RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 ICOSQ9Y6W8 199 aa13.19□□□□□ -0.3
CDCP1-201ENST00000296129 FREM1Q5H8C1 2179 aa13.19□□□□□ -0.3
CDCP1-201ENST00000296129 TRAV25A0A0B4J276 109 aa13.19□□□□□ -0.3
CDCP1-201ENST00000296129 SPART-AS1P0CW21 52 aa13.19□□□□□ -0.3
CDCP1-201ENST00000296129 RPL39P62891 51 aaKnown RBP13.19□□□□□ -0.3
CDCP1-201ENST00000296129 KIR2DL5BA0A0G2JN68 375 aa13.19□□□□□ -0.3
CDCP1-201ENST00000296129 KIR2DL5BA0A0G2JPC4 375 aa13.19□□□□□ -0.3
CDCP1-201ENST00000296129 DNAJC9-AS1A6NH13 148 aa13.19□□□□□ -0.3
CDCP1-201ENST00000296129 ATP5G1P05496 136 aa13.19□□□□□ -0.3
CDCP1-201ENST00000296129 MYCNOSP40205 109 aa13.19□□□□□ -0.3
CDCP1-201ENST00000296129 LINC01545Q5VT33 79 aa13.19□□□□□ -0.3
CDCP1-201ENST00000296129 AMTNQ6UX39 209 aa13.19□□□□□ -0.3
CDCP1-201ENST00000296129 KIR2DL5AQ8N109 375 aa13.19□□□□□ -0.3
CDCP1-201ENST00000296129 TNFRSF13BO14836 293 aaPredicted RBP13.18□□□□□ -0.3
CDCP1-201ENST00000296129 MUC6Q6W4X9 2439 aa13.18□□□□□ -0.3
CDCP1-201ENST00000296129 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.18□□□□□ -0.3
CDCP1-201ENST00000296129 A0A0J9YXV3 536 aa13.18□□□□□ -0.3
CDCP1-201ENST00000296129 LOXL1Q08397 574 aaPredicted RBP13.18□□□□□ -0.3
CDCP1-201ENST00000296129 IGLV10-54A0A075B6I4 117 aa13.17□□□□□ -0.3
CDCP1-201ENST00000296129 EIF4EBP1Q13541 118 aaPredicted RBP13.17□□□□□ -0.3
CDCP1-201ENST00000296129 ZNF295-AS1Q8N0V1 137 aa13.17□□□□□ -0.3
CDCP1-201ENST00000296129 MED14OSP0DP75 135 aa13.17□□□□□ -0.3
CDCP1-201ENST00000296129 ANKRD39Q53RE8 183 aa13.17□□□□□ -0.3
CDCP1-201ENST00000296129 ALPK3Q96L96 1907 aa13.17□□□□□ -0.3
CDCP1-201ENST00000296129 MRPL23Q16540 153 aaKnown RBP13.17□□□□□ -0.3
CDCP1-201ENST00000296129 BOD1L2Q8IYS8 172 aa13.16□□□□□ -0.3
CDCP1-201ENST00000296129 C19orf71A6NCJ1 209 aa13.16□□□□□ -0.3
CDCP1-201ENST00000296129 IGHV3-30P01768 117 aa13.16□□□□□ -0.3
CDCP1-201ENST00000296129 IGHV3-33P01772 117 aa13.16□□□□□ -0.3
CDCP1-201ENST00000296129 IGHV3-30-3P0DP02 117 aa13.16□□□□□ -0.3
CDCP1-201ENST00000296129 IGHV3-30-5P0DP03 117 aa13.16□□□□□ -0.3
CDCP1-201ENST00000296129 HERV-K104P63124 156 aa13.16□□□□□ -0.3
CDCP1-201ENST00000296129 TDRG1Q3Y452 100 aa13.16□□□□□ -0.3
CDCP1-201ENST00000296129 LURAP1LQ8IV03 231 aa13.16□□□□□ -0.3
CDCP1-201ENST00000296129 CLPSL1A2RUU4 121 aa13.16□□□□□ -0.3
CDCP1-201ENST00000296129 CFC1BP0CG36 223 aa13.16□□□□□ -0.3
CDCP1-201ENST00000296129 CFC1P0CG37 223 aa13.16□□□□□ -0.3
CDCP1-201ENST00000296129 Q6ZVH6 145 aa13.16□□□□□ -0.3
CDCP1-201ENST00000296129 TEX48A0A1B0GUV7 120 aa13.16□□□□□ -0.3
CDCP1-201ENST00000296129 TMEM61Q8N0U2 210 aa13.15□□□□□ -0.3
CDCP1-201ENST00000296129 MED13LQ71F56 2210 aa13.15□□□□□ -0.3
CDCP1-201ENST00000296129 TOMM6Q96B49 74 aa13.15□□□□□ -0.3
CDCP1-201ENST00000296129 CEP192Q8TEP8 1941 aa13.15□□□□□ -0.3
CDCP1-201ENST00000296129 PRSS47A8MTI9 375 aa13.15□□□□□ -0.3
CDCP1-201ENST00000296129 MDFICQ9P1T7 246 aa13.15□□□□□ -0.3
CDCP1-201ENST00000296129 A0A0J9YX75 114 aa13.15□□□□□ -0.3
CDCP1-201ENST00000296129 BAALCQ8WXS3 180 aa13.15□□□□□ -0.3
CDCP1-201ENST00000296129 C1orf43Q9BWL3 253 aa13.15□□□□□ -0.31
CDCP1-201ENST00000296129 DEFB4AO15263 64 aa13.14□□□□□ -0.31
CDCP1-201ENST00000296129 TRBV7-3A0A075B6L6 115 aa13.14□□□□□ -0.31
CDCP1-201ENST00000296129 HHLA3Q9XRX5 114 aa13.14□□□□□ -0.31
CDCP1-201ENST00000296129 DEFB135Q30KP9 77 aa13.14□□□□□ -0.31
CDCP1-201ENST00000296129 IGHV4-31P0DP07 118 aa13.13□□□□□ -0.31
CDCP1-201ENST00000296129 ABCA1O95477 2261 aa13.13□□□□□ -0.31
CDCP1-201ENST00000296129 TRAV4A0A0B4J268 109 aa13.13□□□□□ -0.31
CDCP1-201ENST00000296129 DSCR8Q96T75 97 aa13.13□□□□□ -0.31
CDCP1-201ENST00000296129 MAP6D1Q9H9H5 199 aa13.13□□□□□ -0.31
CDCP1-201ENST00000296129 NCOA6Q14686 2063 aaPredicted RBP13.13□□□□□ -0.31
CDCP1-201ENST00000296129 ZNF80P51504 273 aaPredicted RBP13.12□□□□□ -0.31
CDCP1-201ENST00000296129 PCNX3Q9H6A9 2034 aa13.12□□□□□ -0.31
CDCP1-201ENST00000296129 UBL5Q9BZL1 73 aa13.12□□□□□ -0.31
CDCP1-201ENST00000296129 TINCRA0A1B0GVN0 87 aa13.12□□□□□ -0.31
CDCP1-201ENST00000296129 RPL18AQ02543 176 aaKnown RBP13.12□□□□□ -0.31
CDCP1-201ENST00000296129 LRRC75A-AS1Q8N1F1 130 aa13.12□□□□□ -0.31
CDCP1-201ENST00000296129 TRAV12-1A0A0B4J245 112 aa13.11□□□□□ -0.31
CDCP1-201ENST00000296129 IGHG4P01861 327 aa13.11□□□□□ -0.31
CDCP1-201ENST00000296129 COX7A2LO14548 114 aa13.11□□□□□ -0.31
CDCP1-201ENST00000296129 CRYGBP07316 175 aa13.11□□□□□ -0.31
CDCP1-201ENST00000296129 MUSTN1Q8IVN3 82 aa13.11□□□□□ -0.31
CDCP1-201ENST00000296129 HAMPP81172 84 aa13.11□□□□□ -0.31
CDCP1-201ENST00000296129 RBMY1FQ15415 496 aaKnown RBP13.11□□□□□ -0.31
CDCP1-201ENST00000296129 COX7B2Q8TF08 81 aa13.11□□□□□ -0.31
CDCP1-201ENST00000296129 CCL25O15444 150 aa13.1□□□□□ -0.31
CDCP1-201ENST00000296129 Q6YL49 198 aa13.1□□□□□ -0.31
CDCP1-201ENST00000296129 IGLV2-8P01709 118 aa13.1□□□□□ -0.31
CDCP1-201ENST00000296129 LINC00322Q6ZN03 302 aaPredicted RBP13.1□□□□□ -0.31
CDCP1-201ENST00000296129 C11orf71Q6IPW1 123 aa13.1□□□□□ -0.31
CDCP1-201ENST00000296129 SH2D6Q7Z4S9 175 aa13.1□□□□□ -0.31
CDCP1-201ENST00000296129 DEFB125Q8N687 156 aa13.1□□□□□ -0.31
CDCP1-201ENST00000296129 EP400Q96L91 3159 aa13.1□□□□□ -0.31
CDCP1-201ENST00000296129 FSTL3O95633 263 aa13.1□□□□□ -0.31
CDCP1-201ENST00000296129 CAMK2N2Q96S95 79 aa13.1□□□□□ -0.31
CDCP1-201ENST00000296129 TTTY13Q9BZ97 58 aa13.09□□□□□ -0.31
CDCP1-201ENST00000296129 LY6LH3BQJ8 138 aa13.09□□□□□ -0.31
CDCP1-201ENST00000296129 NTN5Q8WTR8 489 aaPredicted RBP13.09□□□□□ -0.31
CDCP1-201ENST00000296129 IGF1P05019 195 aa13.09□□□□□ -0.31
CDCP1-201ENST00000296129 RPL32P62910 135 aaKnown RBP13.09□□□□□ -0.31
CDCP1-201ENST00000296129 UBE2BP63146 152 aa13.09□□□□□ -0.31
CDCP1-201ENST00000296129 TP53TG3Q9ULZ0 132 aa13.08□□□□□ -0.31
CDCP1-201ENST00000296129 F8W735 103 aaPredicted RBP13.08□□□□□ -0.32
CDCP1-201ENST00000296129 C10orf142B7Z368 130 aa13.08□□□□□ -0.32
CDCP1-201ENST00000296129 TMEM263Q8WUH6 116 aaKnown RBP13.08□□□□□ -0.32
CDCP1-201ENST00000296129 TNRC6AQ8NDV7 1962 aaKnown RBP13.08□□□□□ -0.32
CDCP1-201ENST00000296129 CCL18P55774 89 aa13.07□□□□□ -0.32
CDCP1-201ENST00000296129 WFDC11Q8NEX6 87 aa13.07□□□□□ -0.32
CDCP1-201ENST00000296129 TIMM17AQ99595 171 aa13.07□□□□□ -0.32
CDCP1-201ENST00000296129 IGLL5B9A064 214 aa13.07□□□□□ -0.32
CDCP1-201ENST00000296129 DAND5Q8N907 189 aa13.07□□□□□ -0.32
CDCP1-201ENST00000296129 DEFB105AQ8NG35 78 aa13.07□□□□□ -0.32
CDCP1-201ENST00000296129 PTPRSQ13332 1948 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms