RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 VAX2Q9UIW0 290 aa17.68■□□□□ 0.42
NPHP3-202ENST00000383282 IGLV2-11P01706 119 aa17.67■□□□□ 0.42
NPHP3-202ENST00000383282 Q86TA4 180 aa17.67■□□□□ 0.42
NPHP3-202ENST00000383282 PGPEP1LA6NFU8 196 aa17.66■□□□□ 0.42
NPHP3-202ENST00000383282 LYPD6BQ8NI32 183 aa17.66■□□□□ 0.42
NPHP3-202ENST00000383282 PDE6DO43924 150 aa17.65■□□□□ 0.42
NPHP3-202ENST00000383282 S100A9P06702 114 aaKnown RBP17.65■□□□□ 0.42
NPHP3-202ENST00000383282 LAGE3Q14657 143 aa17.65■□□□□ 0.42
NPHP3-202ENST00000383282 TM2D2Q9BX73 214 aa17.65■□□□□ 0.42
NPHP3-202ENST00000383282 RNASE3P12724 160 aaKnown RBP17.64■□□□□ 0.41
NPHP3-202ENST00000383282 S100A4P26447 101 aaKnown RBP17.64■□□□□ 0.41
NPHP3-202ENST00000383282 HAMPP81172 84 aa17.64■□□□□ 0.41
NPHP3-202ENST00000383282 ZFP30Q9Y2G7 519 aa17.63■□□□□ 0.41
NPHP3-202ENST00000383282 DMBT1Q9UGM3 2413 aaPredicted RBP17.62■□□□□ 0.41
NPHP3-202ENST00000383282 RBFOX3A6NFN3 312 aa17.62■□□□□ 0.41
NPHP3-202ENST00000383282 A8MWV9 139 aa17.62■□□□□ 0.41
NPHP3-202ENST00000383282 Q6ZSN1 163 aa17.62■□□□□ 0.41
NPHP3-202ENST00000383282 C11orf52Q96A22 123 aa17.62■□□□□ 0.41
NPHP3-202ENST00000383282 TRBV6-1A0A0K0K1D8 114 aa17.61■□□□□ 0.41
NPHP3-202ENST00000383282 ZFP2Q6ZN57 461 aa17.61■□□□□ 0.41
NPHP3-202ENST00000383282 EIF5A2Q9GZV4 153 aaKnown RBP17.61■□□□□ 0.41
NPHP3-202ENST00000383282 RAB14P61106 215 aa17.6■□□□□ 0.41
NPHP3-202ENST00000383282 TOR2AQ5JU69 321 aa17.6■□□□□ 0.41
NPHP3-202ENST00000383282 PIK3CD-AS1Q5SR53 167 aa17.6■□□□□ 0.41
NPHP3-202ENST00000383282 PARLQ9H300 379 aa17.6■□□□□ 0.41
NPHP3-202ENST00000383282 MED9Q9NWA0 146 aa17.6■□□□□ 0.41
NPHP3-202ENST00000383282 GAGE12JA6NER3 117 aa17.59■□□□□ 0.41
NPHP3-202ENST00000383282 LTAP01374 205 aa17.59■□□□□ 0.41
NPHP3-202ENST00000383282 ASIPP42127 132 aa17.59■□□□□ 0.41
NPHP3-202ENST00000383282 GAGE1Q13065 139 aa17.59■□□□□ 0.41
NPHP3-202ENST00000383282 GAGE4Q13068 117 aa17.59■□□□□ 0.41
NPHP3-202ENST00000383282 GAGE5Q13069 117 aa17.59■□□□□ 0.41
NPHP3-202ENST00000383282 GAGE13Q4V321 117 aa17.59■□□□□ 0.41
NPHP3-202ENST00000383282 RPL35P42766 123 aaKnown RBP17.58■□□□□ 0.4
NPHP3-202ENST00000383282 VPS13BQ7Z7G8 4022 aa17.58■□□□□ 0.4
NPHP3-202ENST00000383282 TRAV8-3A0A0A6YYJ7 113 aa17.57■□□□□ 0.4
NPHP3-202ENST00000383282 IGKV3D-20A0A0C4DH25 116 aa17.57■□□□□ 0.4
NPHP3-202ENST00000383282 FABP5P3A8MUU1 101 aa17.57■□□□□ 0.4
NPHP3-202ENST00000383282 BAGE2Q86Y30 109 aa17.57■□□□□ 0.4
NPHP3-202ENST00000383282 FAM210AQ96ND0 272 aa17.57■□□□□ 0.4
NPHP3-202ENST00000383282 DERL1Q9BUN8 251 aa17.56■□□□□ 0.4
NPHP3-202ENST00000383282 ZC2HC1AQ96GY0 325 aa17.55■□□□□ 0.4
NPHP3-202ENST00000383282 MYCBP2O75592 4640 aa17.55■□□□□ 0.4
NPHP3-202ENST00000383282 A0A087WWC5 75 aa17.54■□□□□ 0.4
NPHP3-202ENST00000383282 LINC00694P0DN24 101 aa17.54■□□□□ 0.4
NPHP3-202ENST00000383282 IL36BQ9NZH7 164 aa17.54■□□□□ 0.4
NPHP3-202ENST00000383282 FAM30AQ9NZY2 134 aa17.54■□□□□ 0.4
NPHP3-202ENST00000383282 GNG4P50150 75 aa17.53■□□□□ 0.4
NPHP3-202ENST00000383282 CEBPGP53567 150 aa17.53■□□□□ 0.4
NPHP3-202ENST00000383282 CENPWQ5EE01 88 aa17.53■□□□□ 0.4
NPHP3-202ENST00000383282 FAM162BQ5T6X4 162 aa17.53■□□□□ 0.4
NPHP3-202ENST00000383282 Q8N3U1 123 aa17.53■□□□□ 0.4
NPHP3-202ENST00000383282 SYT8Q8NBV8 401 aa17.53■□□□□ 0.4
NPHP3-202ENST00000383282 B4DEV8 164 aa17.52■□□□□ 0.4
NPHP3-202ENST00000383282 TMEM250H0YL14 139 aa17.52■□□□□ 0.4
NPHP3-202ENST00000383282 RHODO00212 210 aa17.52■□□□□ 0.4
NPHP3-202ENST00000383282 DAZ4Q86SG3 579 aaKnown RBP17.52■□□□□ 0.4
NPHP3-202ENST00000383282 DAZ3Q9NR90 486 aaKnown RBP17.52■□□□□ 0.4
NPHP3-202ENST00000383282 COX11Q9Y6N1 276 aa17.52■□□□□ 0.4
NPHP3-202ENST00000383282 FLG2Q5D862 2391 aaPredicted RBP17.51■□□□□ 0.39
NPHP3-202ENST00000383282 ZNF674Q2M3X9 581 aa17.51■□□□□ 0.39
NPHP3-202ENST00000383282 COX8CQ7Z4L0 72 aa17.51■□□□□ 0.39
NPHP3-202ENST00000383282 JPT2Q9H910 190 aa17.51■□□□□ 0.39
NPHP3-202ENST00000383282 RAB19A4D1S5 217 aa17.5■□□□□ 0.39
NPHP3-202ENST00000383282 H3BVH4 76 aa17.5■□□□□ 0.39
NPHP3-202ENST00000383282 SH2D1AO60880 128 aa17.5■□□□□ 0.39
NPHP3-202ENST00000383282 WFDC2Q14508 124 aa17.5■□□□□ 0.39
NPHP3-202ENST00000383282 UFSP1Q6NVU6 142 aa17.5■□□□□ 0.39
NPHP3-202ENST00000383282 URGCP-MRPS24S4R325 110 aa17.5■□□□□ 0.39
NPHP3-202ENST00000383282 DMRTA1Q5VZB9 504 aa17.49■□□□□ 0.39
NPHP3-202ENST00000383282 PRR27Q6MZM9 219 aa17.49■□□□□ 0.39
NPHP3-202ENST00000383282 C14orf178Q8N769 122 aaPredicted RBP17.49■□□□□ 0.39
NPHP3-202ENST00000383282 RMI2Q96E14 147 aa17.49■□□□□ 0.39
NPHP3-202ENST00000383282 SAMD10Q9BYL1 202 aa17.49■□□□□ 0.39
NPHP3-202ENST00000383282 LECT2O14960 151 aa17.48■□□□□ 0.39
NPHP3-202ENST00000383282 NDUFS6O75380 124 aaKnown RBP17.48■□□□□ 0.39
NPHP3-202ENST00000383282 PEA15Q15121 130 aa17.48■□□□□ 0.39
NPHP3-202ENST00000383282 SMIM12Q96EX1 92 aa17.48■□□□□ 0.39
NPHP3-202ENST00000383282 MLST8Q9BVC4 326 aa17.48■□□□□ 0.39
NPHP3-202ENST00000383282 SRRM2Q9UQ35 2752 aaKnown RBP17.48■□□□□ 0.39
NPHP3-202ENST00000383282 IGLV2-33A0A075B6J2 118 aaPredicted RBP17.47■□□□□ 0.39
NPHP3-202ENST00000383282 M0R036 132 aa17.47■□□□□ 0.39
NPHP3-202ENST00000383282 PLA2G1BP04054 148 aaKnown RBP17.47■□□□□ 0.39
NPHP3-202ENST00000383282 ARMS2P0C7Q2 107 aa17.47■□□□□ 0.39
NPHP3-202ENST00000383282 IFITM2Q01629 132 aa17.47■□□□□ 0.39
NPHP3-202ENST00000383282 DNLZQ5SXM8 178 aa17.47■□□□□ 0.39
NPHP3-202ENST00000383282 FAM74A4Q5TZK3 123 aa17.47■□□□□ 0.39
NPHP3-202ENST00000383282 DNAH8Q96JB1 4490 aa17.47■□□□□ 0.39
NPHP3-202ENST00000383282 CRIP1P50238 77 aa17.46■□□□□ 0.39
NPHP3-202ENST00000383282 BIN3Q9NQY0 253 aa17.46■□□□□ 0.39
NPHP3-202ENST00000383282 Q9UF83 564 aa17.46■□□□□ 0.39
NPHP3-202ENST00000383282 KRBOX1C9JBD0 128 aa17.45■□□□□ 0.38
NPHP3-202ENST00000383282 CLLU1Q5K131 121 aa17.45■□□□□ 0.38
NPHP3-202ENST00000383282 Q6ZSA8 131 aa17.45■□□□□ 0.38
NPHP3-202ENST00000383282 PHLDA3Q9Y5J5 127 aa17.45■□□□□ 0.38
NPHP3-202ENST00000383282 GRIFINA4D1Z8 144 aa17.44■□□□□ 0.38
NPHP3-202ENST00000383282 J3QL48 77 aa17.44■□□□□ 0.38
NPHP3-202ENST00000383282 SRP19P09132 144 aaKnown RBP17.44■□□□□ 0.38
NPHP3-202ENST00000383282 BAALCQ8WXS3 180 aa17.44■□□□□ 0.38
NPHP3-202ENST00000383282 DAZAP1Q96EP5 407 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms