RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 RNASE13Q5GAN3 156 aaKnown RBP13.18□□□□□ -0.3
TRAPPC11-201ENST00000334690 HIGD1BQ9P298 99 aa13.18□□□□□ -0.3
TRAPPC11-201ENST00000334690 J3QKU1 62 aa13.18□□□□□ -0.3
TRAPPC11-201ENST00000334690 CCL25O15444 150 aa13.18□□□□□ -0.3
TRAPPC11-201ENST00000334690 DEFB136Q30KP8 78 aa13.17□□□□□ -0.3
TRAPPC11-201ENST00000334690 TMEM89A2RUT3 159 aa13.17□□□□□ -0.3
TRAPPC11-201ENST00000334690 GAGE12HA6NDE8 117 aa13.17□□□□□ -0.3
TRAPPC11-201ENST00000334690 TRAV12-1A0A0B4J245 112 aa13.17□□□□□ -0.3
TRAPPC11-201ENST00000334690 FSTL3O95633 263 aa13.17□□□□□ -0.3
TRAPPC11-201ENST00000334690 UTF1Q5T230 341 aa13.17□□□□□ -0.3
TRAPPC11-201ENST00000334690 UBE2DNLQ8IWF7 75 aa13.16□□□□□ -0.3
TRAPPC11-201ENST00000334690 PRO3102Q9H379 93 aa13.16□□□□□ -0.3
TRAPPC11-201ENST00000334690 MLST8Q9BVC4 326 aa13.16□□□□□ -0.3
TRAPPC11-201ENST00000334690 DEFB113Q30KQ7 82 aa13.16□□□□□ -0.3
TRAPPC11-201ENST00000334690 DEFB121Q5J5C9 76 aa13.15□□□□□ -0.3
TRAPPC11-201ENST00000334690 NOP10Q9NPE3 64 aaKnown RBP13.15□□□□□ -0.3
TRAPPC11-201ENST00000334690 PRSS47A8MTI9 375 aa13.15□□□□□ -0.3
TRAPPC11-201ENST00000334690 NXPH4O95158 308 aa13.15□□□□□ -0.3
TRAPPC11-201ENST00000334690 IFITM1P13164 125 aa13.15□□□□□ -0.3
TRAPPC11-201ENST00000334690 SLURP1P55000 103 aa13.15□□□□□ -0.3
TRAPPC11-201ENST00000334690 SPATA12Q7Z6I5 190 aa13.15□□□□□ -0.3
TRAPPC11-201ENST00000334690 CARD19Q96LW7 228 aa13.15□□□□□ -0.3
TRAPPC11-201ENST00000334690 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.15□□□□□ -0.31
TRAPPC11-201ENST00000334690 IGKV2-29A2NJV5 120 aaPredicted RBP13.15□□□□□ -0.31
TRAPPC11-201ENST00000334690 SPANXDQ9BXN6 97 aa13.15□□□□□ -0.31
TRAPPC11-201ENST00000334690 A0A0J9YXV3 536 aa13.14□□□□□ -0.31
TRAPPC11-201ENST00000334690 IGLL5B9A064 214 aa13.14□□□□□ -0.31
TRAPPC11-201ENST00000334690 C2orf70A6NJV1 201 aa13.14□□□□□ -0.31
TRAPPC11-201ENST00000334690 MUC22E2RYF6 1773 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC11-201ENST00000334690 Q9H8V8 135 aa13.14□□□□□ -0.31
TRAPPC11-201ENST00000334690 TIMM17AQ99595 171 aa13.13□□□□□ -0.31
TRAPPC11-201ENST00000334690 ODF3BA8MYP8 253 aa13.13□□□□□ -0.31
TRAPPC11-201ENST00000334690 F8WEM9 126 aa13.13□□□□□ -0.31
TRAPPC11-201ENST00000334690 C1orf229Q6ZS94 237 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC11-201ENST00000334690 HERV-K104P63124 156 aa13.13□□□□□ -0.31
TRAPPC11-201ENST00000334690 Q8N1Y9 231 aa13.13□□□□□ -0.31
TRAPPC11-201ENST00000334690 ANGP03950 147 aaKnown RBP13.13□□□□□ -0.31
TRAPPC11-201ENST00000334690 MBD6Q96DN6 1003 aa13.12□□□□□ -0.31
TRAPPC11-201ENST00000334690 SLC25A29Q8N8R3 303 aa13.12□□□□□ -0.31
TRAPPC11-201ENST00000334690 ODF1Q14990 250 aa13.12□□□□□ -0.31
TRAPPC11-201ENST00000334690 C22orf34Q6ZV56 151 aa13.12□□□□□ -0.31
TRAPPC11-201ENST00000334690 APRG1Q8IVJ8 170 aa13.12□□□□□ -0.31
TRAPPC11-201ENST00000334690 NTN5Q8WTR8 489 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC11-201ENST00000334690 PSCAO43653 123 aa13.12□□□□□ -0.31
TRAPPC11-201ENST00000334690 LINC00322Q6ZN03 302 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC11-201ENST00000334690 LMO4P61968 165 aa13.11□□□□□ -0.31
TRAPPC11-201ENST00000334690 E9PLD3 99 aa13.11□□□□□ -0.31
TRAPPC11-201ENST00000334690 IGHV4OR15-8A0A075B7B6 117 aa13.1□□□□□ -0.31
TRAPPC11-201ENST00000334690 A0A087WW49 117 aa13.1□□□□□ -0.31
TRAPPC11-201ENST00000334690 FXYD2P54710 66 aa13.1□□□□□ -0.31
TRAPPC11-201ENST00000334690 TOMM6Q96B49 74 aa13.1□□□□□ -0.31
TRAPPC11-201ENST00000334690 PLA2G5P39877 138 aa13.1□□□□□ -0.31
TRAPPC11-201ENST00000334690 UBL5Q9BZL1 73 aa13.1□□□□□ -0.31
TRAPPC11-201ENST00000334690 EDA2RQ9HAV5 297 aa13.1□□□□□ -0.31
TRAPPC11-201ENST00000334690 UNQ9165/PRO28630Q6UXU0 137 aa13.1□□□□□ -0.31
TRAPPC11-201ENST00000334690 HIVEP3Q5T1R4 2406 aa13.1□□□□□ -0.31
TRAPPC11-201ENST00000334690 TTTY13Q9BZ97 58 aa13.1□□□□□ -0.31
TRAPPC11-201ENST00000334690 YPEL4Q96NS1 127 aa13.09□□□□□ -0.31
TRAPPC11-201ENST00000334690 DAZ2Q13117 558 aaKnown RBP13.09□□□□□ -0.31
TRAPPC11-201ENST00000334690 DAZ4Q86SG3 579 aaKnown RBP13.09□□□□□ -0.31
TRAPPC11-201ENST00000334690 DAZ3Q9NR90 486 aaKnown RBP13.09□□□□□ -0.31
TRAPPC11-201ENST00000334690 A4D1N5 150 aa13.08□□□□□ -0.31
TRAPPC11-201ENST00000334690 TAX1BP3O14907 124 aa13.08□□□□□ -0.31
TRAPPC11-201ENST00000334690 A6NDX4 124 aa13.08□□□□□ -0.32
TRAPPC11-201ENST00000334690 BAALCQ8WXS3 180 aa13.08□□□□□ -0.32
TRAPPC11-201ENST00000334690 TEX48A0A1B0GUV7 120 aa13.08□□□□□ -0.32
TRAPPC11-201ENST00000334690 RPL39P62891 51 aaKnown RBP13.08□□□□□ -0.32
TRAPPC11-201ENST00000334690 ABCA2Q9BZC7 2435 aa13.08□□□□□ -0.32
TRAPPC11-201ENST00000334690 C16orf74Q96GX8 76 aa13.08□□□□□ -0.32
TRAPPC11-201ENST00000334690 CCDC140Q96MF4 163 aa13.08□□□□□ -0.32
TRAPPC11-201ENST00000334690 TRAV25A0A0B4J276 109 aa13.07□□□□□ -0.32
TRAPPC11-201ENST00000334690 CRYGBP07316 175 aa13.07□□□□□ -0.32
TRAPPC11-201ENST00000334690 A0A0J9YX75 114 aa13.07□□□□□ -0.32
TRAPPC11-201ENST00000334690 ZNF80P51504 273 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC11-201ENST00000334690 GDF5OSQ5U4N7 250 aa13.06□□□□□ -0.32
TRAPPC11-201ENST00000334690 IGHG4P01861 327 aa13.06□□□□□ -0.32
TRAPPC11-201ENST00000334690 IGLC6P0CF74 106 aa13.06□□□□□ -0.32
TRAPPC11-201ENST00000334690 RPL32P62910 135 aaKnown RBP13.06□□□□□ -0.32
TRAPPC11-201ENST00000334690 DSCAMO60469 2012 aa13.06□□□□□ -0.32
TRAPPC11-201ENST00000334690 XCL1P47992 114 aa13.06□□□□□ -0.32
TRAPPC11-201ENST00000334690 NKAPP1Q8N9T2 125 aa13.06□□□□□ -0.32
TRAPPC11-201ENST00000334690 A0A096LPF7 62 aa13.06□□□□□ -0.32
TRAPPC11-201ENST00000334690 DEFB1P60022 68 aa13.06□□□□□ -0.32
TRAPPC11-201ENST00000334690 K7EQD1 137 aa13.05□□□□□ -0.32
TRAPPC11-201ENST00000334690 TNFRSF13BO14836 293 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC11-201ENST00000334690 EBI3Q14213 229 aa13.05□□□□□ -0.32
TRAPPC11-201ENST00000334690 C9orf153Q5TBE3 101 aa13.05□□□□□ -0.32
TRAPPC11-201ENST00000334690 HCFC1P51610 2035 aa13.05□□□□□ -0.32
TRAPPC11-201ENST00000334690 CRLF1O75462 422 aa13.04□□□□□ -0.32
TRAPPC11-201ENST00000334690 TRBV12-3P01733 135 aa13.04□□□□□ -0.32
TRAPPC11-201ENST00000334690 SH2D6Q7Z4S9 175 aa13.04□□□□□ -0.32
TRAPPC11-201ENST00000334690 MUSTN1Q8IVN3 82 aa13.04□□□□□ -0.32
TRAPPC11-201ENST00000334690 C11orf86A6NJI1 115 aa13.04□□□□□ -0.32
TRAPPC11-201ENST00000334690 TRBV7-3A0A075B6L6 115 aa13.04□□□□□ -0.32
TRAPPC11-201ENST00000334690 ANKRD29Q8N6D5 301 aa13.04□□□□□ -0.32
TRAPPC11-201ENST00000334690 NUP210LQ5VU65 1888 aa13.04□□□□□ -0.32
TRAPPC11-201ENST00000334690 IGF1P05019 195 aa13.03□□□□□ -0.32
TRAPPC11-201ENST00000334690 C5orf38Q86SI9 138 aa13.03□□□□□ -0.32
TRAPPC11-201ENST00000334690 C20orf203Q8NBC4 194 aa13.03□□□□□ -0.32
TRAPPC11-201ENST00000334690 LOXL1Q08397 574 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms