RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 RPL39LQ96EH5 51 aaKnown RBP14.63□□□□□ -0.07
RTN1-202ENST00000342503 DDTP30046 118 aa14.63□□□□□ -0.07
RTN1-202ENST00000342503 BEAN1Q3B7T3 259 aa14.63□□□□□ -0.07
RTN1-202ENST00000342503 LINC01587Q99440 93 aa14.63□□□□□ -0.07
RTN1-202ENST00000342503 C20orf144Q9BQM9 153 aa14.63□□□□□ -0.07
RTN1-202ENST00000342503 PET117Q6UWS5 81 aa14.62□□□□□ -0.07
RTN1-202ENST00000342503 XCL2Q9UBD3 114 aa14.62□□□□□ -0.07
RTN1-202ENST00000342503 FCER1GP30273 86 aa14.61□□□□□ -0.07
RTN1-202ENST00000342503 LINC00467Q9BRT7 94 aa14.61□□□□□ -0.07
RTN1-202ENST00000342503 H0Y8G0 127 aa14.61□□□□□ -0.07
RTN1-202ENST00000342503 ZNF876PQ49A33 203 aa14.61□□□□□ -0.07
RTN1-202ENST00000342503 SUMO4Q6EEV6 95 aa14.61□□□□□ -0.07
RTN1-202ENST00000342503 C20orf78Q9BR46 151 aa14.61□□□□□ -0.07
RTN1-202ENST00000342503 SMIM2Q9BVW6 85 aa14.61□□□□□ -0.07
RTN1-202ENST00000342503 SUMO2P61956 95 aaKnown RBP14.6□□□□□ -0.07
RTN1-202ENST00000342503 FAM110AQ9BQ89 295 aa14.6□□□□□ -0.07
RTN1-202ENST00000342503 WFDC10AQ9H1F0 79 aa14.6□□□□□ -0.07
RTN1-202ENST00000342503 C19orf73Q9NVV2 129 aa14.6□□□□□ -0.07
RTN1-202ENST00000342503 C2CD3Q4AC94 2353 aa14.59□□□□□ -0.07
RTN1-202ENST00000342503 C20orf202A1L168 122 aa14.59□□□□□ -0.07
RTN1-202ENST00000342503 TCAPO15273 167 aa14.59□□□□□ -0.07
RTN1-202ENST00000342503 CRYGDP07320 174 aa14.59□□□□□ -0.07
RTN1-202ENST00000342503 FAM74A4Q5TZK3 123 aa14.59□□□□□ -0.07
RTN1-202ENST00000342503 MCRIP2Q9BUT9 160 aaKnown RBP14.59□□□□□ -0.07
RTN1-202ENST00000342503 F5H697 171 aa14.58□□□□□ -0.07
RTN1-202ENST00000342503 PPP1R17O96001 155 aa14.58□□□□□ -0.07
RTN1-202ENST00000342503 ZNF415Q09FC8 603 aa14.58□□□□□ -0.07
RTN1-202ENST00000342503 LAGE3Q14657 143 aa14.58□□□□□ -0.07
RTN1-202ENST00000342503 SPATA45Q537H7 98 aa14.58□□□□□ -0.07
RTN1-202ENST00000342503 TMEM158Q8WZ71 300 aa14.58□□□□□ -0.07
RTN1-202ENST00000342503 MAJINQ3KP22 176 aa14.58□□□□□ -0.08
RTN1-202ENST00000342503 NUTF2P61970 127 aaKnown RBP14.57□□□□□ -0.08
RTN1-202ENST00000342503 C1orf158Q8N1D5 194 aa14.57□□□□□ -0.08
RTN1-202ENST00000342503 LINC01545Q5VT33 79 aa14.56□□□□□ -0.08
RTN1-202ENST00000342503 C11orf72Q8NBR9 251 aa14.56□□□□□ -0.08
RTN1-202ENST00000342503 IFI27L1Q96BM0 104 aa14.56□□□□□ -0.08
RTN1-202ENST00000342503 CITED1Q99966 193 aa14.56□□□□□ -0.08
RTN1-202ENST00000342503 TRAV9-2A0A087WT02 112 aa14.55□□□□□ -0.08
RTN1-202ENST00000342503 ZNF56Q15929 161 aa14.55□□□□□ -0.08
RTN1-202ENST00000342503 ZNF705AQ6ZN79 300 aaPredicted RBP14.55□□□□□ -0.08
RTN1-202ENST00000342503 C18orf15Q96N68 181 aa14.55□□□□□ -0.08
RTN1-202ENST00000342503 TMEM208Q9BTX3 173 aa14.55□□□□□ -0.08
RTN1-202ENST00000342503 M0R2P5 195 aa14.55□□□□□ -0.08
RTN1-202ENST00000342503 SPATA3Q8NHX4 192 aa14.55□□□□□ -0.08
RTN1-202ENST00000342503 PMCHL2Q9BQD1 86 aa14.55□□□□□ -0.08
RTN1-202ENST00000342503 CSTL1Q9H114 145 aa14.54□□□□□ -0.08
RTN1-202ENST00000342503 ST20Q9HBF5 79 aa14.54□□□□□ -0.08
RTN1-202ENST00000342503 IGHV3OR16-12A0A075B7B8 117 aa14.53□□□□□ -0.08
RTN1-202ENST00000342503 RPL35AP18077 110 aaKnown RBP14.53□□□□□ -0.08
RTN1-202ENST00000342503 AZU1P20160 251 aa14.53□□□□□ -0.08
RTN1-202ENST00000342503 DEFA6Q01524 100 aa14.53□□□□□ -0.08
RTN1-202ENST00000342503 PTH2Q96A98 100 aa14.53□□□□□ -0.08
RTN1-202ENST00000342503 NIPBLQ6KC79 2804 aaeCLIP14.53□□□□□ -0.08
RTN1-202ENST00000342503 NUDT3O95989 172 aa14.52□□□□□ -0.08
RTN1-202ENST00000342503 GIG44P09565 113 aaPredicted RBP14.52□□□□□ -0.08
RTN1-202ENST00000342503 NDUFAF3Q9BU61 184 aa14.52□□□□□ -0.08
RTN1-202ENST00000342503 ORMDL2Q53FV1 153 aa14.52□□□□□ -0.09
RTN1-202ENST00000342503 SPXQ9BT56 116 aa14.52□□□□□ -0.09
RTN1-202ENST00000342503 M0QY20 66 aa14.51□□□□□ -0.09
RTN1-202ENST00000342503 RPL32P62910 135 aaKnown RBP14.51□□□□□ -0.09
RTN1-202ENST00000342503 LGALS9BQ3B8N2 356 aa14.51□□□□□ -0.09
RTN1-202ENST00000342503 LGALS9CQ6DKI2 356 aa14.51□□□□□ -0.09
RTN1-202ENST00000342503 MORN3Q6PF18 240 aaPredicted RBP14.51□□□□□ -0.09
RTN1-202ENST00000342503 NEGR1Q7Z3B1 354 aa14.51□□□□□ -0.09
RTN1-202ENST00000342503 C14orf144Q96I85 54 aa14.51□□□□□ -0.09
RTN1-202ENST00000342503 MIEN1Q9BRT3 115 aa14.51□□□□□ -0.09
RTN1-202ENST00000342503 K7EMI3 77 aa14.5□□□□□ -0.09
RTN1-202ENST00000342503 IGLL1P15814 213 aa14.5□□□□□ -0.09
RTN1-202ENST00000342503 POLR2KP53803 58 aaKnown RBP14.5□□□□□ -0.09
RTN1-202ENST00000342503 PIK3CD-AS1Q5SR53 167 aa14.5□□□□□ -0.09
RTN1-202ENST00000342503 C9orf66Q5T8R8 295 aa14.5□□□□□ -0.09
RTN1-202ENST00000342503 TRBV6-5A0A0K0K1A5 114 aa14.49□□□□□ -0.09
RTN1-202ENST00000342503 hDV102S1A0JD36 115 aa14.49□□□□□ -0.09
RTN1-202ENST00000342503 A8MWV9 139 aa14.49□□□□□ -0.09
RTN1-202ENST00000342503 INSL3P51460 131 aa14.49□□□□□ -0.09
RTN1-202ENST00000342503 MRPL16Q9NX20 251 aaKnown RBP14.49□□□□□ -0.09
RTN1-202ENST00000342503 IGHV3-73A0A0B4J1V6 119 aa14.49□□□□□ -0.09
RTN1-202ENST00000342503 NACAE9PAV3 2078 aa14.48□□□□□ -0.09
RTN1-202ENST00000342503 IGLC3P0DOY3 106 aa14.48□□□□□ -0.09
RTN1-202ENST00000342503 UFSP1Q6NVU6 142 aa14.48□□□□□ -0.09
RTN1-202ENST00000342503 F8P00451 2351 aa14.48□□□□□ -0.09
RTN1-202ENST00000342503 SDHAF1A6NFY7 115 aa14.47□□□□□ -0.09
RTN1-202ENST00000342503 VCYO14598 125 aa14.47□□□□□ -0.09
RTN1-202ENST00000342503 ATP5LO75964 103 aa14.47□□□□□ -0.09
RTN1-202ENST00000342503 IL17DQ8TAD2 202 aa14.47□□□□□ -0.09
RTN1-202ENST00000342503 GOLT1BQ9Y3E0 138 aa14.47□□□□□ -0.09
RTN1-202ENST00000342503 CFAP126Q5VTH2 177 aa14.46□□□□□ -0.09
RTN1-202ENST00000342503 RNASE8Q8TDE3 154 aaKnown RBP14.46□□□□□ -0.09
RTN1-202ENST00000342503 TOMM6Q96B49 74 aa14.46□□□□□ -0.09
RTN1-202ENST00000342503 C1QTNF4Q9BXJ3 329 aa14.46□□□□□ -0.1
RTN1-202ENST00000342503 HSBP1L1C9JCN9 74 aa14.45□□□□□ -0.1
RTN1-202ENST00000342503 FLNBO75369 2602 aaKnown RBP14.45□□□□□ -0.1
RTN1-202ENST00000342503 PRSS1P07477 247 aa14.45□□□□□ -0.1
RTN1-202ENST00000342503 GTSCR1Q86UQ5 136 aa14.45□□□□□ -0.1
RTN1-202ENST00000342503 CSNK1G2-AS1Q8NCQ2 148 aa14.45□□□□□ -0.1
RTN1-202ENST00000342503 UQCR10Q9UDW1 63 aa14.45□□□□□ -0.1
RTN1-202ENST00000342503 TRBV27A0A0K0K1C4 114 aa14.44□□□□□ -0.1
RTN1-202ENST00000342503 RS1O15537 224 aa14.44□□□□□ -0.1
RTN1-202ENST00000342503 DEFB104AQ8WTQ1 72 aa14.44□□□□□ -0.1
RTN1-202ENST00000342503 TMEM263Q8WUH6 116 aaKnown RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms