RNA–Protein interactions for RNA: ENST00000318080.6

CRAT-201, Transcript of carnitine O-acetyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRAT, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-201ENST00000318080 GAGE12FP0CL80 117 aa12.14□□□□□ -0.47
CRAT-201ENST00000318080 GAGE12GP0CL81 117 aa12.14□□□□□ -0.47
CRAT-201ENST00000318080 GAGE12IP0CL82 117 aa12.14□□□□□ -0.47
CRAT-201ENST00000318080 SCGB1C2P0DMR2 95 aa12.14□□□□□ -0.47
CRAT-201ENST00000318080 GAGE4Q13068 117 aa12.14□□□□□ -0.47
CRAT-201ENST00000318080 EBI3Q14213 229 aa12.14□□□□□ -0.47
CRAT-201ENST00000318080 TEX29Q8N6K0 151 aa12.14□□□□□ -0.47
CRAT-201ENST00000318080 CRLF1O75462 422 aa12.14□□□□□ -0.47
CRAT-201ENST00000318080 C14orf178Q8N769 122 aaPredicted RBP12.14□□□□□ -0.47
CRAT-201ENST00000318080 BAALCQ8WXS3 180 aa12.14□□□□□ -0.47
CRAT-201ENST00000318080 MGPP08493 103 aa12.13□□□□□ -0.47
CRAT-201ENST00000318080 FAM110DQ8TAY7 271 aaPredicted RBP12.13□□□□□ -0.47
CRAT-201ENST00000318080 NRGNQ92686 78 aa12.13□□□□□ -0.47
CRAT-201ENST00000318080 SMIM2Q9BVW6 85 aa12.13□□□□□ -0.47
CRAT-201ENST00000318080 NEXN-AS1Q8NBZ9 246 aa12.13□□□□□ -0.47
CRAT-201ENST00000318080 FASNP49327 2511 aaKnown RBP12.13□□□□□ -0.47
CRAT-201ENST00000318080 PPDPFLQ8WWR9 84 aa12.13□□□□□ -0.47
CRAT-201ENST00000318080 SLC50A1Q9BRV3 221 aa12.13□□□□□ -0.47
CRAT-201ENST00000318080 CD7P09564 240 aa12.12□□□□□ -0.47
CRAT-201ENST00000318080 UBE2D1P51668 147 aa12.12□□□□□ -0.47
CRAT-201ENST00000318080 TSPEAR-AS2P59090 65 aa12.12□□□□□ -0.47
CRAT-201ENST00000318080 C11orf71Q6IPW1 123 aa12.12□□□□□ -0.47
CRAT-201ENST00000318080 C2orf66Q6UXQ4 117 aa12.12□□□□□ -0.47
CRAT-201ENST00000318080 TEN1Q86WV5 123 aa12.12□□□□□ -0.47
CRAT-201ENST00000318080 C3orf56Q8N813 242 aa12.12□□□□□ -0.47
CRAT-201ENST00000318080 DUSP14O95147 198 aaKnown RBP12.12□□□□□ -0.47
CRAT-201ENST00000318080 NDUFA11Q86Y39 141 aa12.12□□□□□ -0.47
CRAT-201ENST00000318080 PSMG4Q5JS54 123 aa12.11□□□□□ -0.47
CRAT-201ENST00000318080 C11orf86A6NJI1 115 aa12.11□□□□□ -0.47
CRAT-201ENST00000318080 CFC1BP0CG36 223 aa12.11□□□□□ -0.47
CRAT-201ENST00000318080 CFC1P0CG37 223 aa12.11□□□□□ -0.47
CRAT-201ENST00000318080 IGHV3-64A0A075B6Q5 118 aa12.1□□□□□ -0.47
CRAT-201ENST00000318080 TRAV4A0A0B4J268 109 aa12.1□□□□□ -0.47
CRAT-201ENST00000318080 UBE2D3P61077 147 aa12.1□□□□□ -0.47
CRAT-201ENST00000318080 UBE2D2P62837 147 aa12.1□□□□□ -0.47
CRAT-201ENST00000318080 C9orf47Q6ZRZ4 202 aa12.1□□□□□ -0.47
CRAT-201ENST00000318080 C16orf92Q96LL3 132 aa12.1□□□□□ -0.47
CRAT-201ENST00000318080 APCP25054 2843 aa12.1□□□□□ -0.47
CRAT-201ENST00000318080 RNF223E7ERA6 249 aa12.1□□□□□ -0.47
CRAT-201ENST00000318080 ELANEP08246 267 aa12.1□□□□□ -0.47
CRAT-201ENST00000318080 ZNF688P0C7X2 276 aa12.1□□□□□ -0.47
CRAT-201ENST00000318080 TMEM219Q86XT9 240 aa12.1□□□□□ -0.47
CRAT-201ENST00000318080 ZANQ9Y493 2812 aa12.09□□□□□ -0.47
CRAT-201ENST00000318080 IGHV4-4A0A075B6R2 117 aa12.09□□□□□ -0.47
CRAT-201ENST00000318080 A8MWV9 139 aa12.09□□□□□ -0.47
CRAT-201ENST00000318080 C9JAW5 83 aa12.09□□□□□ -0.47
CRAT-201ENST00000318080 RPL39P62891 51 aaKnown RBP12.09□□□□□ -0.47
CRAT-201ENST00000318080 METTL26Q96S19 204 aa12.09□□□□□ -0.47
CRAT-201ENST00000318080 COX6B1P14854 86 aa12.09□□□□□ -0.47
CRAT-201ENST00000318080 SUMO2P61956 95 aaKnown RBP12.09□□□□□ -0.47
CRAT-201ENST00000318080 HIST2H2BCQ6DN03 193 aa12.09□□□□□ -0.47
CRAT-201ENST00000318080 ATP6V0E2Q8NHE4 81 aa12.09□□□□□ -0.47
CRAT-201ENST00000318080 SIRPDQ9H106 197 aa12.09□□□□□ -0.47
CRAT-201ENST00000318080 BEX4Q9NWD9 120 aaPredicted RBP12.09□□□□□ -0.47
CRAT-201ENST00000318080 F6UB75 175 aa12.08□□□□□ -0.48
CRAT-201ENST00000318080 TRBV12-3P01733 135 aa12.08□□□□□ -0.48
CRAT-201ENST00000318080 SAA4P35542 130 aa12.08□□□□□ -0.48
CRAT-201ENST00000318080 TOMM6Q96B49 74 aa12.08□□□□□ -0.48
CRAT-201ENST00000318080 CRYGDP07320 174 aa12.08□□□□□ -0.48
CRAT-201ENST00000318080 NDUFV3P56181 108 aaKnown RBP12.08□□□□□ -0.48
CRAT-201ENST00000318080 UNQ9165/PRO28630Q6UXU0 137 aa12.08□□□□□ -0.48
CRAT-201ENST00000318080 VCX2Q9H322 139 aa12.08□□□□□ -0.48
CRAT-201ENST00000318080 IGKV3-7A0A075B6H7 116 aa12.07□□□□□ -0.48
CRAT-201ENST00000318080 GNRH2O43555 120 aa12.07□□□□□ -0.48
CRAT-201ENST00000318080 EIF4EBP3O60516 100 aaPredicted RBP12.07□□□□□ -0.48
CRAT-201ENST00000318080 MINOS1Q5TGZ0 78 aa12.07□□□□□ -0.48
CRAT-201ENST00000318080 GPHB5Q86YW7 130 aa12.07□□□□□ -0.48
CRAT-201ENST00000318080 MINOS1-NBL1R4GNA1 71 aa12.07□□□□□ -0.48
CRAT-201ENST00000318080 ANKRD17O75179 2603 aaKnown RBP12.07□□□□□ -0.48
CRAT-201ENST00000318080 TRAV12-1A0A0B4J245 112 aa12.07□□□□□ -0.48
CRAT-201ENST00000318080 A0A0J9YY99 117 aa12.07□□□□□ -0.48
CRAT-201ENST00000318080 ZFAND2AQ8N6M9 145 aa12.07□□□□□ -0.48
CRAT-201ENST00000318080 CUBNO60494 3623 aa12.07□□□□□ -0.48
CRAT-201ENST00000318080 IGHV3OR16-10A0A075B7F0 116 aa12.07□□□□□ -0.48
CRAT-201ENST00000318080 FAM159AQ6UWV7 190 aa12.07□□□□□ -0.48
CRAT-201ENST00000318080 JPT2Q9H910 190 aa12.07□□□□□ -0.48
CRAT-201ENST00000318080 HECTD1Q9ULT8 2610 aa12.06□□□□□ -0.48
CRAT-201ENST00000318080 TSHBP01222 138 aa12.06□□□□□ -0.48
CRAT-201ENST00000318080 TMEM170BQ5T4T1 132 aa12.06□□□□□ -0.48
CRAT-201ENST00000318080 OPRPNQ99935 248 aaPredicted RBP12.06□□□□□ -0.48
CRAT-201ENST00000318080 U3KQE9 123 aa12.06□□□□□ -0.48
CRAT-201ENST00000318080 OOSP1A8MZH6 123 aa12.06□□□□□ -0.48
CRAT-201ENST00000318080 EEF1AKMT3Q96AZ1 226 aa12.06□□□□□ -0.48
CRAT-201ENST00000318080 S100A4P26447 101 aaKnown RBP12.05□□□□□ -0.48
CRAT-201ENST00000318080 IGHV4-39P01824 125 aa12.05□□□□□ -0.48
CRAT-201ENST00000318080 ITPR2Q14571 2701 aa12.05□□□□□ -0.48
CRAT-201ENST00000318080 NAV2Q8IVL1 2488 aa12.04□□□□□ -0.48
CRAT-201ENST00000318080 SLC25A20O43772 301 aa12.04□□□□□ -0.48
CRAT-201ENST00000318080 RNASE4P34096 147 aaKnown RBP12.04□□□□□ -0.48
CRAT-201ENST00000318080 NTN5Q8WTR8 489 aaPredicted RBP12.04□□□□□ -0.48
CRAT-201ENST00000318080 IGLV4-69A0A075B6H9 119 aa12.04□□□□□ -0.48
CRAT-201ENST00000318080 ORMDL2Q53FV1 153 aa12.04□□□□□ -0.48
CRAT-201ENST00000318080 ZNF580Q9UK33 172 aa12.04□□□□□ -0.48
CRAT-201ENST00000318080 MUC4Q99102 2169 aa12.04□□□□□ -0.48
CRAT-201ENST00000318080 CENPVL3A0A0U1RRI6 287 aa12.03□□□□□ -0.48
CRAT-201ENST00000318080 IGHV3-30P01768 117 aa12.03□□□□□ -0.48
CRAT-201ENST00000318080 IGHV3-30-5P0DP03 117 aa12.03□□□□□ -0.48
CRAT-201ENST00000318080 TP53TG1Q9Y2A0 90 aa12.03□□□□□ -0.48
CRAT-201ENST00000318080 PHLDA3Q9Y5J5 127 aa12.03□□□□□ -0.48
CRAT-201ENST00000318080 RHODO00212 210 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms