RNA–Protein interactions for RNA: ENST00000393370.6

PTPA-207, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPA, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-207ENST00000393370 DEFB121Q5J5C9 76 aa12.9□□□□□ -0.35
PTPA-207ENST00000393370 FAM27E3Q08E93 113 aa12.89□□□□□ -0.35
PTPA-207ENST00000393370 SPXQ9BT56 116 aa12.89□□□□□ -0.35
PTPA-207ENST00000393370 ICOSQ9Y6W8 199 aa12.89□□□□□ -0.35
PTPA-207ENST00000393370 NDPQ00604 133 aa12.89□□□□□ -0.35
PTPA-207ENST00000393370 MGAQ8IWI9 3026 aa12.88□□□□□ -0.35
PTPA-207ENST00000393370 UQCRQO14949 82 aa12.88□□□□□ -0.35
PTPA-207ENST00000393370 PHLDA3Q9Y5J5 127 aa12.88□□□□□ -0.35
PTPA-207ENST00000393370 TPRP12270 2363 aaKnown RBP12.88□□□□□ -0.35
PTPA-207ENST00000393370 J3KT08 172 aa12.88□□□□□ -0.35
PTPA-207ENST00000393370 S100A4P26447 101 aaKnown RBP12.88□□□□□ -0.35
PTPA-207ENST00000393370 Q6ZSV7 163 aa12.88□□□□□ -0.35
PTPA-207ENST00000393370 LINC00527Q9UJ94 153 aa12.88□□□□□ -0.35
PTPA-207ENST00000393370 ZNF580Q9UK33 172 aa12.88□□□□□ -0.35
PTPA-207ENST00000393370 LEPROTO15243 131 aa12.87□□□□□ -0.35
PTPA-207ENST00000393370 IGHV3-49A0A0A0MS15 119 aa12.87□□□□□ -0.35
PTPA-207ENST00000393370 A0A0G2JNJ9 132 aa12.87□□□□□ -0.35
PTPA-207ENST00000393370 MBD3L4A6NDZ8 208 aaPredicted RBP12.87□□□□□ -0.35
PTPA-207ENST00000393370 MBD3L3A6NE82 208 aaPredicted RBP12.87□□□□□ -0.35
PTPA-207ENST00000393370 MBD3L5A6NJ08 208 aaPredicted RBP12.87□□□□□ -0.35
PTPA-207ENST00000393370 LY6LH3BQJ8 138 aa12.87□□□□□ -0.35
PTPA-207ENST00000393370 LRRC75A-AS1Q8N1F1 130 aa12.87□□□□□ -0.35
PTPA-207ENST00000393370 MBD3L2Q8NHZ7 208 aaPredicted RBP12.87□□□□□ -0.35
PTPA-207ENST00000393370 TMEM141Q96I45 108 aa12.87□□□□□ -0.35
PTPA-207ENST00000393370 KAAG1Q9UBP8 84 aa12.87□□□□□ -0.35
PTPA-207ENST00000393370 Q9UFV3 132 aa12.87□□□□□ -0.35
PTPA-207ENST00000393370 ARHGAP32A7KAX9 2087 aa12.86□□□□□ -0.35
PTPA-207ENST00000393370 C9orf47Q6ZRZ4 202 aa12.86□□□□□ -0.35
PTPA-207ENST00000393370 LINC00526Q96FQ7 95 aa12.86□□□□□ -0.35
PTPA-207ENST00000393370 OPRPNQ99935 248 aaPredicted RBP12.86□□□□□ -0.35
PTPA-207ENST00000393370 IMUPQ9GZP8 106 aa12.86□□□□□ -0.35
PTPA-207ENST00000393370 SMCR5Q8TEV8 140 aa12.86□□□□□ -0.35
PTPA-207ENST00000393370 TIMM17AQ99595 171 aa12.86□□□□□ -0.35
PTPA-207ENST00000393370 NUP37Q8NFH4 326 aa12.85□□□□□ -0.35
PTPA-207ENST00000393370 EEF1AKMT3Q96AZ1 226 aa12.85□□□□□ -0.35
PTPA-207ENST00000393370 EDA2RQ9HAV5 297 aa12.85□□□□□ -0.35
PTPA-207ENST00000393370 ADARB2-AS1A8MUL3 147 aa12.85□□□□□ -0.35
PTPA-207ENST00000393370 FDCSPQ8NFU4 85 aa12.85□□□□□ -0.35
PTPA-207ENST00000393370 UBTD1Q9HAC8 227 aa12.84□□□□□ -0.35
PTPA-207ENST00000393370 A0A0J9YXY3 114 aa12.84□□□□□ -0.35
PTPA-207ENST00000393370 ZFAND3Q9H8U3 227 aa12.84□□□□□ -0.35
PTPA-207ENST00000393370 PRSS2P07478 247 aa12.83□□□□□ -0.35
PTPA-207ENST00000393370 ZNF883P0CG24 379 aa12.83□□□□□ -0.35
PTPA-207ENST00000393370 POLEQ07864 2286 aa12.83□□□□□ -0.36
PTPA-207ENST00000393370 A0A1B0GX51 115 aa12.83□□□□□ -0.36
PTPA-207ENST00000393370 LST1O00453 97 aa12.83□□□□□ -0.36
PTPA-207ENST00000393370 PPP1R17O96001 155 aa12.83□□□□□ -0.36
PTPA-207ENST00000393370 RP1L1Q8IWN7 2480 aaPredicted RBP12.83□□□□□ -0.36
PTPA-207ENST00000393370 ADGRG4Q8IZF6 3080 aa12.83□□□□□ -0.36
PTPA-207ENST00000393370 COX6CP09669 75 aa12.82□□□□□ -0.36
PTPA-207ENST00000393370 POLR2KP53803 58 aaKnown RBP12.82□□□□□ -0.36
PTPA-207ENST00000393370 NPBQ8NG41 125 aa12.82□□□□□ -0.36
PTPA-207ENST00000393370 LAMA5O15230 3695 aa12.82□□□□□ -0.36
PTPA-207ENST00000393370 TRAV8-3A0A0A6YYJ7 113 aa12.82□□□□□ -0.36
PTPA-207ENST00000393370 TRAV17A0A0B4J275 112 aa12.82□□□□□ -0.36
PTPA-207ENST00000393370 CLPSL1A2RUU4 121 aa12.82□□□□□ -0.36
PTPA-207ENST00000393370 TRAV25A0A0B4J276 109 aa12.82□□□□□ -0.36
PTPA-207ENST00000393370 LITAFQ99732 161 aa12.82□□□□□ -0.36
PTPA-207ENST00000393370 GNRH2O43555 120 aa12.81□□□□□ -0.36
PTPA-207ENST00000393370 ZNF256Q9Y2P7 627 aaPredicted RBP12.81□□□□□ -0.36
PTPA-207ENST00000393370 LINC00315P59091 139 aa12.81□□□□□ -0.36
PTPA-207ENST00000393370 FAM215AQ9Y5M1 114 aa12.81□□□□□ -0.36
PTPA-207ENST00000393370 NPC2P61916 151 aa12.8□□□□□ -0.36
PTPA-207ENST00000393370 SPTBN4Q9H254 2564 aa12.8□□□□□ -0.36
PTPA-207ENST00000393370 SDHAF1A6NFY7 115 aa12.8□□□□□ -0.36
PTPA-207ENST00000393370 I3L3M4 83 aa12.8□□□□□ -0.36
PTPA-207ENST00000393370 CDX4O14627 284 aaPredicted RBP12.8□□□□□ -0.36
PTPA-207ENST00000393370 PF4V1P10720 104 aa12.8□□□□□ -0.36
PTPA-207ENST00000393370 ADAMTSL4-AS1Q5T5F5 129 aa12.8□□□□□ -0.36
PTPA-207ENST00000393370 ZFAND2AQ8N6M9 145 aa12.8□□□□□ -0.36
PTPA-207ENST00000393370 JPT2Q9H910 190 aa12.8□□□□□ -0.36
PTPA-207ENST00000393370 WIPF1O43516 503 aa12.79□□□□□ -0.36
PTPA-207ENST00000393370 TRAV41A0A0B4J266 112 aa12.79□□□□□ -0.36
PTPA-207ENST00000393370 A0A0J9YX75 114 aa12.79□□□□□ -0.36
PTPA-207ENST00000393370 VCYO14598 125 aa12.79□□□□□ -0.36
PTPA-207ENST00000393370 RNASE3P12724 160 aaKnown RBP12.79□□□□□ -0.36
PTPA-207ENST00000393370 IGHV4OR15-8A0A075B7B6 117 aa12.78□□□□□ -0.36
PTPA-207ENST00000393370 A0A087WW49 117 aa12.78□□□□□ -0.36
PTPA-207ENST00000393370 MRPL53Q96EL3 112 aaKnown RBP12.78□□□□□ -0.36
PTPA-207ENST00000393370 KIF25-AS1Q9Y6Z4 181 aa12.78□□□□□ -0.36
PTPA-207ENST00000393370 COX7CP15954 63 aa12.78□□□□□ -0.36
PTPA-207ENST00000393370 DEFB1P60022 68 aa12.78□□□□□ -0.36
PTPA-207ENST00000393370 C15orf32Q32M92 178 aa12.78□□□□□ -0.36
PTPA-207ENST00000393370 SUMO4Q6EEV6 95 aa12.78□□□□□ -0.36
PTPA-207ENST00000393370 GAGE2AQ6NT46 116 aa12.78□□□□□ -0.36
PTPA-207ENST00000393370 TRAV21A0A0B4J279 112 aa12.77□□□□□ -0.36
PTPA-207ENST00000393370 A0A0J9YXV3 536 aa12.77□□□□□ -0.36
PTPA-207ENST00000393370 ACYP1P07311 99 aa12.77□□□□□ -0.36
PTPA-207ENST00000393370 BSPH1Q075Z2 132 aa12.77□□□□□ -0.36
PTPA-207ENST00000393370 LINC00643Q86TS7 51 aa12.77□□□□□ -0.36
PTPA-207ENST00000393370 C20orf173Q96LM9 149 aa12.77□□□□□ -0.36
PTPA-207ENST00000393370 TMEM219Q86XT9 240 aa12.77□□□□□ -0.37
PTPA-207ENST00000393370 C2orf48Q96LS8 159 aa12.77□□□□□ -0.37
PTPA-207ENST00000393370 CYSTM1Q9H1C7 97 aa12.77□□□□□ -0.37
PTPA-207ENST00000393370 LYNX1G3V0Z9 82 aa12.76□□□□□ -0.37
PTPA-207ENST00000393370 LYNX1P0DP58 116 aa12.76□□□□□ -0.37
PTPA-207ENST00000393370 C16orf92Q96LL3 132 aa12.76□□□□□ -0.37
PTPA-207ENST00000393370 DUX5Q96PT3 197 aa12.76□□□□□ -0.37
PTPA-207ENST00000393370 MUC4Q99102 2169 aa12.76□□□□□ -0.37
PTPA-207ENST00000393370 A0A087WWL8 130 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 198.9 ms