RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 GAGE12HA6NDE8 117 aa8.95□□□□□ -0.98
COPA-202ENST00000368069 VWC2LB2RUY7 222 aa8.95□□□□□ -0.98
COPA-202ENST00000368069 RPL39P62891 51 aaKnown RBP8.95□□□□□ -0.98
COPA-202ENST00000368069 GAGE7O76087 117 aa8.95□□□□□ -0.98
COPA-202ENST00000368069 GAGE12FP0CL80 117 aa8.95□□□□□ -0.98
COPA-202ENST00000368069 GAGE12GP0CL81 117 aa8.95□□□□□ -0.98
COPA-202ENST00000368069 GAGE12IP0CL82 117 aa8.95□□□□□ -0.98
COPA-202ENST00000368069 TRAV12-1A0A0B4J245 112 aa8.95□□□□□ -0.98
COPA-202ENST00000368069 IGLV2-11P01706 119 aa8.95□□□□□ -0.98
COPA-202ENST00000368069 IGHG2P01859 326 aa8.95□□□□□ -0.98
COPA-202ENST00000368069 LMO4P61968 165 aa8.95□□□□□ -0.98
COPA-202ENST00000368069 TEX48A0A1B0GUV7 120 aa8.94□□□□□ -0.98
COPA-202ENST00000368069 SLURP1P55000 103 aa8.94□□□□□ -0.98
COPA-202ENST00000368069 LINC00310P59036 64 aa8.94□□□□□ -0.98
COPA-202ENST00000368069 NRGNQ92686 78 aa8.94□□□□□ -0.98
COPA-202ENST00000368069 BAALCQ8WXS3 180 aa8.94□□□□□ -0.98
COPA-202ENST00000368069 TOMM6Q96B49 74 aa8.94□□□□□ -0.98
COPA-202ENST00000368069 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.94□□□□□ -0.98
COPA-202ENST00000368069 IGKV2-29A2NJV5 120 aaPredicted RBP8.94□□□□□ -0.98
COPA-202ENST00000368069 H3BMM0 161 aa8.94□□□□□ -0.98
COPA-202ENST00000368069 FSTL3O95633 263 aa8.94□□□□□ -0.98
COPA-202ENST00000368069 UBE2WQ96B02 151 aa8.94□□□□□ -0.98
COPA-202ENST00000368069 ATRXP46100 2492 aa8.94□□□□□ -0.98
COPA-202ENST00000368069 SH2D6Q7Z4S9 175 aa8.93□□□□□ -0.98
COPA-202ENST00000368069 Q8N1Y9 231 aa8.93□□□□□ -0.98
COPA-202ENST00000368069 A0A0J9YXV3 536 aa8.93□□□□□ -0.98
COPA-202ENST00000368069 SLC25A20O43772 301 aa8.93□□□□□ -0.98
COPA-202ENST00000368069 S100A7L2Q5SY68 101 aa8.93□□□□□ -0.98
COPA-202ENST00000368069 TMEM243Q9BU79 118 aa8.93□□□□□ -0.98
COPA-202ENST00000368069 MED14OSP0DP75 135 aa8.92□□□□□ -0.98
COPA-202ENST00000368069 U3KQE9 123 aa8.92□□□□□ -0.98
COPA-202ENST00000368069 NACAE9PAV3 2078 aa8.92□□□□□ -0.98
COPA-202ENST00000368069 IGHV4OR15-8A0A075B7B6 117 aa8.92□□□□□ -0.98
COPA-202ENST00000368069 A0A087WW49 117 aa8.92□□□□□ -0.98
COPA-202ENST00000368069 K7EMT4 169 aa8.92□□□□□ -0.98
COPA-202ENST00000368069 APRG1Q8IVJ8 170 aa8.92□□□□□ -0.98
COPA-202ENST00000368069 CFC1BP0CG36 223 aa8.92□□□□□ -0.98
COPA-202ENST00000368069 CFC1P0CG37 223 aa8.92□□□□□ -0.98
COPA-202ENST00000368069 GAGE6Q13070 117 aa8.92□□□□□ -0.98
COPA-202ENST00000368069 JPT2Q9H910 190 aa8.92□□□□□ -0.98
COPA-202ENST00000368069 ARHGAP32A7KAX9 2087 aa8.91□□□□□ -0.98
COPA-202ENST00000368069 SMAD5-AS1Q9Y6J3 95 aa8.91□□□□□ -0.98
COPA-202ENST00000368069 WNK1Q9H4A3 2382 aa8.91□□□□□ -0.98
COPA-202ENST00000368069 NCOR2Q9Y618 2525 aa8.91□□□□□ -0.98
COPA-202ENST00000368069 EBI3Q14213 229 aa8.91□□□□□ -0.98
COPA-202ENST00000368069 SS18Q15532 418 aa8.91□□□□□ -0.98
COPA-202ENST00000368069 DSCAMO60469 2012 aa8.91□□□□□ -0.98
COPA-202ENST00000368069 C11orf86A6NJI1 115 aa8.9□□□□□ -0.98
COPA-202ENST00000368069 E9PLD3 99 aa8.9□□□□□ -0.98
COPA-202ENST00000368069 GPHB5Q86YW7 130 aa8.9□□□□□ -0.98
COPA-202ENST00000368069 ZFAND3Q9H8U3 227 aa8.9□□□□□ -0.98
COPA-202ENST00000368069 A6NDX4 124 aa8.9□□□□□ -0.98
COPA-202ENST00000368069 HERVK_113P63121 156 aa8.9□□□□□ -0.98
COPA-202ENST00000368069 PFN2P35080 140 aa8.9□□□□□ -0.98
COPA-202ENST00000368069 WFDC2Q14508 124 aa8.9□□□□□ -0.99
COPA-202ENST00000368069 IGF1P05019 195 aa8.89□□□□□ -0.99
COPA-202ENST00000368069 GAGE2AQ6NT46 116 aa8.89□□□□□ -0.99
COPA-202ENST00000368069 OVOL2Q9BRP0 275 aa8.89□□□□□ -0.99
COPA-202ENST00000368069 MDFICQ9P1T7 246 aa8.89□□□□□ -0.99
COPA-202ENST00000368069 C19orf84I3L1E1 186 aa8.89□□□□□ -0.99
COPA-202ENST00000368069 TIMM17AQ99595 171 aa8.89□□□□□ -0.99
COPA-202ENST00000368069 A4D1N5 150 aa8.88□□□□□ -0.99
COPA-202ENST00000368069 C11orf71Q6IPW1 123 aa8.88□□□□□ -0.99
COPA-202ENST00000368069 NTN5Q8WTR8 489 aaPredicted RBP8.88□□□□□ -0.99
COPA-202ENST00000368069 SPANXA1Q9NS26 97 aa8.88□□□□□ -0.99
COPA-202ENST00000368069 C20orf173Q96LM9 149 aa8.88□□□□□ -0.99
COPA-202ENST00000368069 NOP10Q9NPE3 64 aaKnown RBP8.88□□□□□ -0.99
COPA-202ENST00000368069 PTPN13Q12923 2485 aa8.88□□□□□ -0.99
COPA-202ENST00000368069 TNFRSF13BO14836 293 aaPredicted RBP8.88□□□□□ -0.99
COPA-202ENST00000368069 CARD19Q96LW7 228 aa8.88□□□□□ -0.99
COPA-202ENST00000368069 U3KQK5 164 aa8.88□□□□□ -0.99
COPA-202ENST00000368069 RNF185Q96GF1 192 aa8.87□□□□□ -0.99
COPA-202ENST00000368069 NOTCH2Q04721 2471 aa8.87□□□□□ -0.99
COPA-202ENST00000368069 A0A0J9YX75 114 aa8.87□□□□□ -0.99
COPA-202ENST00000368069 MUSTN1Q8IVN3 82 aa8.87□□□□□ -0.99
COPA-202ENST00000368069 Q9H8V8 135 aa8.87□□□□□ -0.99
COPA-202ENST00000368069 SPAG8Q99932 426 aaPredicted RBP8.86□□□□□ -0.99
COPA-202ENST00000368069 COL4A2P08572 1712 aa8.86□□□□□ -0.99
COPA-202ENST00000368069 CCL24O00175 119 aa8.86□□□□□ -0.99
COPA-202ENST00000368069 PRB1P04280 392 aa8.86□□□□□ -0.99
COPA-202ENST00000368069 Q8N976 141 aa8.86□□□□□ -0.99
COPA-202ENST00000368069 CEP295Q9C0D2 2601 aa8.86□□□□□ -0.99
COPA-202ENST00000368069 DSCAML1Q8TD84 2053 aa8.86□□□□□ -0.99
COPA-202ENST00000368069 Q8N6K4 173 aa8.86□□□□□ -0.99
COPA-202ENST00000368069 OPRPNQ99935 248 aaPredicted RBP8.86□□□□□ -0.99
COPA-202ENST00000368069 BPTFQ12830 3046 aa8.85□□□□□ -0.99
COPA-202ENST00000368069 IGKV2D-26A0A0A0MRZ7 120 aa8.85□□□□□ -0.99
COPA-202ENST00000368069 PRSS47A8MTI9 375 aa8.85□□□□□ -0.99
COPA-202ENST00000368069 GHRHP01286 108 aa8.85□□□□□ -0.99
COPA-202ENST00000368069 DEFB113Q30KQ7 82 aa8.85□□□□□ -0.99
COPA-202ENST00000368069 DNAJC30Q96LL9 226 aa8.84□□□□□ -0.99
COPA-202ENST00000368069 TMEM89A2RUT3 159 aa8.84□□□□□ -0.99
COPA-202ENST00000368069 RNF152Q8N8N0 203 aa8.84□□□□□ -0.99
COPA-202ENST00000368069 URB1-AS1Q96HZ7 61 aa8.84□□□□□ -0.99
COPA-202ENST00000368069 LAMTOR3Q9UHA4 124 aa8.84□□□□□ -0.99
COPA-202ENST00000368069 NXPH4O95158 308 aa8.84□□□□□ -0.99
COPA-202ENST00000368069 HIST1H4AP62805 103 aaKnown RBP8.84□□□□□ -0.99
COPA-202ENST00000368069 ZFAND2AQ8N6M9 145 aa8.84□□□□□ -0.99
COPA-202ENST00000368069 A0A096LPF7 62 aa8.83□□□□□ -1
COPA-202ENST00000368069 C20orf203Q8NBC4 194 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms