ -0.5
SMARCD1-202ENST00000394963 ESM1Q9NQ30 184 aa11.91□□□□□ -0.5
SMARCD1-202ENST00000394963 RRN3P1Q2M238 152 aa11.9□□□□□ -0.5
SMARCD1-202ENST00000394963 SDHAF1A6NFY7 115 aa11.9□□□□□ -0.5
SMARCD1-202ENST00000394963 RNF151Q2KHN1 245 aa11.9□□□□□ -0.5
SMARCD1-202ENST00000394963 MRPL35Q9NZE8 188 aaKnown RBP11.9□□□□□ -0.5
SMARCD1-202ENST00000394963 A0A0J9YX75 114 aa11.9□□□□□ -0.51
SMARCD1-202ENST00000394963 RPL39P62891 51 aaKnown RBP11.9□□□□□ -0.51
SMARCD1-202ENST00000394963 U3KQE9 123 aa11.9□□□□□ -0.51
SMARCD1-202ENST00000394963 HTN3P15516 51 aa11.89□□□□□ -0.51
SMARCD1-202ENST00000394963 ANKRD39Q53RE8 183 aa11.89□□□□□ -0.51
SMARCD1-202ENST00000394963 PCP2Q8IVA1 136 aa11.89□□□□□ -0.51
SMARCD1-202ENST00000394963 DCANP1Q8TF63 244 aa11.89□□□□□ -0.51
SMARCD1-202ENST00000394963 PROK1P58294 105 aa11.89□□□□□ -0.51
SMARCD1-202ENST00000394963 SRSF9Q13242 221 aaKnown RBP eCLIP11.89□□□□□ -0.51
SMARCD1-202ENST00000394963 C2orf66Q6UXQ4 117 aa11.89□□□□□ -0.51
SMARCD1-202ENST00000394963 DEFB130BP0DP73 79 aa11.89□□□□□ -0.51
SMARCD1-202ENST00000394963 DEFB130AP0DP74 79 aa11.89□□□□□ -0.51
SMARCD1-202ENST00000394963 NUTF2P61970 127 aaKnown RBP11.88□□□□□ -0.51
SMARCD1-202ENST00000394963 TMEM97Q5BJF2 176 aa11.88□□□□□ -0.51
SMARCD1-202ENST00000394963 RNF185Q96GF1 192 aa11.88□□□□□ -0.51
SMARCD1-202ENST00000394963 TP53TG1Q9Y2A0 90 aa11.88□□□□□ -0.51
SMARCD1-202ENST00000394963 DNLZQ5SXM8 178 aa11.88□□□□□ -0.51
SMARCD1-202ENST00000394963 C20orf144Q9BQM9 153 aa11.88□□□□□ -0.51
SMARCD1-202ENST00000394963 A0A0U1RRA0 63 aa11.87□□□□□ -0.51
SMARCD1-202ENST00000394963 K7EQG2 157 aa11.87□□□□□ -0.51
SMARCD1-202ENST00000394963 TEX29Q8N6K0 151 aa11.87□□□□□ -0.51
SMARCD1-202ENST00000394963 OPRPNQ99935 248 aaPredicted RBP11.87□□□□□ -0.51
SMARCD1-202ENST00000394963 K7EMT4 169 aa11.87□□□□□ -0.51
SMARCD1-202ENST00000394963 ESDP10768 282 aa11.87□□□□□ -0.51
SMARCD1-202ENST00000394963 GATD1Q8NB37 220 aa11.87□□□□□ -0.51
SMARCD1-202ENST00000394963 SMIM2Q9BVW6 85 aa11.87□□□□□ -0.51
SMARCD1-202ENST00000394963 H7C2G1 150 aa11.87□□□□□ -0.51
SMARCD1-202ENST00000394963 ATP5LO75964 103 aa11.87□□□□□ -0.51
SMARCD1-202ENST00000394963 IGKCP01834 107 aa11.87□□□□□ -0.51
SMARCD1-202ENST00000394963 LINC01006Q8NI28 216 aa11.87□□□□□ -0.51
SMARCD1-202ENST00000394963 MRPL53Q96EL3 112 aaKnown RBP11.86□□□□□ -0.51
SMARCD1-202ENST00000394963 KIR2DL5BA0A0G2JN68 375 aa11.86□□□□□ -0.51
SMARCD1-202ENST00000394963 KIR2DL5BA0A0G2JPC4 375 aa11.86□□□□□ -0.51
SMARCD1-202ENST00000394963 TRBV6-1A0A0K0K1D8 114 aa11.86□□□□□ -0.51
SMARCD1-202ENST00000394963 KIR2DL5AQ8N109 375 aa11.86□□□□□ -0.51
SMARCD1-202ENST00000394963 CD5LO43866 347 aa11.85□□□□□ -0.51
SMARCD1-202ENST00000394963 DEFB4AO15263 64 aa11.85□□□□□ -0.51
SMARCD1-202ENST00000394963 DPM2O94777 84 aa11.85□□□□□ -0.51
SMARCD1-202ENST00000394963 Q8N8P6 123 aa11.85□□□□□ -0.51
SMARCD1-202ENST00000394963 CYSLTR1Q9Y271 337 aa11.85□□□□□ -0.51
SMARCD1-202ENST00000394963 SUMO4Q6EEV6 95 aa11.85□□□□□ -0.51
SMARCD1-202ENST00000394963 PSMG3-AS1Q96PY0 264 aa11.85□□□□□ -0.51
SMARCD1-202ENST00000394963 HIST1H4GQ99525 98 aa11.85□□□□□ -0.51
SMARCD1-202ENST00000394963 RNASE3P12724 160 aaKnown RBP11.84□□□□□ -0.51
SMARCD1-202ENST00000394963 OR4C5Q8NGB2 326 aa11.84□□□□□ -0.51
SMARCD1-202ENST00000394963 ATP6V0BQ99437 205 aa11.84□□□□□ -0.51
SMARCD1-202ENST00000394963 CHTOPQ9Y3Y2 248 aaKnown RBP11.84□□□□□ -0.51
SMARCD1-202ENST00000394963 LRRC75A-AS1Q8N1F1 130 aa11.84□□□□□ -0.51
SMARCD1-202ENST00000394963 OR11H2Q8NH07 326 aa11.84□□□□□ -0.51
SMARCD1-202ENST00000394963 GAGE12BA1L429 117 aa11.84□□□□□ -0.51
SMARCD1-202ENST00000394963 GAGE7O76087 117 aa11.84□□□□□ -0.51
SMARCD1-202ENST00000394963 LY6G6DO95868 133 aa11.84□□□□□ -0.51
SMARCD1-202ENST00000394963 GAGE12FP0CL80 117 aa11.84□□□□□ -0.51
SMARCD1-202ENST00000394963 GAGE12GP0CL81 117 aa11.84□□□□□ -0.51
SMARCD1-202ENST00000394963 GAGE12IP0CL82 117 aa11.84□□□□□ -0.51
SMARCD1-202ENST00000394963 ADAMTSL5Q6ZMM2 481 aa11.84□□□□□ -0.51
SMARCD1-202ENST00000394963 FOXI2Q6ZQN5 318 aa11.83□□□□□ -0.51
SMARCD1-202ENST00000394963 TRGV11A0A075B6L2 103 aa11.83□□□□□ -0.52
SMARCD1-202ENST00000394963 A0A096LPF7 62 aa11.83□□□□□ -0.52
SMARCD1-202ENST00000394963 PRSS2P07478 247 aa11.83□□□□□ -0.52
SMARCD1-202ENST00000394963 CEMP1Q6PRD7 247 aaPredicted RBP11.83□□□□□ -0.52
SMARCD1-202ENST00000394963 ZNF493Q6ZR52 646 aa11.83□□□□□ -0.52
SMARCD1-202ENST00000394963 ORMDL2Q53FV1 153 aa11.83□□□□□ -0.52
SMARCD1-202ENST00000394963 Q8N976 141 aa11.82□□□□□ -0.52
SMARCD1-202ENST00000394963 OTOGQ6ZRI0 2925 aa11.82□□□□□ -0.52
SMARCD1-202ENST00000394963 A0A096LNT2 108 aa11.82□□□□□ -0.52
SMARCD1-202ENST00000394963 SAMD13Q5VXD3 122 aa11.82□□□□□ -0.52
SMARCD1-202ENST00000394963 MAP6D1Q9H9H5 199 aa11.82□□□□□ -0.52
SMARCD1-202ENST00000394963 TSSC4Q9Y5U2 329 aaPredicted RBP11.82□□□□□ -0.52
SMARCD1-202ENST00000394963 INSP01308 110 aa11.82□□□□□ -0.52
SMARCD1-202ENST00000394963 NOP10Q9NPE3 64 aaKnown RBP11.82□□□□□ -0.52
SMARCD1-202ENST00000394963 LENEPQ9Y5L5 61 aa11.82□□□□□ -0.52
SMARCD1-202ENST00000394963 C19orf54Q5BKX5 351 aa11.81□□□□□ -0.52
SMARCD1-202ENST00000394963 RASL10AQ92737 203 aa11.81□□□□□ -0.52
SMARCD1-202ENST00000394963 DEFB114Q30KQ6 69 aa11.81□□□□□ -0.52
SMARCD1-202ENST00000394963 NPC2P61916 151 aa11.81□□□□□ -0.52
SMARCD1-202ENST00000394963 C12orf54Q6X4T0 127 aa11.81□□□□□ -0.52
SMARCD1-202ENST00000394963 C4orf3Q8WVX3 66 aa11.81□□□□□ -0.52
SMARCD1-202ENST00000394963 NHP2Q9NX24 153 aaKnown RBP11.81□□□□□ -0.52
SMARCD1-202ENST00000394963 LURAP1LQ8IV03 231 aa11.8□□□□□ -0.52
SMARCD1-202ENST00000394963 GAGE12JA6NER3 117 aa11.8□□□□□ -0.52
SMARCD1-202ENST00000394963 SOCS3O14543 225 aa11.8□□□□□ -0.52
SMARCD1-202ENST00000394963 GAGE1Q13065 139 aa11.8□□□□□ -0.52
SMARCD1-202ENST00000394963 GAGE4Q13068 117 aa11.8□□□□□ -0.52
SMARCD1-202ENST00000394963 GAGE5Q13069 117 aa11.8□□□□□ -0.52
SMARCD1-202ENST00000394963 GAGE13Q4V321 117 aa11.8□□□□□ -0.52
SMARCD1-202ENST00000394963 PRSS29PA6NIE9 313 aa11.8□□□□□ -0.52
SMARCD1-202ENST00000394963 VCYO14598 125 aa11.8□□□□□ -0.52
SMARCD1-202ENST00000394963 ADARB2-AS1A8MUL3 147 aa11.79□□□□□ -0.52
SMARCD1-202ENST00000394963 H3BMM0 161 aa11.79□□□□□ -0.52
SMARCD1-202ENST00000394963 CRIP2P52943 208 aaPredicted RBP11.79□□□□□ -0.52
SMARCD1-202ENST00000394963 ZNF415Q09FC8 603 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms