RNA–Protein interactions for RNA: ENST00000316948.8

CACFD1-202, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACFD1, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-202ENST00000316948 CUBNO60494 3623 aa12.29□□□□□ -0.44
CACFD1-202ENST00000316948 CENPVL3A0A0U1RRI6 287 aa12.29□□□□□ -0.44
CACFD1-202ENST00000316948 NBL1P41271 181 aa12.29□□□□□ -0.44
CACFD1-202ENST00000316948 PMVKQ15126 192 aa12.29□□□□□ -0.44
CACFD1-202ENST00000316948 C9orf139Q6ZV77 190 aa12.29□□□□□ -0.44
CACFD1-202ENST00000316948 CRIP2P52943 208 aaPredicted RBP12.29□□□□□ -0.44
CACFD1-202ENST00000316948 TRPT1Q86TN4 253 aaKnown RBP12.29□□□□□ -0.44
CACFD1-202ENST00000316948 ITLN2Q8WWU7 325 aaPredicted RBP12.29□□□□□ -0.44
CACFD1-202ENST00000316948 LINC00477Q96M19 166 aa12.29□□□□□ -0.44
CACFD1-202ENST00000316948 U3KQE9 123 aa12.29□□□□□ -0.44
CACFD1-202ENST00000316948 TRBV7-1A0A0A6YYK4 115 aa12.28□□□□□ -0.44
CACFD1-202ENST00000316948 C9JAW5 83 aa12.28□□□□□ -0.44
CACFD1-202ENST00000316948 F5H697 171 aa12.28□□□□□ -0.44
CACFD1-202ENST00000316948 FLNCQ14315 2725 aa12.28□□□□□ -0.44
CACFD1-202ENST00000316948 A0A087WWL8 130 aa12.28□□□□□ -0.44
CACFD1-202ENST00000316948 IGIPA6NJ69 53 aa12.28□□□□□ -0.44
CACFD1-202ENST00000316948 RNASE3P12724 160 aaKnown RBP12.28□□□□□ -0.44
CACFD1-202ENST00000316948 UNQ9165/PRO28630Q6UXU0 137 aa12.28□□□□□ -0.44
CACFD1-202ENST00000316948 TMEM219Q86XT9 240 aa12.28□□□□□ -0.44
CACFD1-202ENST00000316948 SLC25A29Q8N8R3 303 aa12.28□□□□□ -0.44
CACFD1-202ENST00000316948 ZNRF2Q8NHG8 242 aa12.28□□□□□ -0.44
CACFD1-202ENST00000316948 SS18L2Q9UHA2 77 aa12.28□□□□□ -0.44
CACFD1-202ENST00000316948 UBE2E1P51965 193 aa12.27□□□□□ -0.44
CACFD1-202ENST00000316948 ZFAND6Q6FIF0 208 aa12.27□□□□□ -0.44
CACFD1-202ENST00000316948 LENEPQ9Y5L5 61 aa12.27□□□□□ -0.44
CACFD1-202ENST00000316948 IGHV3-64A0A075B6Q5 118 aa12.27□□□□□ -0.45
CACFD1-202ENST00000316948 SLC25A20O43772 301 aa12.27□□□□□ -0.45
CACFD1-202ENST00000316948 TEX29Q8N6K0 151 aa12.27□□□□□ -0.45
CACFD1-202ENST00000316948 PAPPA-AS1Q5QFB9 102 aa12.26□□□□□ -0.45
CACFD1-202ENST00000316948 SBSPONQ8IVN8 264 aa12.26□□□□□ -0.45
CACFD1-202ENST00000316948 A4D1N5 150 aa12.26□□□□□ -0.45
CACFD1-202ENST00000316948 J3QQQ9 107 aa12.26□□□□□ -0.45
CACFD1-202ENST00000316948 LGALS3P17931 250 aaKnown RBP12.26□□□□□ -0.45
CACFD1-202ENST00000316948 VCX2Q9H322 139 aa12.26□□□□□ -0.45
CACFD1-202ENST00000316948 CFAP46Q8IYW2 2715 aa12.26□□□□□ -0.45
CACFD1-202ENST00000316948 IGHV3OR16-10A0A075B7F0 116 aa12.25□□□□□ -0.45
CACFD1-202ENST00000316948 PPP1R17O96001 155 aa12.25□□□□□ -0.45
CACFD1-202ENST00000316948 TRBV12-3P01733 135 aa12.25□□□□□ -0.45
CACFD1-202ENST00000316948 OPRPNQ99935 248 aaPredicted RBP12.25□□□□□ -0.45
CACFD1-202ENST00000316948 TRAV2A0A0B4J234 112 aa12.24□□□□□ -0.45
CACFD1-202ENST00000316948 IGHV1-69DA0A0B4J2H0 117 aa12.24□□□□□ -0.45
CACFD1-202ENST00000316948 OVOL1O14753 267 aa12.24□□□□□ -0.45
CACFD1-202ENST00000316948 SUMO4Q6EEV6 95 aa12.24□□□□□ -0.45
CACFD1-202ENST00000316948 ZNF256Q9Y2P7 627 aaPredicted RBP12.24□□□□□ -0.45
CACFD1-202ENST00000316948 TMEM262E9PQX1 116 aa12.24□□□□□ -0.45
CACFD1-202ENST00000316948 FAM74A4Q5TZK3 123 aa12.24□□□□□ -0.45
CACFD1-202ENST00000316948 UBTD1Q9HAC8 227 aa12.24□□□□□ -0.45
CACFD1-202ENST00000316948 SRD5A1P18405 259 aa12.23□□□□□ -0.45
CACFD1-202ENST00000316948 LINC00315P59091 139 aa12.23□□□□□ -0.45
CACFD1-202ENST00000316948 Q1RN00 199 aa12.23□□□□□ -0.45
CACFD1-202ENST00000316948 BPESC1Q9GZL8 116 aa12.23□□□□□ -0.45
CACFD1-202ENST00000316948 BEX4Q9NWD9 120 aaPredicted RBP12.23□□□□□ -0.45
CACFD1-202ENST00000316948 MUC4Q99102 2169 aa12.23□□□□□ -0.45
CACFD1-202ENST00000316948 SDHAF1A6NFY7 115 aa12.23□□□□□ -0.45
CACFD1-202ENST00000316948 AMELXQ99217 191 aa12.23□□□□□ -0.45
CACFD1-202ENST00000316948 B5MCH6 92 aa12.22□□□□□ -0.45
CACFD1-202ENST00000316948 VCYO14598 125 aa12.22□□□□□ -0.45
CACFD1-202ENST00000316948 EIF4EBP3O60516 100 aaPredicted RBP12.22□□□□□ -0.45
CACFD1-202ENST00000316948 POLR2KP53803 58 aaKnown RBP12.22□□□□□ -0.45
CACFD1-202ENST00000316948 KLK9Q2XQG4 91 aa12.22□□□□□ -0.45
CACFD1-202ENST00000316948 C5orf56Q8N8D9 126 aa12.22□□□□□ -0.45
CACFD1-202ENST00000316948 KLK9Q9UKQ9 250 aa12.22□□□□□ -0.45
CACFD1-202ENST00000316948 KIF25-AS1Q9Y6Z4 181 aa12.22□□□□□ -0.45
CACFD1-202ENST00000316948 TMEM141Q96I45 108 aa12.22□□□□□ -0.45
CACFD1-202ENST00000316948 ABCA2Q9BZC7 2435 aa12.22□□□□□ -0.45
CACFD1-202ENST00000316948 PIEZO1Q92508 2521 aa12.21□□□□□ -0.45
CACFD1-202ENST00000316948 NPFFO15130 113 aa12.21□□□□□ -0.45
CACFD1-202ENST00000316948 IGHV3-11P01762 117 aa12.21□□□□□ -0.45
CACFD1-202ENST00000316948 IGHV4-39P01824 125 aa12.21□□□□□ -0.45
CACFD1-202ENST00000316948 ZNF876PQ49A33 203 aa12.21□□□□□ -0.45
CACFD1-202ENST00000316948 NTN5Q8WTR8 489 aaPredicted RBP12.21□□□□□ -0.45
CACFD1-202ENST00000316948 IGHV3-33P01772 117 aa12.21□□□□□ -0.46
CACFD1-202ENST00000316948 ELANEP08246 267 aa12.21□□□□□ -0.46
CACFD1-202ENST00000316948 KLRB1Q12918 225 aa12.21□□□□□ -0.46
CACFD1-202ENST00000316948 MUSTN1Q8IVN3 82 aa12.21□□□□□ -0.46
CACFD1-202ENST00000316948 TRAV41A0A0B4J266 112 aa12.2□□□□□ -0.46
CACFD1-202ENST00000316948 LMO4P61968 165 aa12.2□□□□□ -0.46
CACFD1-202ENST00000316948 SOCS3O14543 225 aa12.2□□□□□ -0.46
CACFD1-202ENST00000316948 MED14OSP0DP75 135 aa12.2□□□□□ -0.46
CACFD1-202ENST00000316948 TIMM17AQ99595 171 aa12.2□□□□□ -0.46
CACFD1-202ENST00000316948 IGHV4OR15-8A0A075B7B6 117 aa12.19□□□□□ -0.46
CACFD1-202ENST00000316948 A0A087WW49 117 aa12.19□□□□□ -0.46
CACFD1-202ENST00000316948 TRAV4A0A0B4J268 109 aa12.19□□□□□ -0.46
CACFD1-202ENST00000316948 CRLF1O75462 422 aa12.19□□□□□ -0.46
CACFD1-202ENST00000316948 GAGE5Q13069 117 aa12.19□□□□□ -0.46
CACFD1-202ENST00000316948 GAGE6Q13070 117 aa12.19□□□□□ -0.46
CACFD1-202ENST00000316948 FAM159AQ6UWV7 190 aa12.19□□□□□ -0.46
CACFD1-202ENST00000316948 CITED1Q99966 193 aa12.19□□□□□ -0.46
CACFD1-202ENST00000316948 SNCGO76070 127 aa12.19□□□□□ -0.46
CACFD1-202ENST00000316948 GAGE2BQ13066 116 aa12.19□□□□□ -0.46
CACFD1-202ENST00000316948 GAGE2EQ4V326 116 aa12.19□□□□□ -0.46
CACFD1-202ENST00000316948 TMEM263Q8WUH6 116 aaKnown RBP12.19□□□□□ -0.46
CACFD1-202ENST00000316948 GAGE2DQ9UEU5 116 aa12.19□□□□□ -0.46
CACFD1-202ENST00000316948 BRD3OSQ6XYD6 125 aa12.18□□□□□ -0.46
CACFD1-202ENST00000316948 ZNF580Q9UK33 172 aa12.18□□□□□ -0.46
CACFD1-202ENST00000316948 ZANQ9Y493 2812 aa12.18□□□□□ -0.46
CACFD1-202ENST00000316948 NHLRC4P0CG21 123 aaPredicted RBP12.18□□□□□ -0.46
CACFD1-202ENST00000316948 Q8N1Y9 231 aa12.18□□□□□ -0.46
CACFD1-202ENST00000316948 POM121L12Q8N7R1 296 aa12.18□□□□□ -0.46
CACFD1-202ENST00000316948 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms