RNA–Protein interactions for RNA: ENST00000354452.7

TCF4-201, Transcript of transcription factor 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TCF4, Length 3,482 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-201ENST00000354452 MEIG1Q5JSS6 88 aa13.44□□□□□ -0.26
TCF4-201ENST00000354452 UBTD1Q9HAC8 227 aa13.44□□□□□ -0.26
TCF4-201ENST00000354452 LINC01546A6NGU7 62 aa13.44□□□□□ -0.26
TCF4-201ENST00000354452 TSPEAR-AS2P59090 65 aa13.44□□□□□ -0.26
TCF4-201ENST00000354452 TRAV12-3A0A0B4J271 114 aa13.43□□□□□ -0.26
TCF4-201ENST00000354452 A0A0U1RRA0 63 aa13.43□□□□□ -0.26
TCF4-201ENST00000354452 RBAKDNA6NC62 111 aa13.43□□□□□ -0.26
TCF4-201ENST00000354452 COX6CP09669 75 aa13.43□□□□□ -0.26
TCF4-201ENST00000354452 PRO3102Q9H379 93 aa13.43□□□□□ -0.26
TCF4-201ENST00000354452 PPP1R17O96001 155 aa13.43□□□□□ -0.26
TCF4-201ENST00000354452 IGHV3-30P01768 117 aa13.43□□□□□ -0.26
TCF4-201ENST00000354452 IGHV3-30-5P0DP03 117 aa13.43□□□□□ -0.26
TCF4-201ENST00000354452 TRBV7-9A0A0J9YWB2 115 aa13.42□□□□□ -0.26
TCF4-201ENST00000354452 VCYO14598 125 aa13.42□□□□□ -0.26
TCF4-201ENST00000354452 H3BMM0 161 aa13.41□□□□□ -0.26
TCF4-201ENST00000354452 LINC01620Q4KN68 170 aa13.41□□□□□ -0.26
TCF4-201ENST00000354452 PRR30Q53SZ7 412 aaPredicted RBP13.41□□□□□ -0.26
TCF4-201ENST00000354452 SHISA2Q6UWI4 295 aa13.41□□□□□ -0.26
TCF4-201ENST00000354452 SLC25A29Q8N8R3 303 aa13.41□□□□□ -0.26
TCF4-201ENST00000354452 UBE2WQ96B02 151 aa13.41□□□□□ -0.26
TCF4-201ENST00000354452 RNASE13Q5GAN3 156 aaKnown RBP13.41□□□□□ -0.26
TCF4-201ENST00000354452 DUX3Q96PT4 197 aa13.41□□□□□ -0.26
TCF4-201ENST00000354452 RPL13AP40429 203 aaKnown RBP13.41□□□□□ -0.26
TCF4-201ENST00000354452 TRAV8-3A0A0A6YYJ7 113 aa13.4□□□□□ -0.26
TCF4-201ENST00000354452 LINC01619G3V211 115 aa13.4□□□□□ -0.26
TCF4-201ENST00000354452 LINC00477Q96M19 166 aa13.4□□□□□ -0.26
TCF4-201ENST00000354452 ZFAND3Q9H8U3 227 aa13.4□□□□□ -0.26
TCF4-201ENST00000354452 GRNP28799 593 aaKnown RBP13.39□□□□□ -0.27
TCF4-201ENST00000354452 TMEM95Q3KNT9 176 aa13.39□□□□□ -0.27
TCF4-201ENST00000354452 PLA2G2CQ5R387 149 aa13.39□□□□□ -0.27
TCF4-201ENST00000354452 C20orf173Q96LM9 149 aa13.39□□□□□ -0.27
TCF4-201ENST00000354452 RHODO00212 210 aa13.39□□□□□ -0.27
TCF4-201ENST00000354452 C9orf47Q6ZRZ4 202 aa13.39□□□□□ -0.27
TCF4-201ENST00000354452 CRYGDP07320 174 aa13.38□□□□□ -0.27
TCF4-201ENST00000354452 ZNRF2Q8NHG8 242 aa13.38□□□□□ -0.27
TCF4-201ENST00000354452 ASH1LQ9NR48 2969 aaKnown RBP13.38□□□□□ -0.27
TCF4-201ENST00000354452 SVEP1Q4LDE5 3571 aa13.38□□□□□ -0.27
TCF4-201ENST00000354452 IGHV3-73A0A0B4J1V6 119 aa13.38□□□□□ -0.27
TCF4-201ENST00000354452 A0A0J9YXV3 536 aa13.38□□□□□ -0.27
TCF4-201ENST00000354452 C9orf139Q6ZV77 190 aa13.38□□□□□ -0.27
TCF4-201ENST00000354452 CCDC140Q96MF4 163 aa13.38□□□□□ -0.27
TCF4-201ENST00000354452 IGHV3-33P01772 117 aa13.38□□□□□ -0.27
TCF4-201ENST00000354452 COX6B1P14854 86 aa13.38□□□□□ -0.27
TCF4-201ENST00000354452 FAM110DQ8TAY7 271 aaPredicted RBP13.38□□□□□ -0.27
TCF4-201ENST00000354452 FOXC1Q12948 553 aa13.37□□□□□ -0.27
TCF4-201ENST00000354452 Q8N9W7 124 aa13.37□□□□□ -0.27
TCF4-201ENST00000354452 CHCHD5Q9BSY4 110 aa13.37□□□□□ -0.27
TCF4-201ENST00000354452 PF4V1P10720 104 aa13.37□□□□□ -0.27
TCF4-201ENST00000354452 RPL32P62910 135 aaKnown RBP13.37□□□□□ -0.27
TCF4-201ENST00000354452 SUMO4Q6EEV6 95 aa13.37□□□□□ -0.27
TCF4-201ENST00000354452 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.36□□□□□ -0.27
TCF4-201ENST00000354452 IGLV4-69A0A075B6H9 119 aa13.36□□□□□ -0.27
TCF4-201ENST00000354452 ELANEP08246 267 aa13.36□□□□□ -0.27
TCF4-201ENST00000354452 LY6EQ16553 131 aa13.36□□□□□ -0.27
TCF4-201ENST00000354452 CLEC2BQ92478 149 aa13.36□□□□□ -0.27
TCF4-201ENST00000354452 CLPSL1A2RUU4 121 aa13.36□□□□□ -0.27
TCF4-201ENST00000354452 PSMG3-AS1Q96PY0 264 aa13.36□□□□□ -0.27
TCF4-201ENST00000354452 ZNF580Q9UK33 172 aa13.36□□□□□ -0.27
TCF4-201ENST00000354452 ZNF876PQ49A33 203 aa13.35□□□□□ -0.27
TCF4-201ENST00000354452 M0R2P5 195 aa13.34□□□□□ -0.27
TCF4-201ENST00000354452 TSHBP01222 138 aa13.34□□□□□ -0.27
TCF4-201ENST00000354452 UNQ9165/PRO28630Q6UXU0 137 aa13.34□□□□□ -0.27
TCF4-201ENST00000354452 TRAV12-2A0A075B6T6 113 aa13.34□□□□□ -0.27
TCF4-201ENST00000354452 NHLRC4P0CG21 123 aaPredicted RBP13.34□□□□□ -0.27
TCF4-201ENST00000354452 ZFAND2AQ8N6M9 145 aa13.34□□□□□ -0.27
TCF4-201ENST00000354452 OVOL1O14753 267 aa13.34□□□□□ -0.27
TCF4-201ENST00000354452 TMEM141Q96I45 108 aa13.34□□□□□ -0.27
TCF4-201ENST00000354452 SAA4P35542 130 aa13.33□□□□□ -0.28
TCF4-201ENST00000354452 Q6ZSV7 163 aa13.33□□□□□ -0.28
TCF4-201ENST00000354452 DAND5Q8N907 189 aa13.33□□□□□ -0.28
TCF4-201ENST00000354452 TRBV12-3P01733 135 aa13.33□□□□□ -0.28
TCF4-201ENST00000354452 CD28P10747 220 aa13.33□□□□□ -0.28
TCF4-201ENST00000354452 TRIAP1O43715 76 aa13.32□□□□□ -0.28
TCF4-201ENST00000354452 IGFL3Q6UXB1 125 aa13.32□□□□□ -0.28
TCF4-201ENST00000354452 ZNF625Q96I27 306 aaPredicted RBP13.32□□□□□ -0.28
TCF4-201ENST00000354452 IGHV4-4A0A075B6R2 117 aa13.32□□□□□ -0.28
TCF4-201ENST00000354452 TRBV7-1A0A0A6YYK4 115 aa13.32□□□□□ -0.28
TCF4-201ENST00000354452 M0R1W7 72 aa13.32□□□□□ -0.28
TCF4-201ENST00000354452 TIMM21Q9BVV7 248 aa13.32□□□□□ -0.28
TCF4-201ENST00000354452 IGHV1-69DA0A0B4J2H0 117 aa13.31□□□□□ -0.28
TCF4-201ENST00000354452 CCL21O00585 134 aa13.31□□□□□ -0.28
TCF4-201ENST00000354452 UBE2E1P51965 193 aa13.31□□□□□ -0.28
TCF4-201ENST00000354452 GPHB5Q86YW7 130 aa13.31□□□□□ -0.28
TCF4-201ENST00000354452 IGIPA6NJ69 53 aa13.3□□□□□ -0.28
TCF4-201ENST00000354452 RNASE3P12724 160 aaKnown RBP13.3□□□□□ -0.28
TCF4-201ENST00000354452 CITED1Q99966 193 aa13.3□□□□□ -0.28
TCF4-201ENST00000354452 KLK9Q9UKQ9 250 aa13.3□□□□□ -0.28
TCF4-201ENST00000354452 CEMP1Q6PRD7 247 aaPredicted RBP13.3□□□□□ -0.28
TCF4-201ENST00000354452 TRAV41A0A0B4J266 112 aa13.3□□□□□ -0.28
TCF4-201ENST00000354452 TRBV10-2A0A0K0K1G8 114 aa13.3□□□□□ -0.28
TCF4-201ENST00000354452 DUX5Q96PT3 197 aa13.3□□□□□ -0.28
TCF4-201ENST00000354452 RHPN1-AS1Q9BWJ2 59 aa13.29□□□□□ -0.28
TCF4-201ENST00000354452 PRRC2AP48634 2157 aaKnown RBP13.29□□□□□ -0.28
TCF4-201ENST00000354452 PTPRQQ9UMZ3 2332 aa13.29□□□□□ -0.28
TCF4-201ENST00000354452 A8MZ25 164 aa13.29□□□□□ -0.28
TCF4-201ENST00000354452 TMEM263Q8WUH6 116 aaKnown RBP13.29□□□□□ -0.28
TCF4-201ENST00000354452 LEPROTO15243 131 aa13.29□□□□□ -0.28
TCF4-201ENST00000354452 ZFP36P26651 326 aaKnown RBP13.28□□□□□ -0.28
TCF4-201ENST00000354452 MRPL53Q96EL3 112 aaKnown RBP13.28□□□□□ -0.28
TCF4-201ENST00000354452 NDUFA12Q9UI09 145 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms