RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 H3BUA1 57 aa11.16□□□□□ -0.62
PSME4-201ENST00000389993 CRLF1O75462 422 aa11.16□□□□□ -0.62
PSME4-201ENST00000389993 LAMTOR3Q9UHA4 124 aa11.16□□□□□ -0.62
PSME4-201ENST00000389993 NAV3Q8IVL0 2385 aa11.16□□□□□ -0.62
PSME4-201ENST00000389993 C9JAW5 83 aa11.16□□□□□ -0.62
PSME4-201ENST00000389993 LEPROTO15243 131 aa11.16□□□□□ -0.62
PSME4-201ENST00000389993 CRYGCP07315 174 aa11.16□□□□□ -0.62
PSME4-201ENST00000389993 TMEM61Q8N0U2 210 aa11.16□□□□□ -0.62
PSME4-201ENST00000389993 EML5Q05BV3 1969 aa11.15□□□□□ -0.62
PSME4-201ENST00000389993 ZNF561-AS1K7EIQ3 104 aa11.15□□□□□ -0.62
PSME4-201ENST00000389993 TRAV8-4A0A0B4J246 113 aa11.15□□□□□ -0.62
PSME4-201ENST00000389993 IGHG2P01859 326 aa11.15□□□□□ -0.62
PSME4-201ENST00000389993 IGLC2P0DOY2 106 aa11.15□□□□□ -0.62
PSME4-201ENST00000389993 IGLC3P0DOY3 106 aa11.15□□□□□ -0.62
PSME4-201ENST00000389993 OPRPNQ99935 248 aaPredicted RBP11.15□□□□□ -0.62
PSME4-201ENST00000389993 KRTAP10-9P60411 292 aa11.15□□□□□ -0.63
PSME4-201ENST00000389993 ODF3BA8MYP8 253 aa11.14□□□□□ -0.63
PSME4-201ENST00000389993 ATG2AQ2TAZ0 1938 aa11.14□□□□□ -0.63
PSME4-201ENST00000389993 LINC01549A6NIU2 74 aa11.14□□□□□ -0.63
PSME4-201ENST00000389993 C10orf142B7Z368 130 aa11.14□□□□□ -0.63
PSME4-201ENST00000389993 DAND5Q8N907 189 aa11.14□□□□□ -0.63
PSME4-201ENST00000389993 GYPEP15421 78 aa11.14□□□□□ -0.63
PSME4-201ENST00000389993 CEMP1Q6PRD7 247 aaPredicted RBP11.14□□□□□ -0.63
PSME4-201ENST00000389993 RHODO00212 210 aa11.14□□□□□ -0.63
PSME4-201ENST00000389993 P0C879 139 aa11.14□□□□□ -0.63
PSME4-201ENST00000389993 C20orf173Q96LM9 149 aa11.14□□□□□ -0.63
PSME4-201ENST00000389993 IGHV4-4A0A075B6R2 117 aa11.14□□□□□ -0.63
PSME4-201ENST00000389993 C2orf82Q6UX34 121 aa11.13□□□□□ -0.63
PSME4-201ENST00000389993 TMEM141Q96I45 108 aa11.13□□□□□ -0.63
PSME4-201ENST00000389993 ABCA2Q9BZC7 2435 aa11.13□□□□□ -0.63
PSME4-201ENST00000389993 IGKV2D-24A0A075B6R9 120 aa11.13□□□□□ -0.63
PSME4-201ENST00000389993 DLEU1O43261 78 aa11.13□□□□□ -0.63
PSME4-201ENST00000389993 NDUFA12Q9UI09 145 aa11.13□□□□□ -0.63
PSME4-201ENST00000389993 KLF12Q9Y4X4 402 aa11.13□□□□□ -0.63
PSME4-201ENST00000389993 C11orf71Q6IPW1 123 aa11.12□□□□□ -0.63
PSME4-201ENST00000389993 TNRC6BQ9UPQ9 1833 aaKnown RBP11.12□□□□□ -0.63
PSME4-201ENST00000389993 EIF4EBP1Q13541 118 aaPredicted RBP11.12□□□□□ -0.63
PSME4-201ENST00000389993 AMTNQ6UX39 209 aa11.12□□□□□ -0.63
PSME4-201ENST00000389993 EDN2P20800 178 aa11.12□□□□□ -0.63
PSME4-201ENST00000389993 GDF5OSQ5U4N7 250 aa11.12□□□□□ -0.63
PSME4-201ENST00000389993 ZNF747Q9BV97 191 aa11.11□□□□□ -0.63
PSME4-201ENST00000389993 LOXL1Q08397 574 aaPredicted RBP11.11□□□□□ -0.63
PSME4-201ENST00000389993 COL5A1P20908 1838 aaPredicted RBP11.11□□□□□ -0.63
PSME4-201ENST00000389993 NPSP0C0P6 89 aa11.11□□□□□ -0.63
PSME4-201ENST00000389993 ATXN8Q156A1 80 aa11.11□□□□□ -0.63
PSME4-201ENST00000389993 H3BMM0 161 aa11.11□□□□□ -0.63
PSME4-201ENST00000389993 UBE2WQ96B02 151 aa11.11□□□□□ -0.63
PSME4-201ENST00000389993 TP73-AS1Q9UF72 201 aa11.11□□□□□ -0.63
PSME4-201ENST00000389993 EDA2RQ9HAV5 297 aa11.1□□□□□ -0.63
PSME4-201ENST00000389993 HIST1H4AP62805 103 aaKnown RBP11.1□□□□□ -0.63
PSME4-201ENST00000389993 OCIAD2Q56VL3 154 aa11.1□□□□□ -0.63
PSME4-201ENST00000389993 COX11Q9Y6N1 276 aa11.1□□□□□ -0.63
PSME4-201ENST00000389993 PYGO2Q9BRQ0 406 aa11.1□□□□□ -0.63
PSME4-201ENST00000389993 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.1□□□□□ -0.63
PSME4-201ENST00000389993 RBAKDNA6NC62 111 aa11.1□□□□□ -0.63
PSME4-201ENST00000389993 GTSF1LQ9H1H1 148 aa11.1□□□□□ -0.63
PSME4-201ENST00000389993 LINC00482Q8N8I6 264 aa11.09□□□□□ -0.63
PSME4-201ENST00000389993 F8VRH5 84 aa11.09□□□□□ -0.63
PSME4-201ENST00000389993 C4orf3Q8WVX3 66 aa11.09□□□□□ -0.63
PSME4-201ENST00000389993 SORL1Q92673 2214 aa11.09□□□□□ -0.63
PSME4-201ENST00000389993 PRRC2CQ9Y520 2896 aaKnown RBP11.09□□□□□ -0.63
PSME4-201ENST00000389993 C9orf66Q5T8R8 295 aa11.09□□□□□ -0.63
PSME4-201ENST00000389993 DNAH14Q0VDD8 3507 aa11.09□□□□□ -0.63
PSME4-201ENST00000389993 COX8AP10176 69 aa11.09□□□□□ -0.63
PSME4-201ENST00000389993 FAM110AQ9BQ89 295 aa11.09□□□□□ -0.63
PSME4-201ENST00000389993 LGALS9BQ3B8N2 356 aa11.08□□□□□ -0.64
PSME4-201ENST00000389993 LGALS9CQ6DKI2 356 aa11.08□□□□□ -0.64
PSME4-201ENST00000389993 SPAG8Q99932 426 aaPredicted RBP11.08□□□□□ -0.64
PSME4-201ENST00000389993 J3QQQ9 107 aa11.08□□□□□ -0.64
PSME4-201ENST00000389993 BVES-AS1Q5T3Y7 98 aa11.08□□□□□ -0.64
PSME4-201ENST00000389993 GAGE2AQ6NT46 116 aa11.08□□□□□ -0.64
PSME4-201ENST00000389993 WFDC10AQ9H1F0 79 aa11.08□□□□□ -0.64
PSME4-201ENST00000389993 BPTFQ12830 3046 aa11.08□□□□□ -0.64
PSME4-201ENST00000389993 A0A0J9YXV3 536 aa11.07□□□□□ -0.64
PSME4-201ENST00000389993 RS1O15537 224 aa11.07□□□□□ -0.64
PSME4-201ENST00000389993 TLN1Q9Y490 2541 aaKnown RBP11.07□□□□□ -0.64
PSME4-201ENST00000389993 ANKRD39Q53RE8 183 aa11.07□□□□□ -0.64
PSME4-201ENST00000389993 A0A1W2PPR1 153 aa11.07□□□□□ -0.64
PSME4-201ENST00000389993 AVPP01185 164 aa11.07□□□□□ -0.64
PSME4-201ENST00000389993 CD5LO43866 347 aa11.06□□□□□ -0.64
PSME4-201ENST00000389993 FGF6P10767 208 aa11.06□□□□□ -0.64
PSME4-201ENST00000389993 UBE2V1Q13404 147 aa11.06□□□□□ -0.64
PSME4-201ENST00000389993 CEND1Q8N111 149 aa11.06□□□□□ -0.64
PSME4-201ENST00000389993 Q9H8V8 135 aa11.06□□□□□ -0.64
PSME4-201ENST00000389993 SMAD5-AS1Q9Y6J3 95 aa11.06□□□□□ -0.64
PSME4-201ENST00000389993 ZFP2Q6ZN57 461 aa11.06□□□□□ -0.64
PSME4-201ENST00000389993 C20orf144Q9BQM9 153 aa11.06□□□□□ -0.64
PSME4-201ENST00000389993 MAP6D1Q9H9H5 199 aa11.06□□□□□ -0.64
PSME4-201ENST00000389993 C9orf47Q6ZRZ4 202 aa11.06□□□□□ -0.64
PSME4-201ENST00000389993 ZMAT4Q9H898 229 aa11.06□□□□□ -0.64
PSME4-201ENST00000389993 K7EQD1 137 aa11.06□□□□□ -0.64
PSME4-201ENST00000389993 H3BMG7 143 aa11.06□□□□□ -0.64
PSME4-201ENST00000389993 LY6LH3BQJ8 138 aa11.06□□□□□ -0.64
PSME4-201ENST00000389993 RHOHQ15669 191 aa11.06□□□□□ -0.64
PSME4-201ENST00000389993 CEP295Q9C0D2 2601 aa11.05□□□□□ -0.64
PSME4-201ENST00000389993 KLF5Q13887 457 aaPredicted RBP11.05□□□□□ -0.64
PSME4-201ENST00000389993 TNFRSF13BO14836 293 aaPredicted RBP11.05□□□□□ -0.64
PSME4-201ENST00000389993 Q6YL49 198 aa11.05□□□□□ -0.64
PSME4-201ENST00000389993 IGLV2-8P01709 118 aa11.05□□□□□ -0.64
PSME4-201ENST00000389993 LINC01559Q495D7 138 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms