RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 ZC2HC1AQ96GY0 325 aa10.8□□□□□ -0.68
VMA21-202ENST00000370361 KRBOX1C9JBD0 128 aa10.79□□□□□ -0.68
VMA21-202ENST00000370361 LTAP01374 205 aa10.79□□□□□ -0.68
VMA21-202ENST00000370361 IGHV3-30P01768 117 aa10.79□□□□□ -0.68
VMA21-202ENST00000370361 IGHV3-33P01772 117 aa10.79□□□□□ -0.68
VMA21-202ENST00000370361 S100A9P06702 114 aaKnown RBP10.79□□□□□ -0.68
VMA21-202ENST00000370361 IGHV3-30-3P0DP02 117 aa10.79□□□□□ -0.68
VMA21-202ENST00000370361 IGHV3-30-5P0DP03 117 aa10.79□□□□□ -0.68
VMA21-202ENST00000370361 AKR1C3P42330 323 aa10.79□□□□□ -0.68
VMA21-202ENST00000370361 SULT1A2P50226 295 aa10.79□□□□□ -0.68
VMA21-202ENST00000370361 SLC51BQ86UW2 128 aa10.79□□□□□ -0.68
VMA21-202ENST00000370361 RMI2Q96E14 147 aa10.79□□□□□ -0.68
VMA21-202ENST00000370361 Q9HAA7 133 aa10.79□□□□□ -0.68
VMA21-202ENST00000370361 TRBV10-1A0A0K0K1A3 114 aa10.78□□□□□ -0.68
VMA21-202ENST00000370361 SCO2A0A1W2PP80 73 aa10.78□□□□□ -0.68
VMA21-202ENST00000370361 H3BVH4 76 aa10.78□□□□□ -0.68
VMA21-202ENST00000370361 CCL20P78556 96 aa10.78□□□□□ -0.68
VMA21-202ENST00000370361 ZNF674Q2M3X9 581 aa10.78□□□□□ -0.68
VMA21-202ENST00000370361 LINC01559Q495D7 138 aa10.78□□□□□ -0.68
VMA21-202ENST00000370361 Q5VSD8 79 aa10.78□□□□□ -0.68
VMA21-202ENST00000370361 CHCHD7Q9BUK0 85 aa10.78□□□□□ -0.68
VMA21-202ENST00000370361 PHLDA3Q9Y5J5 127 aa10.78□□□□□ -0.68
VMA21-202ENST00000370361 URGCP-MRPS24S4R325 110 aa10.78□□□□□ -0.68
VMA21-202ENST00000370361 GAGE12JA6NER3 117 aa10.77□□□□□ -0.69
VMA21-202ENST00000370361 FAM229AH3BQW9 127 aa10.77□□□□□ -0.69
VMA21-202ENST00000370361 SH2D1AO60880 128 aa10.77□□□□□ -0.69
VMA21-202ENST00000370361 ARMS2P0C7Q2 107 aa10.77□□□□□ -0.69
VMA21-202ENST00000370361 INAFM2P0DMQ5 153 aa10.77□□□□□ -0.69
VMA21-202ENST00000370361 FUSP35637 526 aaKnown RBP eCLIP10.77□□□□□ -0.69
VMA21-202ENST00000370361 GAGE1Q13065 139 aa10.77□□□□□ -0.69
VMA21-202ENST00000370361 GAGE4Q13068 117 aa10.77□□□□□ -0.69
VMA21-202ENST00000370361 GAGE5Q13069 117 aa10.77□□□□□ -0.69
VMA21-202ENST00000370361 GAGE13Q4V321 117 aa10.77□□□□□ -0.69
VMA21-202ENST00000370361 DMRTA1Q5VZB9 504 aa10.77□□□□□ -0.69
VMA21-202ENST00000370361 ZFP82Q8N141 532 aa10.77□□□□□ -0.69
VMA21-202ENST00000370361 MANBALQ9NQG1 85 aa10.77□□□□□ -0.69
VMA21-202ENST00000370361 ELOBQ15370 118 aa10.76□□□□□ -0.69
VMA21-202ENST00000370361 Q6ZSN1 163 aa10.76□□□□□ -0.69
VMA21-202ENST00000370361 C9orf62Q8N4C0 152 aa10.76□□□□□ -0.69
VMA21-202ENST00000370361 SFRP2Q96HF1 295 aa10.76□□□□□ -0.69
VMA21-202ENST00000370361 CXCL1P09341 107 aa10.75□□□□□ -0.69
VMA21-202ENST00000370361 KCNIP4Q6PIL6 250 aa10.75□□□□□ -0.69
VMA21-202ENST00000370361 MLST8Q9BVC4 326 aa10.75□□□□□ -0.69
VMA21-202ENST00000370361 GNG13Q9P2W3 67 aa10.75□□□□□ -0.69
VMA21-202ENST00000370361 TEX46H3BTG2 121 aa10.74□□□□□ -0.69
VMA21-202ENST00000370361 M0R036 132 aa10.74□□□□□ -0.69
VMA21-202ENST00000370361 RPL36AP83881 106 aaKnown RBP10.74□□□□□ -0.69
VMA21-202ENST00000370361 RPL36ALQ969Q0 106 aaKnown RBP10.74□□□□□ -0.69
VMA21-202ENST00000370361 C11orf52Q96A22 123 aa10.74□□□□□ -0.69
VMA21-202ENST00000370361 FAM74A4Q5TZK3 123 aa10.73□□□□□ -0.69
VMA21-202ENST00000370361 BAGE2Q86Y30 109 aa10.73□□□□□ -0.69
VMA21-202ENST00000370361 C14orf178Q8N769 122 aaPredicted RBP10.73□□□□□ -0.69
VMA21-202ENST00000370361 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.73□□□□□ -0.69
VMA21-202ENST00000370361 SAMD10Q9BYL1 202 aa10.73□□□□□ -0.69
VMA21-202ENST00000370361 JPT2Q9H910 190 aa10.73□□□□□ -0.69
VMA21-202ENST00000370361 TRBV7-3A0A075B6L6 115 aa10.72□□□□□ -0.69
VMA21-202ENST00000370361 A0A1B0GVG6 124 aa10.72□□□□□ -0.69
VMA21-202ENST00000370361 PKIAP61925 76 aa10.72□□□□□ -0.69
VMA21-202ENST00000370361 NIT1Q86X76 327 aa10.72□□□□□ -0.69
VMA21-202ENST00000370361 A0A087WX48 190 aa10.71□□□□□ -0.69
VMA21-202ENST00000370361 GRIFINA4D1Z8 144 aa10.71□□□□□ -0.69
VMA21-202ENST00000370361 M0R381 172 aa10.71□□□□□ -0.69
VMA21-202ENST00000370361 Q0VG73 95 aa10.71□□□□□ -0.69
VMA21-202ENST00000370361 Q8N976 141 aa10.71□□□□□ -0.69
VMA21-202ENST00000370361 DERL1Q9BUN8 251 aa10.71□□□□□ -0.69
VMA21-202ENST00000370361 RPL35P42766 123 aaKnown RBP10.7□□□□□ -0.7
VMA21-202ENST00000370361 RAB4BP61018 213 aa10.7□□□□□ -0.7
VMA21-202ENST00000370361 DAZ4Q86SG3 579 aaKnown RBP10.7□□□□□ -0.7
VMA21-202ENST00000370361 OR10G8Q8NGN5 311 aa10.7□□□□□ -0.7
VMA21-202ENST00000370361 DAZ3Q9NR90 486 aaKnown RBP10.7□□□□□ -0.7
VMA21-202ENST00000370361 A0A087WWL8 130 aa10.69□□□□□ -0.7
VMA21-202ENST00000370361 TMSB15BA0A087X1C1 80 aa10.69□□□□□ -0.7
VMA21-202ENST00000370361 IFNA1P01562 189 aa10.69□□□□□ -0.7
VMA21-202ENST00000370361 UBE2D3P61077 147 aa10.69□□□□□ -0.7
VMA21-202ENST00000370361 UBE2D2P62837 147 aa10.69□□□□□ -0.7
VMA21-202ENST00000370361 MEF2BQ02080 365 aaPredicted RBP10.69□□□□□ -0.7
VMA21-202ENST00000370361 Q6ZSA8 131 aa10.69□□□□□ -0.7
VMA21-202ENST00000370361 DMBT1Q9UGM3 2413 aaPredicted RBP10.68□□□□□ -0.7
VMA21-202ENST00000370361 PDE6DO43924 150 aa10.68□□□□□ -0.7
VMA21-202ENST00000370361 OR5AL1P0C617 328 aa10.68□□□□□ -0.7
VMA21-202ENST00000370361 BCL2P10415 239 aa10.68□□□□□ -0.7
VMA21-202ENST00000370361 TMEM97Q5BJF2 176 aa10.68□□□□□ -0.7
VMA21-202ENST00000370361 SMR3BP02814 79 aaPredicted RBP10.67□□□□□ -0.7
VMA21-202ENST00000370361 PLA2G1BP04054 148 aaKnown RBP10.67□□□□□ -0.7
VMA21-202ENST00000370361 RPL19P84098 196 aaKnown RBP10.67□□□□□ -0.7
VMA21-202ENST00000370361 C14orf177Q52M58 125 aa10.67□□□□□ -0.7
VMA21-202ENST00000370361 ATRAIDQ6UW56 229 aa10.67□□□□□ -0.7
VMA21-202ENST00000370361 ALKAL2Q6UX46 152 aa10.67□□□□□ -0.7
VMA21-202ENST00000370361 Q8N3U1 123 aa10.67□□□□□ -0.7
VMA21-202ENST00000370361 SSBP4Q9BWG4 385 aaPredicted RBP10.67□□□□□ -0.7
VMA21-202ENST00000370361 Q9UF83 564 aa10.67□□□□□ -0.7
VMA21-202ENST00000370361 VAX2Q9UIW0 290 aa10.67□□□□□ -0.7
VMA21-202ENST00000370361 IGKV2D-24A0A075B6R9 120 aa10.66□□□□□ -0.7
VMA21-202ENST00000370361 SNAI2O43623 268 aa10.66□□□□□ -0.7
VMA21-202ENST00000370361 IGLV2-8P01709 118 aa10.66□□□□□ -0.7
VMA21-202ENST00000370361 TAGLN2P37802 199 aaKnown RBP10.66□□□□□ -0.7
VMA21-202ENST00000370361 NKX2-5P52952 324 aaPredicted RBP10.66□□□□□ -0.7
VMA21-202ENST00000370361 CENPWQ5EE01 88 aa10.66□□□□□ -0.7
VMA21-202ENST00000370361 PRR27Q6MZM9 219 aa10.66□□□□□ -0.7
VMA21-202ENST00000370361 KLK12Q9UKR0 248 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms