RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 ZNF295-AS1Q8N0V1 137 aa13.11□□□□□ -0.31
COL4A3BP-203ENST00000380494 AJUBAQ96IF1 538 aa13.11□□□□□ -0.31
COL4A3BP-203ENST00000380494 UPK3BQ9BT76 320 aa13.11□□□□□ -0.31
COL4A3BP-203ENST00000380494 VPREB3Q9UKI3 123 aa13.11□□□□□ -0.31
COL4A3BP-203ENST00000380494 FAM186AA6NE01 2351 aa13.11□□□□□ -0.31
COL4A3BP-203ENST00000380494 MRPL36Q9P0J6 103 aaKnown RBP13.11□□□□□ -0.31
COL4A3BP-203ENST00000380494 PRR30Q53SZ7 412 aaPredicted RBP13.11□□□□□ -0.31
COL4A3BP-203ENST00000380494 IMUPQ9GZP8 106 aa13.11□□□□□ -0.31
COL4A3BP-203ENST00000380494 TEX49A0A1B0GTD5 131 aa13.11□□□□□ -0.31
COL4A3BP-203ENST00000380494 Q6ZQT7 251 aa13.11□□□□□ -0.31
COL4A3BP-203ENST00000380494 C14orf132Q9NPU4 83 aa13.1□□□□□ -0.31
COL4A3BP-203ENST00000380494 ASXL3Q9C0F0 2248 aa13.1□□□□□ -0.31
COL4A3BP-203ENST00000380494 TRBV30A0A0K0K1B3 111 aa13.1□□□□□ -0.31
COL4A3BP-203ENST00000380494 Q8N9W7 124 aa13.1□□□□□ -0.31
COL4A3BP-203ENST00000380494 CHKB-CPT1BH3BT56 60 aa13.1□□□□□ -0.31
COL4A3BP-203ENST00000380494 HIGD2BQ4VC39 106 aa13.1□□□□□ -0.31
COL4A3BP-203ENST00000380494 NDUFB1O75438 58 aa13.1□□□□□ -0.31
COL4A3BP-203ENST00000380494 V9GYY9 64 aa13.1□□□□□ -0.31
COL4A3BP-203ENST00000380494 UBE2BP63146 152 aa13.09□□□□□ -0.31
COL4A3BP-203ENST00000380494 LINC00322Q6ZN03 302 aaPredicted RBP13.09□□□□□ -0.31
COL4A3BP-203ENST00000380494 MIR7-3HGQ8N6C7 128 aa13.09□□□□□ -0.31
COL4A3BP-203ENST00000380494 DIRC1Q969H9 104 aa13.09□□□□□ -0.31
COL4A3BP-203ENST00000380494 CAMK2N2Q96S95 79 aa13.09□□□□□ -0.31
COL4A3BP-203ENST00000380494 NCR3O14931 201 aa13.09□□□□□ -0.31
COL4A3BP-203ENST00000380494 ANAPC1Q9H1A4 1944 aa13.09□□□□□ -0.31
COL4A3BP-203ENST00000380494 C5orf56Q8N8D9 126 aa13.08□□□□□ -0.31
COL4A3BP-203ENST00000380494 E7EUB6 86 aa13.08□□□□□ -0.32
COL4A3BP-203ENST00000380494 IGLV1-47P01700 117 aa13.08□□□□□ -0.32
COL4A3BP-203ENST00000380494 ATP5EP56381 51 aaPredicted RBP13.08□□□□□ -0.32
COL4A3BP-203ENST00000380494 DOCK8Q8NF50 2099 aa13.08□□□□□ -0.32
COL4A3BP-203ENST00000380494 TRBV12-3P01733 135 aa13.08□□□□□ -0.32
COL4A3BP-203ENST00000380494 MYO7BQ6PIF6 2116 aa13.08□□□□□ -0.32
COL4A3BP-203ENST00000380494 WT1P19544 449 aaPredicted RBP13.07□□□□□ -0.32
COL4A3BP-203ENST00000380494 IGHV4-4A0A075B6R2 117 aa13.07□□□□□ -0.32
COL4A3BP-203ENST00000380494 TMEM89A2RUT3 159 aa13.07□□□□□ -0.32
COL4A3BP-203ENST00000380494 COL4A3Q01955 1670 aa13.07□□□□□ -0.32
COL4A3BP-203ENST00000380494 NDUFC2-KCTD14E9PQ53 114 aa13.07□□□□□ -0.32
COL4A3BP-203ENST00000380494 GYPEP15421 78 aa13.07□□□□□ -0.32
COL4A3BP-203ENST00000380494 IGFL2Q6UWQ7 119 aa13.07□□□□□ -0.32
COL4A3BP-203ENST00000380494 AHCTF1Q8WYP5 2266 aa13.07□□□□□ -0.32
COL4A3BP-203ENST00000380494 TMEM223A0PJW6 202 aa13.06□□□□□ -0.32
COL4A3BP-203ENST00000380494 KIAA1671Q9BY89 1806 aa13.06□□□□□ -0.32
COL4A3BP-203ENST00000380494 OBSL1O75147 1896 aa13.06□□□□□ -0.32
COL4A3BP-203ENST00000380494 Q9HAA7 133 aa13.06□□□□□ -0.32
COL4A3BP-203ENST00000380494 IGKV2D-24A0A075B6R9 120 aa13.06□□□□□ -0.32
COL4A3BP-203ENST00000380494 NDUFA1O15239 70 aa13.06□□□□□ -0.32
COL4A3BP-203ENST00000380494 LINC00574Q9H8X3 128 aa13.06□□□□□ -0.32
COL4A3BP-203ENST00000380494 EIF4EBP1Q13541 118 aaPredicted RBP13.06□□□□□ -0.32
COL4A3BP-203ENST00000380494 GPHB5Q86YW7 130 aa13.05□□□□□ -0.32
COL4A3BP-203ENST00000380494 MED12Q93074 2177 aa13.05□□□□□ -0.32
COL4A3BP-203ENST00000380494 NUP210Q8TEM1 1887 aaPredicted RBP13.05□□□□□ -0.32
COL4A3BP-203ENST00000380494 NDUFA7O95182 113 aa13.05□□□□□ -0.32
COL4A3BP-203ENST00000380494 IGHV4-28A0A0C4DH34 117 aa13.05□□□□□ -0.32
COL4A3BP-203ENST00000380494 ODF3Q96PU9 254 aa13.05□□□□□ -0.32
COL4A3BP-203ENST00000380494 TRAV23DV6A0A075B6W5 121 aa13.04□□□□□ -0.32
COL4A3BP-203ENST00000380494 A0A0J9YY99 117 aa13.04□□□□□ -0.32
COL4A3BP-203ENST00000380494 PROP1O75360 226 aa13.04□□□□□ -0.32
COL4A3BP-203ENST00000380494 ZNF80P51504 273 aaPredicted RBP13.04□□□□□ -0.32
COL4A3BP-203ENST00000380494 RPL18AQ02543 176 aaKnown RBP13.04□□□□□ -0.32
COL4A3BP-203ENST00000380494 APRG1Q8IVJ8 170 aa13.04□□□□□ -0.32
COL4A3BP-203ENST00000380494 C2orf91Q6ZV80 131 aa13.04□□□□□ -0.32
COL4A3BP-203ENST00000380494 PRB1P04280 392 aa13.04□□□□□ -0.32
COL4A3BP-203ENST00000380494 DEFB112Q30KQ8 113 aa13.04□□□□□ -0.32
COL4A3BP-203ENST00000380494 DEFB121Q5J5C9 76 aa13.04□□□□□ -0.32
COL4A3BP-203ENST00000380494 TRBV10-1A0A0K0K1A3 114 aa13.03□□□□□ -0.32
COL4A3BP-203ENST00000380494 TP73-AS1Q9UF72 201 aa13.03□□□□□ -0.32
COL4A3BP-203ENST00000380494 SDIM1Q6ZPB5 146 aa13.03□□□□□ -0.32
COL4A3BP-203ENST00000380494 CCL24O00175 119 aa13.02□□□□□ -0.32
COL4A3BP-203ENST00000380494 PLA2G2CQ5R387 149 aa13.02□□□□□ -0.32
COL4A3BP-203ENST00000380494 FAM240AA0A1B0GVK7 77 aa13.02□□□□□ -0.32
COL4A3BP-203ENST00000380494 IGHV4-59P01825 116 aa13.02□□□□□ -0.33
COL4A3BP-203ENST00000380494 BRWD1-AS2P59051 145 aa13.02□□□□□ -0.33
COL4A3BP-203ENST00000380494 CFAP126Q5VTH2 177 aa13.02□□□□□ -0.33
COL4A3BP-203ENST00000380494 EML6Q6ZMW3 1958 aa13.01□□□□□ -0.33
COL4A3BP-203ENST00000380494 C20orf197Q8N268 126 aa13.01□□□□□ -0.33
COL4A3BP-203ENST00000380494 PI4KAP42356 2102 aa13.01□□□□□ -0.33
COL4A3BP-203ENST00000380494 HEATR1Q9H583 2144 aaKnown RBP13.01□□□□□ -0.33
COL4A3BP-203ENST00000380494 Q6ZPA2 131 aa13.01□□□□□ -0.33
COL4A3BP-203ENST00000380494 MAPKAPK5-AS1Q8N8E1 139 aa13.01□□□□□ -0.33
COL4A3BP-203ENST00000380494 Q96MF0 132 aa13.01□□□□□ -0.33
COL4A3BP-203ENST00000380494 SP5Q6BEB4 398 aaPredicted RBP13.01□□□□□ -0.33
COL4A3BP-203ENST00000380494 FANCD2OSQ96PS1 177 aa13.01□□□□□ -0.33
COL4A3BP-203ENST00000380494 NDUFC1O43677 76 aa13.01□□□□□ -0.33
COL4A3BP-203ENST00000380494 TRIAP1O43715 76 aa13.01□□□□□ -0.33
COL4A3BP-203ENST00000380494 SLURP1P55000 103 aa13.01□□□□□ -0.33
COL4A3BP-203ENST00000380494 LRRC75A-AS1Q8N1F1 130 aa13.01□□□□□ -0.33
COL4A3BP-203ENST00000380494 COX7BP24311 80 aa13□□□□□ -0.33
COL4A3BP-203ENST00000380494 CRIP3Q6Q6R5 217 aa13□□□□□ -0.33
COL4A3BP-203ENST00000380494 IGKV2D-26A0A0A0MRZ7 120 aa13□□□□□ -0.33
COL4A3BP-203ENST00000380494 Q6Q795 121 aa12.99□□□□□ -0.33
COL4A3BP-203ENST00000380494 A0A0J9YX75 114 aa12.99□□□□□ -0.33
COL4A3BP-203ENST00000380494 IGHV3-33P01772 117 aa12.99□□□□□ -0.33
COL4A3BP-203ENST00000380494 TNRC6BQ9UPQ9 1833 aaKnown RBP12.99□□□□□ -0.33
COL4A3BP-203ENST00000380494 PTPRZ1P23471 2315 aaPredicted RBP12.99□□□□□ -0.33
COL4A3BP-203ENST00000380494 TIRAPP58753 221 aa12.99□□□□□ -0.33
COL4A3BP-203ENST00000380494 MRPL55Q7Z7F7 128 aaKnown RBP12.99□□□□□ -0.33
COL4A3BP-203ENST00000380494 SERP2Q8N6R1 65 aa12.99□□□□□ -0.33
COL4A3BP-203ENST00000380494 NCKAP5O14513 1909 aa12.99□□□□□ -0.33
COL4A3BP-203ENST00000380494 ZNF22P17026 224 aaPredicted RBP12.99□□□□□ -0.33
COL4A3BP-203ENST00000380494 MYCNOSP40205 109 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms