RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 NAV3Q8IVL0 2385 aa12.37□□□□□ -0.43
PTPRN2-201ENST00000389413 IGHG2P01859 326 aa12.37□□□□□ -0.43
PTPRN2-201ENST00000389413 DEFB130BP0DP73 79 aa12.37□□□□□ -0.43
PTPRN2-201ENST00000389413 DEFB130AP0DP74 79 aa12.37□□□□□ -0.43
PTPRN2-201ENST00000389413 TEX48A0A1B0GUV7 120 aa12.37□□□□□ -0.43
PTPRN2-201ENST00000389413 RNASE13Q5GAN3 156 aaKnown RBP12.37□□□□□ -0.43
PTPRN2-201ENST00000389413 EXPH5Q8NEV8 1989 aa12.36□□□□□ -0.43
PTPRN2-201ENST00000389413 CRIP1P50238 77 aa12.36□□□□□ -0.43
PTPRN2-201ENST00000389413 UNQ9165/PRO28630Q6UXU0 137 aa12.36□□□□□ -0.43
PTPRN2-201ENST00000389413 DEFB1P60022 68 aa12.36□□□□□ -0.43
PTPRN2-201ENST00000389413 HTTP42858 3142 aa12.36□□□□□ -0.43
PTPRN2-201ENST00000389413 S100A7L2Q5SY68 101 aa12.36□□□□□ -0.43
PTPRN2-201ENST00000389413 CFC1BP0CG36 223 aa12.36□□□□□ -0.43
PTPRN2-201ENST00000389413 CFC1P0CG37 223 aa12.36□□□□□ -0.43
PTPRN2-201ENST00000389413 RNF114Q9Y508 228 aa12.36□□□□□ -0.43
PTPRN2-201ENST00000389413 VWC2LB2RUY7 222 aa12.35□□□□□ -0.43
PTPRN2-201ENST00000389413 IGLV2-11P01706 119 aa12.35□□□□□ -0.43
PTPRN2-201ENST00000389413 BAALCQ8WXS3 180 aa12.35□□□□□ -0.43
PTPRN2-201ENST00000389413 TMEM243Q9BU79 118 aa12.35□□□□□ -0.43
PTPRN2-201ENST00000389413 TANC2Q9HCD6 1990 aa12.35□□□□□ -0.43
PTPRN2-201ENST00000389413 CFHR3Q02985 330 aa12.35□□□□□ -0.43
PTPRN2-201ENST00000389413 CSPG4Q6UVK1 2322 aa12.35□□□□□ -0.43
PTPRN2-201ENST00000389413 HERVK_113P63121 156 aa12.35□□□□□ -0.43
PTPRN2-201ENST00000389413 SS18Q15532 418 aa12.35□□□□□ -0.43
PTPRN2-201ENST00000389413 E9PLD3 99 aa12.34□□□□□ -0.43
PTPRN2-201ENST00000389413 LMO4P61968 165 aa12.34□□□□□ -0.43
PTPRN2-201ENST00000389413 UNC80Q8N2C7 3258 aa12.34□□□□□ -0.43
PTPRN2-201ENST00000389413 LINC01548A6NM66 108 aa12.34□□□□□ -0.43
PTPRN2-201ENST00000389413 EBI3Q14213 229 aa12.34□□□□□ -0.43
PTPRN2-201ENST00000389413 GPHB5Q86YW7 130 aa12.34□□□□□ -0.43
PTPRN2-201ENST00000389413 GAGE7O76087 117 aa12.33□□□□□ -0.43
PTPRN2-201ENST00000389413 TRBV12-3P01733 135 aa12.33□□□□□ -0.43
PTPRN2-201ENST00000389413 GAGE12FP0CL80 117 aa12.33□□□□□ -0.43
PTPRN2-201ENST00000389413 GAGE12GP0CL81 117 aa12.33□□□□□ -0.43
PTPRN2-201ENST00000389413 GAGE12IP0CL82 117 aa12.33□□□□□ -0.43
PTPRN2-201ENST00000389413 SH2D6Q7Z4S9 175 aa12.33□□□□□ -0.43
PTPRN2-201ENST00000389413 RPL39P62891 51 aaKnown RBP12.33□□□□□ -0.44
PTPRN2-201ENST00000389413 JPT2Q9H910 190 aa12.33□□□□□ -0.44
PTPRN2-201ENST00000389413 LINC00310P59036 64 aa12.33□□□□□ -0.44
PTPRN2-201ENST00000389413 Q8N1Y9 231 aa12.33□□□□□ -0.44
PTPRN2-201ENST00000389413 TLN1Q9Y490 2541 aaKnown RBP12.33□□□□□ -0.44
PTPRN2-201ENST00000389413 A0A0J9YXV3 536 aa12.32□□□□□ -0.44
PTPRN2-201ENST00000389413 DEFB136Q30KP8 78 aa12.32□□□□□ -0.44
PTPRN2-201ENST00000389413 TIMM17AQ99595 171 aa12.32□□□□□ -0.44
PTPRN2-201ENST00000389413 SPANXA1Q9NS26 97 aa12.32□□□□□ -0.44
PTPRN2-201ENST00000389413 TP73-AS1Q9UF72 201 aa12.32□□□□□ -0.44
PTPRN2-201ENST00000389413 U3KQE9 123 aa12.32□□□□□ -0.44
PTPRN2-201ENST00000389413 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.31□□□□□ -0.44
PTPRN2-201ENST00000389413 IGKV2-29A2NJV5 120 aaPredicted RBP12.31□□□□□ -0.44
PTPRN2-201ENST00000389413 SLURP1P55000 103 aa12.3□□□□□ -0.44
PTPRN2-201ENST00000389413 WFDC2Q14508 124 aa12.3□□□□□ -0.44
PTPRN2-201ENST00000389413 U3KQK5 164 aa12.3□□□□□ -0.44
PTPRN2-201ENST00000389413 C11orf86A6NJI1 115 aa12.29□□□□□ -0.44
PTPRN2-201ENST00000389413 A6NDX4 124 aa12.29□□□□□ -0.44
PTPRN2-201ENST00000389413 GAGE6Q13070 117 aa12.29□□□□□ -0.44
PTPRN2-201ENST00000389413 ZFAND3Q9H8U3 227 aa12.29□□□□□ -0.44
PTPRN2-201ENST00000389413 SMAD5-AS1Q9Y6J3 95 aa12.29□□□□□ -0.44
PTPRN2-201ENST00000389413 GAGE2AQ6NT46 116 aa12.29□□□□□ -0.44
PTPRN2-201ENST00000389413 A4D1N5 150 aa12.29□□□□□ -0.44
PTPRN2-201ENST00000389413 RNF152Q8N8N0 203 aa12.29□□□□□ -0.44
PTPRN2-201ENST00000389413 NTN5Q8WTR8 489 aaPredicted RBP12.29□□□□□ -0.44
PTPRN2-201ENST00000389413 PRSS47A8MTI9 375 aa12.28□□□□□ -0.44
PTPRN2-201ENST00000389413 INAFM2P0DMQ5 153 aa12.28□□□□□ -0.44
PTPRN2-201ENST00000389413 DNAJC30Q96LL9 226 aa12.28□□□□□ -0.44
PTPRN2-201ENST00000389413 CARD19Q96LW7 228 aa12.28□□□□□ -0.44
PTPRN2-201ENST00000389413 IGHV4OR15-8A0A075B7B6 117 aa12.28□□□□□ -0.44
PTPRN2-201ENST00000389413 A0A087WW49 117 aa12.28□□□□□ -0.44
PTPRN2-201ENST00000389413 TMEM89A2RUT3 159 aa12.28□□□□□ -0.44
PTPRN2-201ENST00000389413 PFN2P35080 140 aa12.28□□□□□ -0.44
PTPRN2-201ENST00000389413 SPAG8Q99932 426 aaPredicted RBP12.28□□□□□ -0.44
PTPRN2-201ENST00000389413 APRG1Q8IVJ8 170 aa12.27□□□□□ -0.44
PTPRN2-201ENST00000389413 TNFRSF13BO14836 293 aaPredicted RBP12.27□□□□□ -0.45
PTPRN2-201ENST00000389413 MUSTN1Q8IVN3 82 aa12.27□□□□□ -0.45
PTPRN2-201ENST00000389413 IGF2RP11717 2491 aa12.26□□□□□ -0.45
PTPRN2-201ENST00000389413 A0A0J9YX75 114 aa12.26□□□□□ -0.45
PTPRN2-201ENST00000389413 IGF1P05019 195 aa12.26□□□□□ -0.45
PTPRN2-201ENST00000389413 Q9H8V8 135 aa12.26□□□□□ -0.45
PTPRN2-201ENST00000389413 MDFICQ9P1T7 246 aa12.25□□□□□ -0.45
PTPRN2-201ENST00000389413 RNF185Q96GF1 192 aa12.25□□□□□ -0.45
PTPRN2-201ENST00000389413 C11orf71Q6IPW1 123 aa12.25□□□□□ -0.45
PTPRN2-201ENST00000389413 NOP10Q9NPE3 64 aaKnown RBP12.25□□□□□ -0.45
PTPRN2-201ENST00000389413 IFITM1P13164 125 aa12.24□□□□□ -0.45
PTPRN2-201ENST00000389413 TRAV13-2A0A0B4J235 113 aa12.24□□□□□ -0.45
PTPRN2-201ENST00000389413 NACAE9PAV3 2078 aa12.24□□□□□ -0.45
PTPRN2-201ENST00000389413 CCL24O00175 119 aa12.24□□□□□ -0.45
PTPRN2-201ENST00000389413 Q8N6K4 173 aa12.24□□□□□ -0.45
PTPRN2-201ENST00000389413 LAMTOR3Q9UHA4 124 aa12.24□□□□□ -0.45
PTPRN2-201ENST00000389413 WNK1Q9H4A3 2382 aa12.24□□□□□ -0.45
PTPRN2-201ENST00000389413 DSCAMO60469 2012 aa12.23□□□□□ -0.45
PTPRN2-201ENST00000389413 G3V4G9 280 aa12.23□□□□□ -0.45
PTPRN2-201ENST00000389413 Q8N976 141 aa12.23□□□□□ -0.45
PTPRN2-201ENST00000389413 C20orf203Q8NBC4 194 aa12.23□□□□□ -0.45
PTPRN2-201ENST00000389413 NRGNQ92686 78 aa12.23□□□□□ -0.45
PTPRN2-201ENST00000389413 HIST1H4AP62805 103 aaKnown RBP12.23□□□□□ -0.45
PTPRN2-201ENST00000389413 TEN1Q86WV5 123 aa12.23□□□□□ -0.45
PTPRN2-201ENST00000389413 ANKRD29Q8N6D5 301 aa12.22□□□□□ -0.45
PTPRN2-201ENST00000389413 C20orf173Q96LM9 149 aa12.22□□□□□ -0.45
PTPRN2-201ENST00000389413 PIFOQ8TCI5 191 aa12.22□□□□□ -0.45
PTPRN2-201ENST00000389413 TM2D2Q9BX73 214 aa12.21□□□□□ -0.45
PTPRN2-201ENST00000389413 IGKV2D-26A0A0A0MRZ7 120 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms