RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 WIPF2Q8TF74 440 aaPredicted RBP14.4□□□□□ -0.1
UBE3C-201ENST00000348165 HERVK_113P63121 156 aa14.4□□□□□ -0.1
UBE3C-201ENST00000348165 FAM167A-AS1Q96KT0 104 aa14.39□□□□□ -0.11
UBE3C-201ENST00000348165 NUPR1O60356 82 aa14.39□□□□□ -0.11
UBE3C-201ENST00000348165 ESM1Q9NQ30 184 aa14.39□□□□□ -0.11
UBE3C-201ENST00000348165 C19orf84I3L1E1 186 aa14.39□□□□□ -0.11
UBE3C-201ENST00000348165 RPL39LQ96EH5 51 aaKnown RBP14.39□□□□□ -0.11
UBE3C-201ENST00000348165 EP400Q96L91 3159 aa14.39□□□□□ -0.11
UBE3C-201ENST00000348165 C2orf70A6NJV1 201 aa14.39□□□□□ -0.11
UBE3C-201ENST00000348165 CRYGCP07315 174 aa14.39□□□□□ -0.11
UBE3C-201ENST00000348165 Q9HAA7 133 aa14.38□□□□□ -0.11
UBE3C-201ENST00000348165 IGKV2D-24A0A075B6R9 120 aa14.38□□□□□ -0.11
UBE3C-201ENST00000348165 PRSS47A8MTI9 375 aa14.38□□□□□ -0.11
UBE3C-201ENST00000348165 IGHG2P01859 326 aa14.38□□□□□ -0.11
UBE3C-201ENST00000348165 CARD19Q96LW7 228 aa14.38□□□□□ -0.11
UBE3C-201ENST00000348165 ZNF747Q9BV97 191 aa14.38□□□□□ -0.11
UBE3C-201ENST00000348165 TAX1BP3O14907 124 aa14.36□□□□□ -0.11
UBE3C-201ENST00000348165 CGB7P0DN87 165 aa14.36□□□□□ -0.11
UBE3C-201ENST00000348165 RMI2Q96E14 147 aa14.36□□□□□ -0.11
UBE3C-201ENST00000348165 G3V4G9 280 aa14.36□□□□□ -0.11
UBE3C-201ENST00000348165 ARHGAP21Q5T5U3 1957 aa14.36□□□□□ -0.11
UBE3C-201ENST00000348165 WI2-2373I1.2A0A1W2PRP0 233 aa14.35□□□□□ -0.11
UBE3C-201ENST00000348165 LMO4P61968 165 aa14.35□□□□□ -0.11
UBE3C-201ENST00000348165 C5orf38Q86SI9 138 aa14.35□□□□□ -0.11
UBE3C-201ENST00000348165 LTBP2Q14767 1821 aa14.35□□□□□ -0.11
UBE3C-201ENST00000348165 PCP2Q8IVA1 136 aa14.35□□□□□ -0.11
UBE3C-201ENST00000348165 SCRT2Q9NQ03 307 aa14.35□□□□□ -0.11
UBE3C-201ENST00000348165 MED12LQ86YW9 2145 aa14.35□□□□□ -0.11
UBE3C-201ENST00000348165 TRBV12-3P01733 135 aa14.35□□□□□ -0.11
UBE3C-201ENST00000348165 GYPEP15421 78 aa14.35□□□□□ -0.11
UBE3C-201ENST00000348165 SUMO4Q6EEV6 95 aa14.35□□□□□ -0.11
UBE3C-201ENST00000348165 JMJD1CQ15652 2540 aa14.34□□□□□ -0.11
UBE3C-201ENST00000348165 IGLL5B9A064 214 aa14.34□□□□□ -0.11
UBE3C-201ENST00000348165 IGHG4P01861 327 aa14.34□□□□□ -0.11
UBE3C-201ENST00000348165 UNQ9165/PRO28630Q6UXU0 137 aa14.34□□□□□ -0.11
UBE3C-201ENST00000348165 FANCD2OSQ96PS1 177 aa14.34□□□□□ -0.11
UBE3C-201ENST00000348165 UBL5Q9BZL1 73 aa14.34□□□□□ -0.11
UBE3C-201ENST00000348165 DENND4AQ7Z401 1863 aa14.34□□□□□ -0.11
UBE3C-201ENST00000348165 PCNX3Q9H6A9 2034 aa14.34□□□□□ -0.11
UBE3C-201ENST00000348165 PROP1O75360 226 aa14.34□□□□□ -0.11
UBE3C-201ENST00000348165 Q8N1Y9 231 aa14.33□□□□□ -0.11
UBE3C-201ENST00000348165 KMT2EQ8IZD2 1858 aa14.33□□□□□ -0.12
UBE3C-201ENST00000348165 J3KT08 172 aa14.33□□□□□ -0.12
UBE3C-201ENST00000348165 PRORYQ9H606 182 aa14.33□□□□□ -0.12
UBE3C-201ENST00000348165 GPHB5Q86YW7 130 aa14.33□□□□□ -0.12
UBE3C-201ENST00000348165 SPART-AS1P0CW21 52 aa14.32□□□□□ -0.12
UBE3C-201ENST00000348165 TMEM258P61165 79 aa14.32□□□□□ -0.12
UBE3C-201ENST00000348165 WFDC2Q14508 124 aa14.32□□□□□ -0.12
UBE3C-201ENST00000348165 K7EMT4 169 aa14.32□□□□□ -0.12
UBE3C-201ENST00000348165 PLXNB1O43157 2135 aa14.32□□□□□ -0.12
UBE3C-201ENST00000348165 IGLV10-54A0A075B6I4 117 aa14.32□□□□□ -0.12
UBE3C-201ENST00000348165 RBM3P98179 157 aaKnown RBP14.32□□□□□ -0.12
UBE3C-201ENST00000348165 ATP5G1P05496 136 aa14.31□□□□□ -0.12
UBE3C-201ENST00000348165 C16orf74Q96GX8 76 aa14.31□□□□□ -0.12
UBE3C-201ENST00000348165 LINC01548A6NM66 108 aa14.31□□□□□ -0.12
UBE3C-201ENST00000348165 TMEM61Q8N0U2 210 aa14.31□□□□□ -0.12
UBE3C-201ENST00000348165 ATP6V0E2Q8NHE4 81 aa14.31□□□□□ -0.12
UBE3C-201ENST00000348165 Q9H8V8 135 aa14.31□□□□□ -0.12
UBE3C-201ENST00000348165 DEFB4AO15263 64 aa14.3□□□□□ -0.12
UBE3C-201ENST00000348165 RBMY1FQ15415 496 aaKnown RBP14.3□□□□□ -0.12
UBE3C-201ENST00000348165 A6NDX4 124 aa14.3□□□□□ -0.12
UBE3C-201ENST00000348165 TRAV25A0A0B4J276 109 aa14.3□□□□□ -0.12
UBE3C-201ENST00000348165 CLPSL1A2RUU4 121 aa14.29□□□□□ -0.12
UBE3C-201ENST00000348165 RNF152Q8N8N0 203 aa14.29□□□□□ -0.12
UBE3C-201ENST00000348165 DSCAMO60469 2012 aa14.29□□□□□ -0.12
UBE3C-201ENST00000348165 GTSF1Q8WW33 167 aa14.29□□□□□ -0.12
UBE3C-201ENST00000348165 MRPL23Q16540 153 aaKnown RBP14.28□□□□□ -0.12
UBE3C-201ENST00000348165 DEFB135Q30KP9 77 aa14.28□□□□□ -0.12
UBE3C-201ENST00000348165 TEN1Q86WV5 123 aa14.28□□□□□ -0.12
UBE3C-201ENST00000348165 K7EMI3 77 aa14.28□□□□□ -0.12
UBE3C-201ENST00000348165 CFC1BP0CG36 223 aa14.28□□□□□ -0.12
UBE3C-201ENST00000348165 CFC1P0CG37 223 aa14.28□□□□□ -0.12
UBE3C-201ENST00000348165 A0A0J9YXV3 536 aa14.28□□□□□ -0.12
UBE3C-201ENST00000348165 MYCNOSP40205 109 aa14.28□□□□□ -0.12
UBE3C-201ENST00000348165 Q6ZPA2 131 aa14.28□□□□□ -0.12
UBE3C-201ENST00000348165 TLN2Q9Y4G6 2542 aa14.28□□□□□ -0.12
UBE3C-201ENST00000348165 ZFYVE26Q68DK2 2539 aa14.28□□□□□ -0.12
UBE3C-201ENST00000348165 C9orf47Q6ZRZ4 202 aa14.28□□□□□ -0.12
UBE3C-201ENST00000348165 LINC00173Q6ZV60 143 aa14.28□□□□□ -0.12
UBE3C-201ENST00000348165 K7EQD1 137 aa14.27□□□□□ -0.12
UBE3C-201ENST00000348165 HAMPP81172 84 aa14.27□□□□□ -0.12
UBE3C-201ENST00000348165 CEP295Q9C0D2 2601 aa14.27□□□□□ -0.12
UBE3C-201ENST00000348165 LOXL1Q08397 574 aaPredicted RBP14.27□□□□□ -0.13
UBE3C-201ENST00000348165 ANKRD39Q53RE8 183 aa14.27□□□□□ -0.13
UBE3C-201ENST00000348165 ZFP2Q6ZN57 461 aa14.27□□□□□ -0.13
UBE3C-201ENST00000348165 TNFRSF13BO14836 293 aaPredicted RBP14.27□□□□□ -0.13
UBE3C-201ENST00000348165 CRLF1O75462 422 aa14.26□□□□□ -0.13
UBE3C-201ENST00000348165 ACYP1P07311 99 aa14.26□□□□□ -0.13
UBE3C-201ENST00000348165 DNAJC9-AS1A6NH13 148 aa14.26□□□□□ -0.13
UBE3C-201ENST00000348165 IGHV3-30P01768 117 aa14.26□□□□□ -0.13
UBE3C-201ENST00000348165 IGHV3-33P01772 117 aa14.26□□□□□ -0.13
UBE3C-201ENST00000348165 IGHV3-30-3P0DP02 117 aa14.26□□□□□ -0.13
UBE3C-201ENST00000348165 IGHV3-30-5P0DP03 117 aa14.26□□□□□ -0.13
UBE3C-201ENST00000348165 LINC01545Q5VT33 79 aa14.26□□□□□ -0.13
UBE3C-201ENST00000348165 TRAV13-2A0A0B4J235 113 aa14.26□□□□□ -0.13
UBE3C-201ENST00000348165 FOXI1Q12951 378 aa14.26□□□□□ -0.13
UBE3C-201ENST00000348165 BRWD1-AS2P59051 145 aa14.26□□□□□ -0.13
UBE3C-201ENST00000348165 WFDC11Q8NEX6 87 aa14.25□□□□□ -0.13
UBE3C-201ENST00000348165 SLC25A29Q8N8R3 303 aa14.25□□□□□ -0.13
UBE3C-201ENST00000348165 RS1O15537 224 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 186.6 ms