RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 NBR2O15453 112 aa11.85□□□□□ -0.51
FXN-201ENST00000377270 ATP5G1P05496 136 aa11.85□□□□□ -0.51
FXN-201ENST00000377270 TMEM190Q8WZ59 177 aa11.85□□□□□ -0.51
FXN-201ENST00000377270 FAM240AA0A1B0GVK7 77 aa11.85□□□□□ -0.51
FXN-201ENST00000377270 M0R1W7 72 aa11.85□□□□□ -0.51
FXN-201ENST00000377270 CFC1BP0CG36 223 aa11.84□□□□□ -0.51
FXN-201ENST00000377270 CFC1P0CG37 223 aa11.84□□□□□ -0.51
FXN-201ENST00000377270 SLC25A16P16260 332 aa11.84□□□□□ -0.51
FXN-201ENST00000377270 LINC01620Q4KN68 170 aa11.84□□□□□ -0.51
FXN-201ENST00000377270 C1orf195Q5TG92 126 aa11.84□□□□□ -0.51
FXN-201ENST00000377270 SPANXDQ9BXN6 97 aa11.84□□□□□ -0.51
FXN-201ENST00000377270 SCGB1D4Q6XE38 83 aa11.84□□□□□ -0.51
FXN-201ENST00000377270 C10orf105Q8TEF2 133 aa11.84□□□□□ -0.51
FXN-201ENST00000377270 PLEKHB2Q96CS7 222 aa11.84□□□□□ -0.51
FXN-201ENST00000377270 IL17RELQ6ZVW7 336 aa11.83□□□□□ -0.52
FXN-201ENST00000377270 C8orf49Q96NF6 230 aa11.83□□□□□ -0.52
FXN-201ENST00000377270 HLA-DMBP28068 263 aa11.83□□□□□ -0.52
FXN-201ENST00000377270 PRORYQ9H606 182 aa11.83□□□□□ -0.52
FXN-201ENST00000377270 TRBV19A0A075B6N1 114 aa11.82□□□□□ -0.52
FXN-201ENST00000377270 A0A1W2PPR1 153 aa11.82□□□□□ -0.52
FXN-201ENST00000377270 ODF3BA8MYP8 253 aa11.82□□□□□ -0.52
FXN-201ENST00000377270 K7EIM0 57 aa11.82□□□□□ -0.52
FXN-201ENST00000377270 NPBQ8NG41 125 aa11.82□□□□□ -0.52
FXN-201ENST00000377270 IGKV1-17P01599 117 aa11.82□□□□□ -0.52
FXN-201ENST00000377270 PRB4P10163 310 aaPredicted RBP11.82□□□□□ -0.52
FXN-201ENST00000377270 C9orf85Q96MD7 179 aa11.82□□□□□ -0.52
FXN-201ENST00000377270 HIVEP3Q5T1R4 2406 aa11.82□□□□□ -0.52
FXN-201ENST00000377270 VMO1Q7Z5L0 202 aa11.81□□□□□ -0.52
FXN-201ENST00000377270 C17orf77Q96MU5 243 aa11.81□□□□□ -0.52
FXN-201ENST00000377270 PRO1854Q9UHT4 67 aa11.81□□□□□ -0.52
FXN-201ENST00000377270 MED13LQ71F56 2210 aa11.81□□□□□ -0.52
FXN-201ENST00000377270 TRBV10-2A0A0K0K1G8 114 aa11.81□□□□□ -0.52
FXN-201ENST00000377270 IGHV4-39P01824 125 aa11.81□□□□□ -0.52
FXN-201ENST00000377270 WNK2Q9Y3S1 2297 aa11.8□□□□□ -0.52
FXN-201ENST00000377270 ZNF815PA8K554 130 aa11.8□□□□□ -0.52
FXN-201ENST00000377270 SH2D1AO60880 128 aa11.8□□□□□ -0.52
FXN-201ENST00000377270 ZFP36P26651 326 aaKnown RBP11.8□□□□□ -0.52
FXN-201ENST00000377270 LINC01600Q96MT4 127 aa11.8□□□□□ -0.52
FXN-201ENST00000377270 S4R3C0 116 aa11.8□□□□□ -0.52
FXN-201ENST00000377270 ATXN8Q156A1 80 aa11.8□□□□□ -0.52
FXN-201ENST00000377270 DYNAPQ8N1N2 210 aa11.8□□□□□ -0.52
FXN-201ENST00000377270 LYPD1Q8N2G4 141 aa11.8□□□□□ -0.52
FXN-201ENST00000377270 ELANEP08246 267 aa11.79□□□□□ -0.52
FXN-201ENST00000377270 PLNP26678 52 aa11.79□□□□□ -0.52
FXN-201ENST00000377270 RNF185Q96GF1 192 aa11.79□□□□□ -0.52
FXN-201ENST00000377270 ASH1LQ9NR48 2969 aaKnown RBP11.79□□□□□ -0.52
FXN-201ENST00000377270 NSUN5P1Q3KNT7 163 aa11.79□□□□□ -0.52
FXN-201ENST00000377270 C2orf82Q6UX34 121 aa11.79□□□□□ -0.52
FXN-201ENST00000377270 Q8N8P6 123 aa11.79□□□□□ -0.52
FXN-201ENST00000377270 IL17DQ8TAD2 202 aa11.79□□□□□ -0.52
FXN-201ENST00000377270 SHANK2-AS3Q9BTD1 123 aa11.79□□□□□ -0.52
FXN-201ENST00000377270 CSMD1Q96PZ7 3565 aa11.79□□□□□ -0.52
FXN-201ENST00000377270 AGPAT4-IT1Q9H0P7 198 aa11.78□□□□□ -0.52
FXN-201ENST00000377270 H7C2G1 150 aa11.78□□□□□ -0.52
FXN-201ENST00000377270 GAS8-AS1O95177 125 aa11.78□□□□□ -0.52
FXN-201ENST00000377270 ITPR1Q14643 2758 aa11.78□□□□□ -0.52
FXN-201ENST00000377270 A0A0U1RQV1 116 aa11.77□□□□□ -0.52
FXN-201ENST00000377270 TMEM170BQ5T4T1 132 aa11.77□□□□□ -0.52
FXN-201ENST00000377270 DPH3P1Q9H4G8 78 aa11.77□□□□□ -0.53
FXN-201ENST00000377270 M0R3E3 92 aa11.76□□□□□ -0.53
FXN-201ENST00000377270 ZNF491Q8N8L2 437 aa11.76□□□□□ -0.53
FXN-201ENST00000377270 AKAP6Q13023 2319 aa11.76□□□□□ -0.53
FXN-201ENST00000377270 SVEP1Q4LDE5 3571 aa11.76□□□□□ -0.53
FXN-201ENST00000377270 FANCD2OSQ96PS1 177 aa11.76□□□□□ -0.53
FXN-201ENST00000377270 METTL26Q96S19 204 aa11.76□□□□□ -0.53
FXN-201ENST00000377270 NDPQ00604 133 aa11.75□□□□□ -0.53
FXN-201ENST00000377270 MSRB1Q9NZV6 116 aa11.75□□□□□ -0.53
FXN-201ENST00000377270 A0A0U1RRA0 63 aa11.75□□□□□ -0.53
FXN-201ENST00000377270 H3BRN7 92 aa11.75□□□□□ -0.53
FXN-201ENST00000377270 P0DMU3 169 aa11.75□□□□□ -0.53
FXN-201ENST00000377270 FAM231AP0DMU4 169 aa11.75□□□□□ -0.53
FXN-201ENST00000377270 FAM231CP0DMU5 169 aa11.75□□□□□ -0.53
FXN-201ENST00000377270 EGR2P11161 476 aaPredicted RBP11.75□□□□□ -0.53
FXN-201ENST00000377270 MINOS1Q5TGZ0 78 aa11.75□□□□□ -0.53
FXN-201ENST00000377270 SMCR5Q8TEV8 140 aa11.75□□□□□ -0.53
FXN-201ENST00000377270 MINOS1-NBL1R4GNA1 71 aa11.75□□□□□ -0.53
FXN-201ENST00000377270 IGLV11-55A0A075B6I3 123 aa11.74□□□□□ -0.53
FXN-201ENST00000377270 ATOX1O00244 68 aa11.74□□□□□ -0.53
FXN-201ENST00000377270 WFDC11Q8NEX6 87 aa11.74□□□□□ -0.53
FXN-201ENST00000377270 Q8N6K4 173 aa11.74□□□□□ -0.53
FXN-201ENST00000377270 IGLV2-18A0A075B6J9 118 aa11.73□□□□□ -0.53
FXN-201ENST00000377270 AVPP01185 164 aa11.73□□□□□ -0.53
FXN-201ENST00000377270 IGHV3-23P01764 117 aa11.73□□□□□ -0.53
FXN-201ENST00000377270 IGHV3-33P01772 117 aa11.73□□□□□ -0.53
FXN-201ENST00000377270 COX8CQ7Z4L0 72 aa11.73□□□□□ -0.53
FXN-201ENST00000377270 ITLN2Q8WWU7 325 aaPredicted RBP11.73□□□□□ -0.53
FXN-201ENST00000377270 GATA1P15976 413 aaPredicted RBP11.73□□□□□ -0.53
FXN-201ENST00000377270 DEFB121Q5J5C9 76 aa11.73□□□□□ -0.53
FXN-201ENST00000377270 LINC01561Q8N1V8 128 aa11.73□□□□□ -0.53
FXN-201ENST00000377270 BEX4Q9NWD9 120 aaPredicted RBP11.73□□□□□ -0.53
FXN-201ENST00000377270 F8VRH5 84 aa11.72□□□□□ -0.53
FXN-201ENST00000377270 LINC00643Q86TS7 51 aa11.72□□□□□ -0.53
FXN-201ENST00000377270 H7C1H1 209 aa11.72□□□□□ -0.53
FXN-201ENST00000377270 C19orf84I3L1E1 186 aa11.72□□□□□ -0.53
FXN-201ENST00000377270 IGHV3-30P01768 117 aa11.72□□□□□ -0.53
FXN-201ENST00000377270 IGHV3-30-5P0DP03 117 aa11.72□□□□□ -0.53
FXN-201ENST00000377270 GNLYP22749 145 aa11.72□□□□□ -0.53
FXN-201ENST00000377270 KLHL30-AS1Q8NEE0 82 aa11.72□□□□□ -0.53
FXN-201ENST00000377270 UPK3BQ9BT76 320 aa11.72□□□□□ -0.53
FXN-201ENST00000377270 CNFNQ9BYD5 112 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms