RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 A0A0J9YY99 117 aa11.08□□□□□ -0.64
CCNF-201ENST00000293968 U3KQE9 123 aa11.08□□□□□ -0.64
CCNF-201ENST00000293968 CSPG4Q6UVK1 2322 aa11.08□□□□□ -0.64
CCNF-201ENST00000293968 C9JAW5 83 aa11.08□□□□□ -0.64
CCNF-201ENST00000293968 IGHV4-39P01824 125 aa11.08□□□□□ -0.64
CCNF-201ENST00000293968 ZNF688P0C7X2 276 aa11.08□□□□□ -0.64
CCNF-201ENST00000293968 PAPPA-AS1Q5QFB9 102 aa11.08□□□□□ -0.64
CCNF-201ENST00000293968 ADARB2-AS1A8MUL3 147 aa11.08□□□□□ -0.64
CCNF-201ENST00000293968 TSPEAR-AS2P59090 65 aa11.08□□□□□ -0.64
CCNF-201ENST00000293968 GPHB5Q86YW7 130 aa11.08□□□□□ -0.64
CCNF-201ENST00000293968 PPDPFLQ8WWR9 84 aa11.08□□□□□ -0.64
CCNF-201ENST00000293968 J3QQQ9 107 aa11.07□□□□□ -0.64
CCNF-201ENST00000293968 CRYGDP07320 174 aa11.07□□□□□ -0.64
CCNF-201ENST00000293968 EDN2P20800 178 aa11.07□□□□□ -0.64
CCNF-201ENST00000293968 FBXL19-AS1Q494R0 122 aa11.07□□□□□ -0.64
CCNF-201ENST00000293968 KLK9Q9UKQ9 250 aa11.07□□□□□ -0.64
CCNF-201ENST00000293968 NDUFA4O00483 81 aa11.06□□□□□ -0.64
CCNF-201ENST00000293968 TSHBP01222 138 aa11.06□□□□□ -0.64
CCNF-201ENST00000293968 PRO1854Q9UHT4 67 aa11.06□□□□□ -0.64
CCNF-201ENST00000293968 BSNQ9UPA5 3926 aa11.06□□□□□ -0.64
CCNF-201ENST00000293968 IGHV3-73A0A0B4J1V6 119 aa11.06□□□□□ -0.64
CCNF-201ENST00000293968 H3BUX3 64 aa11.06□□□□□ -0.64
CCNF-201ENST00000293968 CFC1BP0CG36 223 aa11.06□□□□□ -0.64
CCNF-201ENST00000293968 CFC1P0CG37 223 aa11.06□□□□□ -0.64
CCNF-201ENST00000293968 AJUBAQ96IF1 538 aa11.06□□□□□ -0.64
CCNF-201ENST00000293968 IGLV4-69A0A075B6H9 119 aa11.06□□□□□ -0.64
CCNF-201ENST00000293968 UBE2D1P51668 147 aa11.06□□□□□ -0.64
CCNF-201ENST00000293968 XGP55808 180 aa11.06□□□□□ -0.64
CCNF-201ENST00000293968 BLCAPP62952 87 aa11.06□□□□□ -0.64
CCNF-201ENST00000293968 TRPT1Q86TN4 253 aaKnown RBP11.06□□□□□ -0.64
CCNF-201ENST00000293968 ANKRD29Q8N6D5 301 aa11.06□□□□□ -0.64
CCNF-201ENST00000293968 A4D1N5 150 aa11.05□□□□□ -0.64
CCNF-201ENST00000293968 NPC2P61916 151 aa11.05□□□□□ -0.64
CCNF-201ENST00000293968 TEN1Q86WV5 123 aa11.05□□□□□ -0.64
CCNF-201ENST00000293968 ID1P41134 155 aa11.05□□□□□ -0.64
CCNF-201ENST00000293968 ZNRF2Q8NHG8 242 aa11.05□□□□□ -0.64
CCNF-201ENST00000293968 RNF223E7ERA6 249 aa11.05□□□□□ -0.64
CCNF-201ENST00000293968 LINC01619G3V211 115 aa11.05□□□□□ -0.64
CCNF-201ENST00000293968 Q6ZUT4 128 aa11.05□□□□□ -0.64
CCNF-201ENST00000293968 C10orf126Q8N4M7 172 aa11.05□□□□□ -0.64
CCNF-201ENST00000293968 COX6B1P14854 86 aa11.04□□□□□ -0.64
CCNF-201ENST00000293968 CDIP1Q9H305 208 aa11.04□□□□□ -0.64
CCNF-201ENST00000293968 ERG28Q9UKR5 140 aa11.04□□□□□ -0.64
CCNF-201ENST00000293968 NCOR2Q9Y618 2525 aa11.04□□□□□ -0.64
CCNF-201ENST00000293968 CRYBA4P53673 196 aa11.04□□□□□ -0.64
CCNF-201ENST00000293968 LMO4P61968 165 aa11.04□□□□□ -0.64
CCNF-201ENST00000293968 KLRB1Q12918 225 aa11.03□□□□□ -0.64
CCNF-201ENST00000293968 SPXQ9BT56 116 aa11.03□□□□□ -0.64
CCNF-201ENST00000293968 MDFICQ9P1T7 246 aa11.03□□□□□ -0.64
CCNF-201ENST00000293968 RNASE13Q5GAN3 156 aaKnown RBP11.03□□□□□ -0.64
CCNF-201ENST00000293968 TMEM141Q96I45 108 aa11.03□□□□□ -0.64
CCNF-201ENST00000293968 DAZ1Q9NQZ3 744 aaKnown RBP11.03□□□□□ -0.64
CCNF-201ENST00000293968 HIVEP3Q5T1R4 2406 aa11.03□□□□□ -0.64
CCNF-201ENST00000293968 HRNRQ86YZ3 2850 aaPredicted RBP11.03□□□□□ -0.64
CCNF-201ENST00000293968 IGHV3-30P01768 117 aa11.03□□□□□ -0.64
CCNF-201ENST00000293968 IGHV3-30-5P0DP03 117 aa11.03□□□□□ -0.64
CCNF-201ENST00000293968 TMEM95Q3KNT9 176 aa11.03□□□□□ -0.64
CCNF-201ENST00000293968 CARD19Q96LW7 228 aa11.03□□□□□ -0.64
CCNF-201ENST00000293968 IGIPA6NJ69 53 aa11.02□□□□□ -0.64
CCNF-201ENST00000293968 SLC25A20O43772 301 aa11.02□□□□□ -0.64
CCNF-201ENST00000293968 VCX2Q9H322 139 aa11.02□□□□□ -0.64
CCNF-201ENST00000293968 TRBV20-1A0A075B6N2 111 aa11.02□□□□□ -0.65
CCNF-201ENST00000293968 FHL3Q13643 280 aa11.02□□□□□ -0.65
CCNF-201ENST00000293968 SPINK13Q1W4C9 94 aa11.02□□□□□ -0.65
CCNF-201ENST00000293968 ANAPC13Q9BS18 74 aa11.02□□□□□ -0.65
CCNF-201ENST00000293968 IGHV1-69DA0A0B4J2H0 117 aa11.02□□□□□ -0.65
CCNF-201ENST00000293968 NOTCH3Q9UM47 2321 aa11.02□□□□□ -0.65
CCNF-201ENST00000293968 A0A0J9YXV3 536 aa11.02□□□□□ -0.65
CCNF-201ENST00000293968 IGHV4-38-2P0DP08 117 aa11.02□□□□□ -0.65
CCNF-201ENST00000293968 SLC25A29Q8N8R3 303 aa11.02□□□□□ -0.65
CCNF-201ENST00000293968 ATP6V0E2Q8NHE4 81 aa11.02□□□□□ -0.65
CCNF-201ENST00000293968 UBE2D3P61077 147 aa11.01□□□□□ -0.65
CCNF-201ENST00000293968 UBE2D2P62837 147 aa11.01□□□□□ -0.65
CCNF-201ENST00000293968 ZNF876PQ49A33 203 aa11.01□□□□□ -0.65
CCNF-201ENST00000293968 IGHV1-69P01742 117 aa11.01□□□□□ -0.65
CCNF-201ENST00000293968 MUSTN1Q8IVN3 82 aa11.01□□□□□ -0.65
CCNF-201ENST00000293968 SOCS3O14543 225 aa11.01□□□□□ -0.65
CCNF-201ENST00000293968 TCTEX1D4Q5JR98 221 aa11.01□□□□□ -0.65
CCNF-201ENST00000293968 CRIP2P52943 208 aaPredicted RBP11□□□□□ -0.65
CCNF-201ENST00000293968 DUX5Q96PT3 197 aa11□□□□□ -0.65
CCNF-201ENST00000293968 POLR2KP53803 58 aaKnown RBP11□□□□□ -0.65
CCNF-201ENST00000293968 TEX29Q8N6K0 151 aa11□□□□□ -0.65
CCNF-201ENST00000293968 ZNF580Q9UK33 172 aa11□□□□□ -0.65
CCNF-201ENST00000293968 CHD8Q9HCK8 2581 aa11□□□□□ -0.65
CCNF-201ENST00000293968 USMG5Q96IX5 58 aa10.99□□□□□ -0.65
CCNF-201ENST00000293968 MUC4Q99102 2169 aa10.99□□□□□ -0.65
CCNF-201ENST00000293968 MED14OSP0DP75 135 aa10.99□□□□□ -0.65
CCNF-201ENST00000293968 LINC00315P59091 139 aa10.99□□□□□ -0.65
CCNF-201ENST00000293968 NTN5Q8WTR8 489 aaPredicted RBP10.99□□□□□ -0.65
CCNF-201ENST00000293968 RNF183Q96D59 192 aa10.99□□□□□ -0.65
CCNF-201ENST00000293968 TIMM17AQ99595 171 aa10.99□□□□□ -0.65
CCNF-201ENST00000293968 LY6DQ14210 128 aa10.98□□□□□ -0.65
CCNF-201ENST00000293968 ZFAND6Q6FIF0 208 aa10.98□□□□□ -0.65
CCNF-201ENST00000293968 CD28P10747 220 aa10.98□□□□□ -0.65
CCNF-201ENST00000293968 Q8N1Y9 231 aa10.98□□□□□ -0.65
CCNF-201ENST00000293968 KIF25-AS1Q9Y6Z4 181 aa10.98□□□□□ -0.65
CCNF-201ENST00000293968 KNCNA6PVL3 124 aa10.98□□□□□ -0.65
CCNF-201ENST00000293968 CEMP1Q6PRD7 247 aaPredicted RBP10.98□□□□□ -0.65
CCNF-201ENST00000293968 SNCGO76070 127 aa10.97□□□□□ -0.65
CCNF-201ENST00000293968 SNRPD3P62318 126 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 305.2 ms