RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 LINC00527Q9UJ94 153 aa7.28□□□□□ -1.24
LRRC40-201ENST00000370952 PRRC2AP48634 2157 aaKnown RBP7.28□□□□□ -1.24
LRRC40-201ENST00000370952 CENPVL3A0A0U1RRI6 287 aa7.27□□□□□ -1.25
LRRC40-201ENST00000370952 GAGE12JA6NER3 117 aa7.27□□□□□ -1.25
LRRC40-201ENST00000370952 F5H697 171 aa7.27□□□□□ -1.25
LRRC40-201ENST00000370952 GAGE7O76087 117 aa7.27□□□□□ -1.25
LRRC40-201ENST00000370952 GAGE12FP0CL80 117 aa7.27□□□□□ -1.25
LRRC40-201ENST00000370952 GAGE12GP0CL81 117 aa7.27□□□□□ -1.25
LRRC40-201ENST00000370952 GAGE12IP0CL82 117 aa7.27□□□□□ -1.25
LRRC40-201ENST00000370952 RNASE3P12724 160 aaKnown RBP7.27□□□□□ -1.25
LRRC40-201ENST00000370952 GAGE4Q13068 117 aa7.27□□□□□ -1.25
LRRC40-201ENST00000370952 SHISA2Q6UWI4 295 aa7.27□□□□□ -1.25
LRRC40-201ENST00000370952 MUSTN1Q8IVN3 82 aa7.27□□□□□ -1.25
LRRC40-201ENST00000370952 TMEM263Q8WUH6 116 aaKnown RBP7.27□□□□□ -1.25
LRRC40-201ENST00000370952 MRPL53Q96EL3 112 aaKnown RBP7.27□□□□□ -1.25
LRRC40-201ENST00000370952 SPTAN1Q13813 2472 aaKnown RBP7.27□□□□□ -1.25
LRRC40-201ENST00000370952 CELSR1Q9NYQ6 3014 aa7.27□□□□□ -1.25
LRRC40-201ENST00000370952 PAPPA-AS1Q5QFB9 102 aa7.27□□□□□ -1.25
LRRC40-201ENST00000370952 ZNF580Q9UK33 172 aa7.27□□□□□ -1.25
LRRC40-201ENST00000370952 TRBV7-9A0A0J9YWB2 115 aa7.26□□□□□ -1.25
LRRC40-201ENST00000370952 IFITM1P13164 125 aa7.26□□□□□ -1.25
LRRC40-201ENST00000370952 GRNP28799 593 aaKnown RBP7.26□□□□□ -1.25
LRRC40-201ENST00000370952 HERV-K104P63124 156 aa7.26□□□□□ -1.25
LRRC40-201ENST00000370952 PRR30Q53SZ7 412 aaPredicted RBP7.26□□□□□ -1.25
LRRC40-201ENST00000370952 C15orf53Q8NAA6 179 aa7.26□□□□□ -1.25
LRRC40-201ENST00000370952 ZNF256Q9Y2P7 627 aaPredicted RBP7.26□□□□□ -1.25
LRRC40-201ENST00000370952 SORL1Q92673 2214 aa7.26□□□□□ -1.25
LRRC40-201ENST00000370952 LINC01620Q4KN68 170 aa7.26□□□□□ -1.25
LRRC40-201ENST00000370952 SUMO4Q6EEV6 95 aa7.26□□□□□ -1.25
LRRC40-201ENST00000370952 FAM159AQ6UWV7 190 aa7.26□□□□□ -1.25
LRRC40-201ENST00000370952 OR10J6PQ8NGY7 276 aa7.26□□□□□ -1.25
LRRC40-201ENST00000370952 ODF3Q96PU9 254 aa7.26□□□□□ -1.25
LRRC40-201ENST00000370952 IGHV1-69DA0A0B4J2H0 117 aa7.26□□□□□ -1.25
LRRC40-201ENST00000370952 ADARB2-AS1A8MUL3 147 aa7.26□□□□□ -1.25
LRRC40-201ENST00000370952 LINC00315P59091 139 aa7.26□□□□□ -1.25
LRRC40-201ENST00000370952 RPL11P62913 178 aaKnown RBP7.26□□□□□ -1.25
LRRC40-201ENST00000370952 ITLN2Q8WWU7 325 aaPredicted RBP7.26□□□□□ -1.25
LRRC40-201ENST00000370952 EEF1AKMT3Q96AZ1 226 aa7.26□□□□□ -1.25
LRRC40-201ENST00000370952 TRAV8-4A0A0B4J246 113 aa7.25□□□□□ -1.25
LRRC40-201ENST00000370952 SDHAF1A6NFY7 115 aa7.25□□□□□ -1.25
LRRC40-201ENST00000370952 M0R1W7 72 aa7.25□□□□□ -1.25
LRRC40-201ENST00000370952 POLR2KP53803 58 aaKnown RBP7.25□□□□□ -1.25
LRRC40-201ENST00000370952 ZNF876PQ49A33 203 aa7.25□□□□□ -1.25
LRRC40-201ENST00000370952 FAM74A4Q5TZK3 123 aa7.25□□□□□ -1.25
LRRC40-201ENST00000370952 C9orf139Q6ZV77 190 aa7.25□□□□□ -1.25
LRRC40-201ENST00000370952 PIP4P1Q86T03 277 aa7.25□□□□□ -1.25
LRRC40-201ENST00000370952 C3orf56Q8N813 242 aa7.25□□□□□ -1.25
LRRC40-201ENST00000370952 EBI3Q14213 229 aa7.25□□□□□ -1.25
LRRC40-201ENST00000370952 UNQ9165/PRO28630Q6UXU0 137 aa7.25□□□□□ -1.25
LRRC40-201ENST00000370952 KIF25-AS1Q9Y6Z4 181 aa7.25□□□□□ -1.25
LRRC40-201ENST00000370952 U3KQE9 123 aa7.25□□□□□ -1.25
LRRC40-201ENST00000370952 LINC00477Q96M19 166 aa7.24□□□□□ -1.25
LRRC40-201ENST00000370952 TRBV12-3P01733 135 aa7.24□□□□□ -1.25
LRRC40-201ENST00000370952 RPL32P62910 135 aaKnown RBP7.24□□□□□ -1.25
LRRC40-201ENST00000370952 ATXN8Q156A1 80 aa7.24□□□□□ -1.25
LRRC40-201ENST00000370952 VCYO14598 125 aa7.23□□□□□ -1.25
LRRC40-201ENST00000370952 TRIAP1O43715 76 aa7.23□□□□□ -1.25
LRRC40-201ENST00000370952 PPP1R17O96001 155 aa7.23□□□□□ -1.25
LRRC40-201ENST00000370952 ZFP36P26651 326 aaKnown RBP7.23□□□□□ -1.25
LRRC40-201ENST00000370952 TMEM141Q96I45 108 aa7.23□□□□□ -1.25
LRRC40-201ENST00000370952 TIMM17AQ99595 171 aa7.23□□□□□ -1.25
LRRC40-201ENST00000370952 LENEPQ9Y5L5 61 aa7.23□□□□□ -1.25
LRRC40-201ENST00000370952 P0DMU3 169 aa7.23□□□□□ -1.25
LRRC40-201ENST00000370952 FAM231AP0DMU4 169 aa7.23□□□□□ -1.25
LRRC40-201ENST00000370952 FAM231CP0DMU5 169 aa7.23□□□□□ -1.25
LRRC40-201ENST00000370952 NPC2P61916 151 aa7.23□□□□□ -1.25
LRRC40-201ENST00000370952 Q6ZSV7 163 aa7.23□□□□□ -1.25
LRRC40-201ENST00000370952 ZNF292O60281 2723 aa7.23□□□□□ -1.25
LRRC40-201ENST00000370952 CEP295Q9C0D2 2601 aa7.22□□□□□ -1.25
LRRC40-201ENST00000370952 A0A0B4J2C4 111 aa7.22□□□□□ -1.25
LRRC40-201ENST00000370952 TMEM223A0PJW6 202 aa7.22□□□□□ -1.25
LRRC40-201ENST00000370952 H3BMM0 161 aa7.22□□□□□ -1.25
LRRC40-201ENST00000370952 UBE2WQ96B02 151 aa7.22□□□□□ -1.25
LRRC40-201ENST00000370952 IGHV4OR15-8A0A075B7B6 117 aa7.22□□□□□ -1.25
LRRC40-201ENST00000370952 A0A087WW49 117 aa7.22□□□□□ -1.25
LRRC40-201ENST00000370952 A0A0J9YXV3 536 aa7.22□□□□□ -1.25
LRRC40-201ENST00000370952 LEPROTO15243 131 aa7.22□□□□□ -1.25
LRRC40-201ENST00000370952 PRSS2P07478 247 aa7.22□□□□□ -1.25
LRRC40-201ENST00000370952 TMEM219Q86XT9 240 aa7.22□□□□□ -1.25
LRRC40-201ENST00000370952 Q8NA96 180 aa7.22□□□□□ -1.25
LRRC40-201ENST00000370952 ZFHX2Q9C0A1 2572 aaPredicted RBP7.22□□□□□ -1.25
LRRC40-201ENST00000370952 TRBV7-1A0A0A6YYK4 115 aa7.22□□□□□ -1.25
LRRC40-201ENST00000370952 TRBV10-2A0A0K0K1G8 114 aa7.22□□□□□ -1.25
LRRC40-201ENST00000370952 OVOL1O14753 267 aa7.22□□□□□ -1.25
LRRC40-201ENST00000370952 ZNF22P17026 224 aaPredicted RBP7.22□□□□□ -1.25
LRRC40-201ENST00000370952 C2orf82Q6UX34 121 aa7.22□□□□□ -1.25
LRRC40-201ENST00000370952 MAP1AP78559 2803 aaPredicted RBP7.21□□□□□ -1.25
LRRC40-201ENST00000370952 M0QXV9 152 aa7.21□□□□□ -1.26
LRRC40-201ENST00000370952 CFAP161Q6P656 301 aa7.21□□□□□ -1.26
LRRC40-201ENST00000370952 A0A0J9YXY3 114 aa7.21□□□□□ -1.26
LRRC40-201ENST00000370952 FOXC1Q12948 553 aa7.21□□□□□ -1.26
LRRC40-201ENST00000370952 MEIG1Q5JSS6 88 aa7.21□□□□□ -1.26
LRRC40-201ENST00000370952 MINOS1Q5TGZ0 78 aa7.21□□□□□ -1.26
LRRC40-201ENST00000370952 CLEC2BQ92478 149 aa7.21□□□□□ -1.26
LRRC40-201ENST00000370952 DUX3Q96PT4 197 aa7.21□□□□□ -1.26
LRRC40-201ENST00000370952 FAM110AQ9BQ89 295 aa7.21□□□□□ -1.26
LRRC40-201ENST00000370952 MINOS1-NBL1R4GNA1 71 aa7.21□□□□□ -1.26
LRRC40-201ENST00000370952 OOSP1A8MZH6 123 aa7.2□□□□□ -1.26
LRRC40-201ENST00000370952 LGALS9O00182 355 aa7.2□□□□□ -1.26
LRRC40-201ENST00000370952 SOCS3O14543 225 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms